BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0738100 Os03g0738100|Os03g0738100
(3476 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G50030.1 | chr1:18522626-18539619 REVERSE LENGTH=2482 249 1e-65
AT5G40820.1 | chr5:16343860-16353847 REVERSE LENGTH=2703 188 6e-47
AT3G48190.1 | chr3:17797628-17828361 FORWARD LENGTH=3846 175 5e-43
AT4G36080.1 | chr4:17059996-17077628 REVERSE LENGTH=3835 67 1e-10
AT2G17930.1 | chr2:7784455-7802230 REVERSE LENGTH=3859 65 7e-10
AT2G35075.1 | chr2:14786682-14788747 FORWARD LENGTH=424 59 5e-08
>AT1G50030.1 | chr1:18522626-18539619 REVERSE LENGTH=2482
Length = 2481
Score = 249 bits (637), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 171/605 (28%), Positives = 294/605 (48%), Gaps = 77/605 (12%)
Query: 1677 NYGV--ELKEIVESGLSTVPLLPWQEIIPQLFARLSFHPEKIVRKQLESILVKLGNLSPC 1734
N+G +++ +++G S V + W ++PQ+ AR+ + + VR+ ++S+L+++G P
Sbjct: 1817 NHGATADVQTALKTGFSHVNINTWLVVLPQIIARIHSN-NRAVRELIQSLLIRIGENHPQ 1875
Query: 1735 SIVYPTLVDINACEGEPSDELQRILDFLVKQYPKLVKDVKLAIEELGMVTVLWEEQWLST 1794
+++YP LV + Q ++D + + LV +L EL V +LW E W
Sbjct: 1876 ALMYPLLVACKSISNLRRAAAQEVVDKVRQHSGALVDQAQLVSHELIRVAILWHEMWHEA 1935
Query: 1795 LQDLHSDVLRRINILKEEAARVAANSTLSSAEKNKINAAKYSAIMTPIVVALERRLASTS 1854
L EEA+R L E N K ++ P+ L+
Sbjct: 1936 L---------------EEASR------LYFGEHNIEGMLK---VLEPLHDMLDE---GVK 1968
Query: 1855 REPKTSHEVWFHKEYNAQLKSA--ITALKTPPGSPSALGEIWRPFDSIAASLATHLRK-S 1911
++ T E F + Y +LK A G + L + W + + + L +
Sbjct: 1969 KDSTTIQERAFIEAYRHELKEAHECCCNYKITGKDAELTQAWDLYYHVFKRIDKQLASLT 2028
Query: 1912 CISLSEIAPQLAALSTSNIPMPGFEKQIFXXXXXXFADSHGTITISSFCKEVTVLSTKTR 1971
+ L ++P+L + +PG + AD+ +TISSF +++ V+++K R
Sbjct: 2029 TLDLESVSPELLLCRDLELAVPGTYR----------ADA-PVVTISSFSRQLVVITSKQR 2077
Query: 1972 PKKLVLQGSDGQKYTYLLKGREDLRLDSRIMQLLEAINSFFYSSSDTRSRNMAIRFYSVT 2031
P+KL + G+DG+ Y +LLKG EDLR D R+MQL +N+ +S T ++++I+ YSV
Sbjct: 2078 PRKLTIHGNDGEDYAFLLKGHEDLRQDERVMQLFGLVNTLLENSRKTAEKDLSIQRYSVI 2137
Query: 2032 PISGRAGLIQWVENVSSIYNVYKTWQKRSQLAQAQLSSVNTVNNSIHKSVPPVPRPSDMF 2091
P+S +GLI WV N +++++ + + ++ +N N + P
Sbjct: 2138 PLSPNSGLIGWVPNCDTLHHLIREHRDARKII------LNQENKHMLSFAPD-------- 2183
Query: 2092 YGKIIPALKEKGIKRVISRRDWPLDVKRKVLLELMKETPKQILWQEMWCASEGFRNFNSK 2151
