BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os03g0746500 Os03g0746500|AK101069
         (579 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G14790.1  | chr4:8496351-8499829 REVERSE LENGTH=572            734   0.0  
AT5G39840.1  | chr5:15946769-15949186 FORWARD LENGTH=777          411   e-115

>AT4G14790.1 | chr4:8496351-8499829 REVERSE LENGTH=572
          Length = 571

 Score =  734 bits (1895), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 349/489 (71%), Positives = 417/489 (85%)

Query: 51  GYHNSGKFDLTDLTHPHIWYPNAREKKRNVFLHVGPTNSGKTHNALKRLEASSSGVYCGP 110
           G   + KFD TDLT PH WYP AR+KKR V LHVGPTNSGKT++ALK LE SSSGVYCGP
Sbjct: 62  GTGTTSKFDFTDLTCPHTWYPIARKKKRKVILHVGPTNSGKTYSALKHLEQSSSGVYCGP 121

Query: 111 LRLLAREVAQRLNKANVPCNLITGQEREEIEGAKHSSVTVEMADMTTEYQCAVIDEIQMV 170
           LRLLA EVA+RLNKANVPC+LITGQE++ +EGA H +VTVEMAD+T+ Y CA+IDEIQMV
Sbjct: 122 LRLLAWEVAKRLNKANVPCDLITGQEKDLVEGATHKAVTVEMADVTSVYDCAIIDEIQMV 181

Query: 171 GCRSRGFSFTRALLGLCSDELHVCGDPAVVPLIQRILEPTGDVVTVQYYERLSPLVPLKT 230
           GC+ RGF+FTRALLG+ +DELH+CGDPAVVPL++ IL+ TGD V V  YERLSPLVPLK 
Sbjct: 182 GCKQRGFAFTRALLGIAADELHLCGDPAVVPLVEDILKVTGDDVEVHTYERLSPLVPLKV 241

Query: 231 TLGSFSNIKAGDCVVTFSRRSIYMLKRRIEMGGKHLCSVVYGSLPPETRTKQATMFNDQD 290
            + S S+IK GDC+VTFSR+ IY  K+ IE  GKHLCSVVYGSLPPETRT QAT FND+ 
Sbjct: 242 PVSSVSSIKTGDCLVTFSRKDIYAYKKTIERAGKHLCSVVYGSLPPETRTAQATRFNDET 301

Query: 291 SNLNVLVASDAIGMGLNLNISRIIFSTLEKFDGICNRELTVAEIKQIAGRAGRYGSKFPV 350
           ++ +VLVASDAIGMGLNLNISRIIFSTL+K+DG   R+LTV+EIKQIAGRAGR+ SKFP+
Sbjct: 302 NDFDVLVASDAIGMGLNLNISRIIFSTLQKYDGSETRDLTVSEIKQIAGRAGRFQSKFPI 361

Query: 351 GEVTCLNSDHLPLLHSALKSPSPIIERAGLFPTFDVLSLYSRLHGTDFFQPILERFLDKA 410
           GEVTCL+ + LPLLHS+LKSPSPI+ERAGLFPTFD+LS YS+ H T     ILE F++ A
Sbjct: 362 GEVTCLHKEDLPLLHSSLKSPSPILERAGLFPTFDLLSGYSQAHPTHGLYQILEHFVENA 421

Query: 411 KLSPDYFIADCEDMLKVAAIVDELPLGLYDKYLFCLSPVDIRDDISTKGLIQFAENYAKK 470
           KLS +YFI++ EDM+KVAAIVDELPLGL +KYLF +SPVD+ D+IS +GL QFA+N++K 
Sbjct: 422 KLSSNYFISNVEDMMKVAAIVDELPLGLQEKYLFVVSPVDVNDEISGQGLAQFAQNFSKA 481

Query: 471 GIVRLKEIFTPGTLQVPKSHNQLKELESIHKVLELYVWLSFRLEDSYPDRELAASQKSIC 530
           GIVRL+EI  P  ++VPK+  +LKELESIHKVL+LYVWLS RLEDS+PDRE+AASQKSIC
Sbjct: 482 GIVRLREILAPDRVKVPKTPTELKELESIHKVLDLYVWLSLRLEDSFPDREVAASQKSIC 541

