BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0743900 Os03g0743900|AK099593
(477 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G22890.1 | chr3:8112837-8114734 FORWARD LENGTH=464 649 0.0
AT4G14680.1 | chr4:8413443-8415311 REVERSE LENGTH=466 646 0.0
AT5G43780.1 | chr5:17589631-17591480 REVERSE LENGTH=470 643 0.0
AT1G19920.1 | chr1:6914835-6916657 REVERSE LENGTH=477 615 e-176
>AT3G22890.1 | chr3:8112837-8114734 FORWARD LENGTH=464
Length = 463
Score = 649 bits (1675), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 316/418 (75%), Positives = 353/418 (84%), Gaps = 6/418 (1%)
Query: 58 LIEPDGGRLVELVVPXXXXXXXXXXXXXXXLAHRVRLGRVETEWLHVLSEGWASPLRGFM 117
LI PDGG+LVEL+V RV L ++ +W+HVLSEGWASPL GFM
Sbjct: 50 LIAPDGGKLVELIVEEPKRREKKHEAADLP---RVELTAIDLQWMHVLSEGWASPLGGFM 106
Query: 118 REAEFLQALHFNAIRGGDGAMVNMSVPIVLPLGDAQRRAIEASGXXXXXXXXXXXXPLAV 177
RE+EFLQ LHFN++R DG++VNMSVPIVL + D Q+ I S P+A+
Sbjct: 107 RESEFLQTLHFNSLRLDDGSVVNMSVPIVLAIDDEQKARIGES--TRVALFNSDGNPVAI 164
Query: 178 LSDIEIYKHNKEERIARTWGTTAPGLPYVDEAITNAGDWLIGGDLEVIEPIKYNDGLDQY 237
LSDIEIYKH KEERIARTWGTTAPGLPYVDEAITNAG+WLIGGDLEV+EP+KYNDGLD++
Sbjct: 165 LSDIEIYKHPKEERIARTWGTTAPGLPYVDEAITNAGNWLIGGDLEVLEPVKYNDGLDRF 224
Query: 238 RLSPAQLREEFARRNADAVFAFQLRNPVHNGHALLMTDTRKRLLEMGYKNPVLLLHPLGG 297
RLSPA+LR+E +RNADAVFAFQLRNPVHNGHALLMTDTR+RLLEMGYKNP+LLLHPLGG
Sbjct: 225 RLSPAELRKELEKRNADAVFAFQLRNPVHNGHALLMTDTRRRLLEMGYKNPILLLHPLGG 284
Query: 298 FTKADDVPLSWRMKQHEKVLEEGVLNPESTVVAIFPSPMHYAGPTEVQWHAKARINAGAN 357
FTKADDVPL WRMKQHEKVLE+GVL+PE+TVV+IFPSPMHYAGPTEVQWHAKARINAGAN
Sbjct: 285 FTKADDVPLDWRMKQHEKVLEDGVLDPETTVVSIFPSPMHYAGPTEVQWHAKARINAGAN 344
Query: 358 FYIVGRDPAGMGHPTEKRDLYDADHGKKVLSMAPGLEKLNILPFKVAAYDTKQKKMDFFD 417
FYIVGRDPAGMGHP EKRDLYDADHGKKVLSMAPGLE+LNILPF+VAAYD Q KM FFD
Sbjct: 345 FYIVGRDPAGMGHPVEKRDLYDADHGKKVLSMAPGLERLNILPFRVAAYDKTQGKMAFFD 404
Query: 418 PSRKDDFLFISGTKMRTLAKNCQSPPDGFMCPGGWKVLVEYYDSLTPSADSSKLREAV 475
PSR DFLFISGTKMRTLAKN ++PPDGFMCPGGWKVLV+YY+SLTP A + +L E V
Sbjct: 405 PSRPQDFLFISGTKMRTLAKNNENPPDGFMCPGGWKVLVDYYESLTP-AGNGRLPEVV 461
>AT4G14680.1 | chr4:8413443-8415311 REVERSE LENGTH=466
Length = 465
Score = 646 bits (1666), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 314/418 (75%), Positives = 352/418 (84%), Gaps = 6/418 (1%)
Query: 58 LIEPDGGRLVELVVPXXXXXXXXXXXXXXXLAHRVRLGRVETEWLHVLSEGWASPLRGFM 117
LIEPDGG+LV+LVVP RVRL ++ +W+HVLSEGWASPLRGFM
Sbjct: 52 LIEPDGGKLVDLVVPEPRRREKKHEAADLP---RVRLTAIDLQWMHVLSEGWASPLRGFM 108
Query: 118 REAEFLQALHFNAIRGGDGAMVNMSVPIVLPLGDAQRRAIEASGXXXXXXXXXXXXPLAV 177
RE+EFLQ LHFN + DG++VNMSVPIVL + D Q+ I S P+A+
Sbjct: 109 RESEFLQTLHFNLLNLDDGSVVNMSVPIVLAIDDQQKALIGES--KRVSLVDSDDNPIAI 166
Query: 178 LSDIEIYKHNKEERIARTWGTTAPGLPYVDEAITNAGDWLIGGDLEVIEPIKYNDGLDQY 237
L+DIEIYKH KEERIARTWGTTAPGLPYV+EAITNAGDWLIGGDLEV+EP+KYNDGLD++