Y + PL K +V ++ T L + +W S + +
Sbjct: 2184 YDNL------------------PLIAKVEVFEYALENTEGNDLSRVLWLKSRSSEVWLER 2225
Query: 2152 VKRFSSSVAAMSMIGHVLGLGDRHLDNILMDFSSGDVVHIDYNICFDKG-KRLKIPEIVP 2210
++ S+A MSM+G++LGLGDRH N+++ SG ++HID+ CF+ R K PE VP
Sbjct: 2226 RTNYTRSLAVMSMVGYILGLGDRHPSNLMLHRYSGKILHIDFGDCFEASMNREKFPEKVP 2285
Query: 2211 FRLTQTIESALGLTGVEGVFRVTCEEVMAVLLRNKDIILMLLEVFLWDPLMEWTRGNIQD 2270
FRLT+ + A+ ++G+EG FR TCE VM VL NKD ++ ++E F+ DPL+ W N +
Sbjct: 2286 FRLTRMLVKAMEVSGIEGNFRSTCENVMQVLRTNKDSVMAMMEAFVHDPLINWRLFNFNE 2345
Query: 2271 EAGIA 2275
+A
Sbjct: 2346 VPQLA 2350
>AT5G40820.1 | chr5:16343860-16353847 REVERSE LENGTH=2703
Length = 2702
Score = 188 bits (477), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 105/313 (33%), Positives = 165/313 (52%), Gaps = 34/313 (10%)
Query: 1955 TISSFCKEVTVLSTKTRPKKLVLQGSDGQKYTYLLKGREDLRLDSRIMQLLEAINSFFYS 2014
TIS E +LS+ RPKK++L G+DG +Y +L K ++DLR D+R+M+ IN
Sbjct: 2362 TISGIADEAEILSSLQRPKKIILLGNDGIEYPFLCKPKDDLRKDARMMEFTAMINRLLSK 2421
Query: 2015 SSDTRSRNMAIRFYSVTPISGRAGLIQWVENVSSIYNVYKTWQKRSQLAQAQLSSVNTVN 2074
++R R + IR ++V P++ GL++WV + + ++ + + N
Sbjct: 2422 YPESRRRKLYIRTFAVAPLTEDCGLVEWVPHTRGLRHILQ--DIYISCGKFDRQKTNPQI 2479
Query: 2075 NSIHKSVPPVPRPSDMFYGKIIPALKEKGIKRVISRRDWPLDVKRKVLLELMKETPKQIL 2134
I+ V + +M KI+P V K L E
Sbjct: 2480 KRIYDQCA-VKKEYEMLKTKILPMFPP---------------VFHKWFLTTFSEPAA--- 2520
Query: 2135 WQEMWCASEGFRNFNSKVKRFSSSVAAMSMIGHVLGLGDRHLDNILMDFSSGDVVHIDYN 2194
W F S+V ++ + A SM+GH++GLGDRH +NIL D +SGD VH+D++
Sbjct: 2521 ----W--------FRSRVA-YAHTTAVWSMVGHIVGLGDRHGENILFDSTSGDCVHVDFS 2567
Query: 2195 ICFDKGKRLKIPEIVPFRLTQTIESALGLTGVEGVFRVTCEEVMAVLLRNKDIILMLLEV 2254
FDKG +L+ PE+VPFRLTQ + LG+TG EG+F CE + VL +++ ++ +LE
Sbjct: 2568 CLFDKGLQLEKPELVPFRLTQNMIDGLGITGYEGIFMRVCEITLTVLRTHRETLMSILET 2627
Query: 2255 FLWDPLMEWTRGN 2267
F+ DPL+EWT+ +
Sbjct: 2628 FIHDPLVEWTKSH 2640
>AT3G48190.1 | chr3:17797628-17828361 FORWARD LENGTH=3846
Length = 3845
Score = 175 bits (443), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 108/307 (35%), Positives = 166/307 (54%), Gaps = 44/307 (14%)
Query: 1963 VTVLSTKTRPKKLVLQGSDGQKYTYLLK-GREDLRLDSRIMQLLEAINSFFYSSSDTRSR 2021
