BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0734900 Os03g0734900|Os03g0734900
(271 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G51600.1 | chr1:19133176-19135252 FORWARD LENGTH=303 177 4e-45
AT3G21175.1 | chr3:7422832-7424598 FORWARD LENGTH=298 173 1e-43
AT4G24470.3 | chr4:12645785-12647734 FORWARD LENGTH=318 160 9e-40
AT5G60100.2 | chr5:24198215-24200502 REVERSE LENGTH=523 58 5e-09
AT2G46790.1 | chr2:19232874-19234901 FORWARD LENGTH=469 58 5e-09
AT2G46670.1 | chr2:19164589-19165233 REVERSE LENGTH=184 57 1e-08
AT5G61380.1 | chr5:24675540-24678176 FORWARD LENGTH=619 56 2e-08
AT5G02810.1 | chr5:638283-641461 REVERSE LENGTH=728 55 3e-08
AT5G14370.1 | chr5:4632147-4633651 REVERSE LENGTH=340 54 8e-08
AT5G24930.1 | chr5:8589325-8590949 FORWARD LENGTH=407 53 1e-07
AT5G24470.1 | chr5:8356204-8358873 REVERSE LENGTH=668 52 4e-07
AT2G24790.1 | chr2:10566959-10567946 FORWARD LENGTH=295 51 6e-07
AT1G07050.1 | chr1:2164327-2165133 REVERSE LENGTH=196 51 7e-07
AT1G49130.1 | chr1:18174741-18175936 REVERSE LENGTH=327 51 8e-07
AT1G68520.1 | chr1:25709331-25710749 REVERSE LENGTH=407 50 1e-06
AT5G48250.1 | chr5:19561719-19563113 REVERSE LENGTH=374 49 3e-06
AT5G57180.2 | chr5:23168393-23170763 FORWARD LENGTH=436 49 3e-06
AT5G57660.1 | chr5:23355573-23356729 FORWARD LENGTH=356 49 3e-06
AT1G04500.1 | chr1:1221757-1224235 REVERSE LENGTH=387 49 4e-06
AT5G15850.1 | chr5:5176297-5177473 REVERSE LENGTH=356 49 4e-06
AT1G25440.1 | chr1:8933939-8935284 REVERSE LENGTH=418 48 5e-06
>AT1G51600.1 | chr1:19133176-19135252 FORWARD LENGTH=303
Length = 302
Score = 177 bits (450), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 106/216 (49%), Positives = 137/216 (63%), Gaps = 27/216 (12%)
Query: 39 QLTLVYQGEVYVFDPVPPQKVQAVLLVLGGSDMP----PGLVS-------MAVPTTFDEK 87
QLTL +QG+VYVFD V P+KVQAVLL+LGG ++P PGL S ++P T
Sbjct: 83 QLTLSFQGQVYVFDSVLPEKVQAVLLLLGGRELPQAAPPGLGSPHQNNRVSSLPGTPQRF 142
Query: 88 STTVAARRVASLMRFREKRKERCFDKKIRYSVRKEVAQKMKRRKGQF-AGRADFGDGSCS 146
S +R+ASL+RFREKRK R FDKKIRY+VRKEVA +M+R KGQF + +++ + + +
Sbjct: 143 SI---PQRLASLVRFREKRKGRNFDKKIRYTVRKEVALRMQRNKGQFTSAKSNNDEAASA 199
Query: 147 SAPCGST-----ANGEDDHIRETHCQNCGISSRLTPAMRRGPAGPRSLCNACGLMWANKG 201
+ GS + E H +E C++CGI + TP MRRGPAGPR+LCNACGLMWANKG
Sbjct: 200 GSSWGSNQTWAIESSEAQH-QEISCRHCGIGEKSTPMMRRGPAGPRTLCNACGLMWANKG 258
Query: 202 TLRSPLNAPKMTVQHPADLSKTGDTDDSKANLCAEH 237
R A T Q+ L+K D ANL +H
Sbjct: 259 AFRDLSKASPQTAQN-LPLNKNED-----ANLETDH 288
>AT3G21175.1 | chr3:7422832-7424598 FORWARD LENGTH=298
Length = 297
Score = 173 bits (438), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 103/216 (47%), Positives = 131/216 (60%), Gaps = 28/216 (12%)
Query: 39 QLTLVYQGEVYVFDPVPPQKVQAVLLVLGGSDMPPGLVSMAVPTTFD--EKSTTVAA--- 93
QLTL +QG+VYVFD V P+KVQAVLL+LGG ++P +PTT ++ V
Sbjct: 79 QLTLSFQGQVYVFDRVSPEKVQAVLLLLGGREVP-----HTLPTTLGSPHQNNRVLGLSG 133
Query: 94 --------RRVASLMRFREKRKERCFDKKIRYSVRKEVAQKMKRRKGQF-AGRADFGDGS 144
+R+ASL+RFREKRK R FDK IRY+VRKEVA +M+R+KGQF + ++ D
Sbjct: 134 TPQRLSVPQRLASLLRFREKRKGRNFDKTIRYTVRKEVALRMQRKKGQFTSAKSSNDDSG 193