Query: 531 SMLIEEYLE 539
           ++LIE++LE
Sbjct: 542 NLLIEQFLE 550



>AT5G39840.1 | chr5:15946769-15949186 FORWARD LENGTH=777
          Length = 776

 Score =  411 bits (1057), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 209/498 (41%), Positives = 317/498 (63%), Gaps = 13/498 (2%)

Query: 59  DLTDLTHPHIWYPNAREKKRNVFLHVGPTNSGKTHNALKRLEASSSGVYCGPLRLLAREV 118
           D  DLT P  W+P AR  KR +  H GPTNSGKT+NAL+R   + +G+YC PLRLLA EV
Sbjct: 255 DTADLTKPATWFPFARAMKRKIVYHCGPTNSGKTYNALQRFMEAKNGLYCSPLRLLAMEV 314

Query: 119 AQRLNKANVPCNLITGQEREEIEGAKHSSVTVEMADMTTEYQCAVIDEIQMVGCRSRGFS 178
             ++N   + C+L+TGQE++ +  A H S TVEM      Y+ AV+DEIQM+   SRG +
Sbjct: 315 FDKVNALGIYCSLLTGQEKKYVPFANHVSCTVEMVSTDELYEVAVLDEIQMMADPSRGHA 374

Query: 179 FTRALLGLCSDELHVCGDPAVVPLIQRILEPTGDVVTVQYYERLSPLV-PLKTTLGSFSN 237
           +T+ALLGL +DE+H+CGDP+V+ +++++   TGD +  ++YER  PLV   KT LG   N
Sbjct: 375 WTKALLGLKADEIHLCGDPSVLDIVRKMCADTGDELVEEHYERFKPLVVEAKTLLGELKN 434

Query: 238 IKAGDCVVTFSRRSIYMLKRRIEMGGKHLCSVVYGSLPPETRTKQATMFNDQDSNLNVLV 297
           +K+GDCVV FSRR I+ +K  IE    H C V+YG+LPPETR +QA +FNDQ++  +VLV
Sbjct: 435 VKSGDCVVAFSRREIFEVKMAIEKHTNHRCCVIYGALPPETRRQQAKLFNDQENEYDVLV 494

Query: 298 ASDAIGMGLNLNISRIIFSTLEKFDGICNRELTVAEIKQIAGRAGRYGSKFPVGEVTCLN 357
           ASDA+GMGLNLNI R++F +L K++G     +  +++KQIAGRAGR GS++P G  T L+
Sbjct: 495 ASDAVGMGLNLNIRRVVFYSLNKYNGDKIVPVAASQVKQIAGRAGRRGSRYPDGLTTTLH 554

Query: 358 SDHLPLLHSALKSPSPIIERAGLFPTFDVLSLYSRLHGTDFFQPILERFLDKAKLSPDYF 417
            + L  L   L+ P   + + GLFP F+ + L++       F  +LE F    +L   YF
Sbjct: 555 LEDLNYLIECLQQPFDEVTKVGLFPFFEQIELFAAQVPDMAFSNLLEHFGKHCRLDGSYF 614

Query: 418 IADCEDMLKVAAIVDELP-LGLYDKYLFCLSPVDIRDDISTKGLIQFAENYAKKGIVRLK 476
           +   + + KVA +++++  L L D++ FC +PV+IR+  +   L +FA +Y++   V + 
Sbjct: 615 LCRHDHVKKVANMLEKVEGLSLEDRFNFCFAPVNIRNPRAMHNLYRFASSYSQNMPVNV- 673

Query: 477 EIFTPGTLQVP----KSHNQLKELESIHKVLELYVWLSFRLEDSYPDRELAASQKSICSM 532
                  + +P    KS  QL +LES H++L +Y+WLS + E+++P  E   +  +  + 
Sbjct: 674 ------AMGIPKSSAKSDAQLLDLESRHQILSMYLWLSNQFEENFPFVEKVEAMATNIAE 727

Query: 533 LIEEYLERSGWQQNGRKD 550
           L+ E L ++ W+   +++
Sbjct: 728 LLGESLSKASWKMESKEE 745



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.321    0.137    0.409 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 12,634,404
Number of extensions: 555388
Number of successful extensions: 1198
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 1196
Number of HSP's successfully gapped: 2
Length of query: 579
Length of database: 11,106,569
Length adjustment: 104
Effective length of query: 475
Effective length of database: 8,255,305
Effective search space: 3921269875
Effective search space used: 3921269875
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 114 (48.5 bits)