Sbjct: 167 LNDIEIYKHPKEERIARTWGTTAPGLPYVEEAITNAGDWLIGGDLEVLEPVKYNDGLDRF 226
Query: 238 RLSPAQLREEFARRNADAVFAFQLRNPVHNGHALLMTDTRKRLLEMGYKNPVLLLHPLGG 297
RLSP +LR+E +R ADAVFAFQLRNPVHNGHALLMTDTR+RLLEMGYKNP+LLLHPLGG
Sbjct: 227 RLSPFELRKELEKRGADAVFAFQLRNPVHNGHALLMTDTRRRLLEMGYKNPILLLHPLGG 286
Query: 298 FTKADDVPLSWRMKQHEKVLEEGVLNPESTVVAIFPSPMHYAGPTEVQWHAKARINAGAN 357
FTKADDVPLSWRMKQHEKVLE+GVL+PE+TVV+IFPSPM YAGPTEVQWHAKARINAGAN
Sbjct: 287 FTKADDVPLSWRMKQHEKVLEDGVLDPETTVVSIFPSPMLYAGPTEVQWHAKARINAGAN 346
Query: 358 FYIVGRDPAGMGHPTEKRDLYDADHGKKVLSMAPGLEKLNILPFKVAAYDTKQKKMDFFD 417
FYIVGRDPAGMGHP EKRDLYDADHGKKVLSMAPGLE+LNILPF+VAAYD Q KM FFD
Sbjct: 347 FYIVGRDPAGMGHPVEKRDLYDADHGKKVLSMAPGLERLNILPFRVAAYDKTQGKMAFFD 406
Query: 418 PSRKDDFLFISGTKMRTLAKNCQSPPDGFMCPGGWKVLVEYYDSLTPSADSSKLREAV 475
PSR DFLFISGTKMR LAKN ++PPDGFMCPGGWKVLV+YYDSLT + + +KL E +
Sbjct: 407 PSRAQDFLFISGTKMRALAKNRENPPDGFMCPGGWKVLVDYYDSLTLTGN-TKLPEKI 463
>AT5G43780.1 | chr5:17589631-17591480 REVERSE LENGTH=470
Length = 469
Score = 643 bits (1659), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 311/420 (74%), Positives = 352/420 (83%), Gaps = 4/420 (0%)
Query: 58 LIEPDGGRLVELVVPXXXXXXXXXXXXXXXLAHRVRLGRVETEWLHVLSEGWASPLRGFM 117
LIEPDGG+L+ LVV + R++L RV+ EW+HVLSEGWASPL+GFM
Sbjct: 53 LIEPDGGKLMNLVV--EESRRRVMKHEAETVPARIKLNRVDLEWVHVLSEGWASPLKGFM 110
Query: 118 REAEFLQALHFNAIRGGDGAMVNMSVPIVLPLGDAQRRAIEASGXXXXXXXXXXXXPLAV 177
R++EFLQ LHFN+ R DG++VNMSVPIVL + D Q+ I S P+A+
Sbjct: 111 RQSEFLQTLHFNSFRLEDGSVVNMSVPIVLAIDDDQKFRIGDSNQVTLVDSVGN--PIAI 168
Query: 178 LSDIEIYKHNKEERIARTWGTTAPGLPYVDEAITNAGDWLIGGDLEVIEPIKYNDGLDQY 237
L+DIEIYKH KEERIARTWGTTA GLPY +EAIT AG+WLIGGDL+V+EPIKYNDGLD++
Sbjct: 169 LNDIEIYKHPKEERIARTWGTTARGLPYAEEAITKAGNWLIGGDLQVLEPIKYNDGLDRF 228
Query: 238 RLSPAQLREEFARRNADAVFAFQLRNPVHNGHALLMTDTRKRLLEMGYKNPVLLLHPLGG 297
RLSP+QLREEF RR ADAVFAFQLRNPVHNGHALLMTDTR+RLLEMGYKNPVLLL+PLGG
Sbjct: 229 RLSPSQLREEFIRRGADAVFAFQLRNPVHNGHALLMTDTRRRLLEMGYKNPVLLLNPLGG 288
Query: 298 FTKADDVPLSWRMKQHEKVLEEGVLNPESTVVAIFPSPMHYAGPTEVQWHAKARINAGAN 357
FTKADDVPLSWRM+QHEKVLE+GVL+PE+TVV+IFPSPM YAGPTEVQWHAKARINAGAN
Sbjct: 289 FTKADDVPLSWRMRQHEKVLEDGVLDPETTVVSIFPSPMLYAGPTEVQWHAKARINAGAN 348
Query: 358 FYIVGRDPAGMGHPTEKRDLYDADHGKKVLSMAPGLEKLNILPFKVAAYDTKQKKMDFFD 417
FYIVGRDPAGMGHPTEKRDLYDADHGKKVLSMAPGLE+LNILPFKVAAYD Q KM FFD
Sbjct: 349 FYIVGRDPAGMGHPTEKRDLYDADHGKKVLSMAPGLERLNILPFKVAAYDKTQGKMAFFD 408
Query: 418 PSRKDDFLFISGTKMRTLAKNCQSPPDGFMCPGGWKVLVEYYDSLTPSADSSKLREAVAA 477
PSR DFLFISGTKMR LAK ++PPDGFMCP GWKVLV+YYDSL+ + ++ EAVA+
Sbjct: 409 PSRSQDFLFISGTKMRGLAKKKENPPDGFMCPSGWKVLVDYYDSLSAETGNGRVSEAVAS 468
>AT1G19920.1 | chr1:6914835-6916657 REVERSE LENGTH=477
Length = 476
Score = 615 bits (1587), Expect = e-176, Method: Compositional matrix adjust.