VTV++ PK + GSDGQKY L K G +DLR D+ + Q +N+F +++ DT R
Sbjct: 3492 VTVMNGINAPKVVECFGSDGQKYKQLAKSGNDDLRQDAVMEQFFGLVNTFLHNNRDTWKR 3551
Query: 2022 NMAIRFYSVTPISGRAGLIQWVENVSSIYNVYKTWQKRSQLAQAQLSSVNTVNNSIHKSV 2081
+A+R Y V P + AG+++WV+ + + Y RS+ A + N
Sbjct: 3552 RLAVRTYKVIPFTPSAGVLEWVDGTIPLGD-YLIGSSRSEGAHGRYGIGNWK-------- 3602
Query: 2082 PPVPRPSDMFYGKIIPALKEKGIKRVISRRDWPLDVKRKVLLEL---MKETPKQILWQEM 2138
P +E + S +D KRK +++ + ++
Sbjct: 3603 --------------YPKCRE----HMSSAKD-----KRKAFVDVCTNFRPVMHYFFLEKF 3639
Query: 2139 WCASEGFRNFNSKVKR--FSSSVAAMSMIGHVLGLGDRHLDNILMDFSSGDVVHIDYNIC 2196
++ F VKR ++ SVAA SM+G+++GLGDRH NIL+D ++ +VVHID +
Sbjct: 3640 LQPADWF------VKRLAYTRSVAASSMVGYIVGLGDRHAMNILIDQATAEVVHIDLGVA 3693
Query: 2197 FDKGKRLKIPEIVPFRLTQTIESALGLTGVEGVFRVTCEEVMAVLLRNKDIILMLLEVFL 2256
F++G LK PE VPFRLT+ I +G+TGVEGVFR CEE ++V+ NK+ +L ++EVF+
Sbjct: 3694 FEQGLMLKTPERVPFRLTRDIIDGMGITGVEGVFRRCCEETLSVMRTNKEALLTIVEVFI 3753
Query: 2257 WDPLMEW 2263
DPL +W
Sbjct: 3754 HDPLYKW 3760
>AT4G36080.1 | chr4:17059996-17077628 REVERSE LENGTH=3835
Length = 3834
Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 131/299 (43%), Gaps = 37/299 (12%)
Query: 1973 KKLVLQGSDGQKYTYLLKGR--EDLRLDSRIMQLLEAINSFFYSSSDTRSRNMAIRFYSV 2030
++L L GSDG + ++++ + R D RI+QL +N F ++R R++ + +
Sbjct: 3476 RRLTLIGSDGSQKHFIVQTSLTPNARSDERILQLFRVMNQMFDKHKESRRRHLGLHTPII 3535
Query: 2031 TPISGRAGLIQWVENVSSIYNVYKTWQKRSQLAQAQLSSVNTVNNSIHKSVPPVPRPSDM 2090
P+ + +++ ++ VY+ R+ R SD+
Sbjct: 3536 IPVWSQVRMVEDDLMYNTFLEVYENHCGRNG------------------------RESDL 3571
Query: 2091 FYGKIIPALKEKGIKRVISRRDWPL---DVKRKVLLELMKETPKQILW-QEMWCASEGFR 2146
I KEK + + I+ + P D++ + E+ K ++ Q M+ S
Sbjct: 3572 ----PITYFKEK-LNQAITGQISPEAIGDLRLQAYGEITKNIVNDTIFSQYMYKTSMSGS 3626
Query: 2147 NFNSKVKRFSSSVAAMSMIGHVLGLGDRHLDNILMDFSSGDVVHIDYNICFDKGKRLKIP 2206
+ + K+F+ +A + + +L +G R + IL +SG + D++ +D +++
Sbjct: 3627 HLWAFKKQFAVQLAVSNFMSFILQIGGRSPNKILFAKNSGKMFQTDFHPSYDSNGMIELN 3686
Query: 2207 EIVPFRLTQTIESALGLTGVEG-VFRVTCEEVMAVL-LRNKDIILMLLEVFLWDPLMEW 2263
E VPFRLT+ + + L GVEG + C AV + + + L +F D L+ W
Sbjct: 3687 EPVPFRLTRNMHAFLSHFGVEGPLMSNMCSASQAVFSSKQNEHLRYQLAMFFRDELLSW 3745
>AT2G17930.1 | chr2:7784455-7802230 REVERSE LENGTH=3859
Length = 3858
