BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os03g0740700 Os03g0740700|AK102723
         (759 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G56290.1  | chr1:21075939-21078608 FORWARD LENGTH=693          573   e-163
AT5G56900.2  | chr5:23019750-23022670 REVERSE LENGTH=597           77   3e-14

>AT1G56290.1 | chr1:21075939-21078608 FORWARD LENGTH=693
          Length = 692

 Score =  573 bits (1476), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 304/633 (48%), Positives = 400/633 (63%), Gaps = 27/633 (4%)

Query: 146 LRASDIVRKEMGLEWMLKSASSGRAESSQAGGXXXXXXXXXXXXXXXXNPKELNPYLRDN 205
           L   DIVRK+MGL+WML      R                        NP+ELNPYL++N
Sbjct: 68  LLEGDIVRKKMGLDWMLPPT---RKADPNPASDVEDKFEESAPEVTKVNPRELNPYLKEN 124

Query: 206 GSGYPDESSPSNAG-NQLLASSVVGDGGASWRLKALKRAKEQAAREGKQLEEVVGERWGS 264
           G+GYP+E S    G +QLL SSVVGDGGASWR+KALKRAKEQAAREG +LEEV GER+GS
Sbjct: 125 GTGYPEEESEKKHGKDQLLPSSVVGDGGASWRMKALKRAKEQAAREGLRLEEVAGERYGS 184

Query: 265 LGXXXXXXXXXXXXXXXXXXXXIRGRKAGQAGSSEEHSKENPKEGQQGGDSGRREYLKDV 324
           LG                    I  R+ G+   ++   K   +  ++G +   REYLK  
Sbjct: 185 LGNLVESVASQRAAPSRAHLNAINNRRRGENEKNDSEKKPKERISEKGNN---REYLKGE 241

Query: 325 SSRHHAMRKPKPD-SVPW-KRNRQNISSEDQALISSAIAGINKFSNDGSFLEK------- 375
           S  H  +R PK D S+ W KR  Q   +ED  LIS A A +NKFSNDG+F+++       
Sbjct: 242 SLNHRVLRAPKTDPSLSWGKRKSQTHRNEDSKLISEAAAHMNKFSNDGNFMKEMLSKQKN 301

Query: 376 --INNLESKTVNVLTAEVDELKSDKGSSKKAPSVSTQKLNANQLAAKILQLRMKGKHEEA 433
             ++ +E++  +    E + L S+     +    S + L+ N+LAAK LQLRMKGKHEEA
Sbjct: 302 VSVSPVETRGDHRSDVEQEALPSETNKDDEGTLPSMENLSVNKLAAKALQLRMKGKHEEA 361

Query: 434 EQLSREMEAVLENEDTAVEEPR--HEVRSSTRNTIKPSXXXXXXXXXXXXXHLANKIMHN 491
           +++  E E +   +    +  +  H +R++ R  +K               HLA  IM N
Sbjct: 362 QKIMEEAERLKAKQAVGDDSSKDHHSIRTAVRYPVK-DMSGRRKNEDDTDMHLAKSIMQN 420

Query: 492 KQYNMS-KSIEDEYDFGDAPSKKGKRRNKDAH--EERRSTHWLTTQKERCMYCFENPSRP 548
           KQY  S ++ +DEY++GDAPSKK ++R   ++  E+      + TQ+ERC++CFENP RP
Sbjct: 421 KQYKTSNQAADDEYEYGDAPSKKSRKRESSSNIPEKDNRVKRIMTQQERCLFCFENPKRP 480

Query: 549 KHLVVAIGNFTYLMLPQLEPVVPGHCIILPLQHESATRTVDRSVWEEIRNFKKCLLKMFA 608
           KHLVV+I NFTYLMLPQ +P+V GHC ILP+QHE+A+R+VD +VW+EIRNFKKCL+ M+A
Sbjct: 481 KHLVVSIANFTYLMLPQHQPLVQGHCCILPMQHEAASRSVDDNVWDEIRNFKKCLIMMYA 540

Query: 609 QQDKDIVFMETVISLAKQRRHCMIECIPIPSEVSNNAPMYFKKAIDEAEEEWTQHDMKKL 668
           ++ KD VF+ETVI L++QRRHC+IECIPIP E++   P+YFKKAIDEAE EW+QH+ KKL
Sbjct: 541 KEGKDAVFLETVIGLSQQRRHCLIECIPIPQEIAKEGPLYFKKAIDEAESEWSQHNAKKL 600

Query: 669 IPT--KGNLHQVIPENFAYFHVEFGLDRGFAHVIDDESKFSAGFGLNVIRGMLQLXXXXX 726
           I T  KG L   IP+NF YFHVEFGLD+GF HVIDDE +F++  GLNVIRGML+L     
Sbjct: 601 IDTSVKG-LRNSIPKNFPYFHVEFGLDKGFVHVIDDEQQFNSNLGLNVIRGMLELPEEDM 659

Query: 727 XXXXXXXXXXNQKQAVANFMKDWEPFDWTKQLD 759
                     +QK+AVA F ++WE FDWTKQLD
Sbjct: 660 YRRRRQESVESQKKAVATFAREWEHFDWTKQLD 692



>AT5G56900.2 | chr5:23019750-23022670 REVERSE LENGTH=597
          Length = 596

 Score = 77.4 bits (189), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 52/219 (23%), Positives = 98/219 (44%), Gaps = 15/219 (6%)

Query: 503 EYDFGDAPSKKGKRRNKDAHEERRSTHWLTTQKERCMYCFENPSRPKHLVVAIGNFTYLM 562
           +++F D  S + K R+++A+  +            C +C  +PS   HL+V++G   Y  
Sbjct: 359 KHEFQDESSIQRKPRSENANRSKE-----------CWFCLSSPSVESHLIVSVGESFYCA 407

Query: 563 LPQLEPVVPGHCIILPLQHESATRTVDRSVWEEIRNFKKCLLKMFAQQDKDIVFMETVIS 622
           LP+   +V  H +I+P++H   T  +   V  E+  ++  L   +  Q  D VF E V  
Sbjct: 408 LPK-GSLVEDHILIIPIEHLPNTLVLSPEVESELSRYQNGLRNCYKSQGNDAVFFELV-- 464

Query: 623 LAKQRRHCMIECIPIPSEVSNNAPMYFKKAIDEAEEEWTQHDMKKLIPTKGNLHQVIPEN 682
            +K+  H  ++ +P+PS  +   P  F  A ++   +            +  L +     
Sbjct: 465 -SKRVSHANLQVVPVPSSRARLLPNIFSLAAEKLGFKLVTKKFNDSTDGRKYLQKEYNAA 523

Query: 683 FAYFHVEFGLDRGFAHVIDDESKFSAGFGLNVIRGMLQL 721
              F+VE       +H +++   F A FG  V+ G+L++
Sbjct: 524 LGLFYVELPDGTVLSHTLEENEVFPAQFGREVLAGLLKI 562



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.313    0.129    0.374 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 12,887,879
Number of extensions: 510638
Number of successful extensions: 1312
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 1301
Number of HSP's successfully gapped: 2
Length of query: 759
Length of database: 11,106,569
Length adjustment: 106
Effective length of query: 653
Effective length of database: 8,200,473
Effective search space: 5354908869
Effective search space used: 5354908869
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 116 (49.3 bits)