Identities = 293/409 (71%), Positives = 334/409 (81%), Gaps = 5/409 (1%)
Query: 57 SLIEPDGGRLVELVVPXXXXXXXXXXXXXXXLAHRVRLGRVETEWLHVLSEGWASPLRGF 116
SLI+PDGG LVEL+VP +V+L +++ EW+HV+SEGWASPL+GF
Sbjct: 63 SLIDPDGGELVELIVPETEIGVKKAESETMP---KVKLNQIDLEWVHVISEGWASPLKGF 119
Query: 117 MREAEFLQALHFNAIRGGDGAMVNMSVPIVLPLGDAQRRAIEASGXXXXXXXXXXXXPLA 176
MRE E+LQ+LHFN++R +G VNMS+PIVL + D + I +S +
Sbjct: 120 MREDEYLQSLHFNSLRLKNGTFVNMSLPIVLAIDDDTKEQIGSSENVALVCPQGDI--IG 177
Query: 177 VLSDIEIYKHNKEERIARTWGTTAPGLPYVDEAITNAGDWLIGGDLEVIEPIKYNDGLDQ 236
L +EIYKHNKEERIARTWGTT+PGLPYV+E IT +G+WLIGGDLEV EPIKYNDGLD
Sbjct: 178 SLRSVEIYKHNKEERIARTWGTTSPGLPYVEEYITPSGNWLIGGDLEVFEPIKYNDGLDH 237
Query: 237 YRLSPAQLREEFARRNADAVFAFQLRNPVHNGHALLMTDTRKRLLEMGYKNPVLLLHPLG 296
YRLSP QLREEF R ADAVFAFQLRNPVHNGHALLM DTRKRLLEMGYKNPVLLLHPLG
Sbjct: 238 YRLSPKQLREEFDNRQADAVFAFQLRNPVHNGHALLMNDTRKRLLEMGYKNPVLLLHPLG 297
Query: 297 GFTKADDVPLSWRMKQHEKVLEEGVLNPESTVVAIFPSPMHYAGPTEVQWHAKARINAGA 356
GFTKADDVPL RM+QH KVLE+GVL+P++T+V+IFPSPMHYAGPTEVQWHAKARINAGA
Sbjct: 298 GFTKADDVPLDVRMEQHSKVLEDGVLDPKTTIVSIFPSPMHYAGPTEVQWHAKARINAGA 357
Query: 357 NFYIVGRDPAGMGHPTEKRDLYDADHGKKVLSMAPGLEKLNILPFKVAAYDTKQKKMDFF 416
NFYIVGRDPAGMGHPTEKRDLYD DHGK+VLSMAPGLEKLNILPF+VAAYDT +KKM FF
Sbjct: 358 NFYIVGRDPAGMGHPTEKRDLYDPDHGKRVLSMAPGLEKLNILPFRVAAYDTIEKKMAFF 417
Query: 417 DPSRKDDFLFISGTKMRTLAKNCQSPPDGFMCPGGWKVLVEYYDSLTPS 465
DPSR +FLFISGTKMRT A+ ++PPDGFMCP GW VLV+YY+SL S
Sbjct: 418 DPSRAKEFLFISGTKMRTYARTGENPPDGFMCPSGWNVLVKYYESLQES 466
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.319 0.137 0.418
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 9,229,119
Number of extensions: 383742
Number of successful extensions: 709
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 701
Number of HSP's successfully gapped: 4
Length of query: 477
Length of database: 11,106,569
Length adjustment: 102
Effective length of query: 375
Effective length of database: 8,310,137
Effective search space: 3116301375
Effective search space used: 3116301375
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 114 (48.5 bits)