Score = 65.1 bits (157), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/296 (20%), Positives = 128/296 (43%), Gaps = 31/296 (10%)
Query: 1973 KKLVLQGSDGQKYTYLLKGR--EDLRLDSRIMQLLEAINSFFYSSSDTRSRNMAIRFYSV 2030
++L L GSDG + ++++ + R D RI+QL +N F ++R R++ I +
Sbjct: 3500 RRLTLIGSDGSQKHFIVQTSLTPNARSDERILQLFRVMNQMFDKHKESRRRHIGIHTPII 3559
Query: 2031 TPISGRAGLIQWVENVSSIYNVYKTWQKRSQLAQAQLSSVNTVNNSIHKSVPPVPRPSDM 2090
P+ + +++ ++ VY+ R+ +A L P
Sbjct: 3560 IPVWSQVRMVEDDLMYNTFLEVYENHCARND-READL-------------------PITH 3599
Query: 2091 FYGKIIPALKEKGIKRVISRRDWPLDVKRKVLLELMKE-TPKQILWQEMWCASEGFRNFN 2149
F ++ A+ + I D++ + +++ K I Q M+ +
Sbjct: 3600 FKEQLNQAISGQISAEAIG------DLRLQAYIDITKTLVNDSIFSQYMYKTLMSGSHMW 3653
Query: 2150 SKVKRFSSSVAAMSMIGHVLGLGDRHLDNILMDFSSGDVVHIDYNICFDKGKRLKIPEIV 2209
+ K+F+ +A S + +L +G R + +L ++G + D++ +D ++ E V
Sbjct: 3654 AFKKQFAVQLAVSSFMSFMLQIGGRSPNKVLFAKNTGKMFQTDFHPAYDANGMIEFNEPV 3713
Query: 2210 PFRLTQTIESALGLTGVEGVFRVT-CEEVMAVL-LRNKDIILMLLEVFLWDPLMEW 2263
PFRLT+ +++ GVEG+ + C AV+ + + + L +F D L+ W
Sbjct: 3714 PFRLTRNMQAFFSQFGVEGLLMSSMCSAAQAVISSKQNEHLRYQLAMFFRDELLSW 3769
>AT2G35075.1 | chr2:14786682-14788747 FORWARD LENGTH=424
Length = 423
Score = 58.9 bits (141), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 53/91 (58%), Gaps = 11/91 (12%)
Query: 1892 EIWRPFDSIAASLATHLRKSCISLSEIAPQLAALSTSNIPMPGFEKQIFXXXXXXFADSH 1951
++WR DSIA SLA+ +KS +SL E++P L+ LS+ NIPMPG + A +
Sbjct: 252 DVWRLLDSIAVSLASQQKKSSVSLKEVSPSLSWLSSCNIPMPGLAIE---------ASRY 302
Query: 1952 GTITISSFCKEVTVLS--TKTRPKKLVLQGS 1980
G +++ + E+ +LS T+T L L G+
Sbjct: 303 GILSVHNKVPEIVLLSWLTQTMEAALWLTGN 333
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.318 0.132 0.384
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 66,375,603
Number of extensions: 2612571
Number of successful extensions: 7059
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 7056
Number of HSP's successfully gapped: 9
Length of query: 3476
Length of database: 11,106,569
Length adjustment: 118
Effective length of query: 3358
Effective length of database: 7,871,481
Effective search space: 26432433198
Effective search space used: 26432433198
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 122 (51.6 bits)