Query: 145 CSSAPCGST----ANGEDDHIRETHCQNCGISSRLTPAMRRGPAGPRSLCNACGLMWANK 200
+ + GS G + E C++CG S + TP MRRGP GPR+LCNACGLMWANK
Sbjct: 194 STGSDWGSNQSWAVEGTETQKPEVLCRHCGTSEKSTPMMRRGPDGPRTLCNACGLMWANK 253
Query: 201 GTLRSPLNAPKMTVQHPADLSKTGDTDDSKANLCAE 236
GTLR P Q P LS + D ANL A+
Sbjct: 254 GTLRDLSKVPP--PQTPQHLSLNKNED---ANLEAD 284
>AT4G24470.3 | chr4:12645785-12647734 FORWARD LENGTH=318
Length = 317
Score = 160 bits (404), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 86/173 (49%), Positives = 112/173 (64%), Gaps = 10/173 (5%)
Query: 39 QLTLVYQGEVYVFDPVPPQKVQAVLLVLGGS-DMPPGLVSMAVPT------TFDEKSTTV 91
QLT+ ++G+VYVFD V KV AVL +LGGS ++ PG M + + +S
Sbjct: 83 QLTISFRGQVYVFDAVGADKVDAVLSLLGGSTELAPGPQVMELAQQQNHMPVVEYQSRCS 142
Query: 92 AARRVASLMRFREKRKERCFDKKIRYSVRKEVAQKMKRRKGQFAGRADFGDGSCSSAPCG 151
+R SL RFR+KR RCF+KK+RY VR+EVA +M R KGQF + DG+ +S
Sbjct: 143 LPQRAQSLDRFRKKRNARCFEKKVRYGVRQEVALRMARNKGQFTS-SKMTDGAYNSGTDQ 201
Query: 152 STANGEDDHIRETHCQNCGISSRLTPAMRRGPAGPRSLCNACGLMWANKGTLR 204
+A +DD E C +CGISS+ TP MRRGP+GPR+LCNACGL WAN+GTLR
Sbjct: 202 DSA--QDDAHPEISCTHCGISSKCTPMMRRGPSGPRTLCNACGLFWANRGTLR 252
>AT5G60100.2 | chr5:24198215-24200502 REVERSE LENGTH=523
Length = 522
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 36/47 (76%)
Query: 93 ARRVASLMRFREKRKERCFDKKIRYSVRKEVAQKMKRRKGQFAGRAD 139
A+R A+LM+FR KRKERCF+KK+RY RK++A++ KGQF + D
Sbjct: 467 AQREAALMKFRLKRKERCFEKKVRYHSRKKLAEQRPHVKGQFIRKRD 513
>AT2G46790.1 | chr2:19232874-19234901 FORWARD LENGTH=469
Length = 468
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 25/43 (58%), Positives = 35/43 (81%)
Query: 93 ARRVASLMRFREKRKERCFDKKIRYSVRKEVAQKMKRRKGQFA 135
++R A+LM+FR KRK+RCFDKK+RY RK++A++ R KGQF
Sbjct: 415 SQREAALMKFRLKRKDRCFDKKVRYQSRKKLAEQRPRVKGQFV 457
>AT2G46670.1 | chr2:19164589-19165233 REVERSE LENGTH=184
Length = 183
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/42 (59%), Positives = 35/42 (83%)
Query: 93 ARRVASLMRFREKRKERCFDKKIRYSVRKEVAQKMKRRKGQF 134
++R A+LM+FR KRK+RCFDKK+RY RK++A++ R KGQF
Sbjct: 130 SQREAALMKFRLKRKDRCFDKKVRYQSRKKLAEQRPRVKGQF 171
>AT5G61380.1 | chr5:24675540-24678176 FORWARD LENGTH=619
Length = 618
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 24/42 (57%), Positives = 31/42 (73%)
Query: 94 RRVASLMRFREKRKERCFDKKIRYSVRKEVAQKMKRRKGQFA 135
RR +L++FR KR +RCFDKKIRY RK +A++ R KGQF
Sbjct: 532 RREEALLKFRRKRNQRCFDKKIRYVNRKRLAERRPRVKGQFV 573
>AT5G02810.1 | chr5:638283-641461 REVERSE LENGTH=728
Length = 727
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 34/43 (79%)
Query: 93 ARRVASLMRFREKRKERCFDKKIRYSVRKEVAQKMKRRKGQFA 135
++R A+L +FR+KRKERCF KK+RY RK++A++ R +GQF
Sbjct: 667 SQREAALTKFRQKRKERCFRKKVRYQSRKKLAEQRPRVRGQFV 709
>AT5G14370.1 | chr5:4632147-4633651 REVERSE LENGTH=340
Length = 339
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 52/99 (52%), Gaps = 9/99 (9%)
Query: 45 QGEVYVFDPVPPQKVQAVLLVLGG-SDMPPGLVSMAVPTTFDEKSTT---VAARRVASLM 100
+G +YV D PPQ V + G +D AVP E TT R ASL+
Sbjct: 245 KGTLYV-DGEPPQTVPDLHASADGFNDGGEAGNLWAVP----EMETTERLWRGHREASLL 299
Query: 101 RFREKRKERCFDKKIRYSVRKEVAQKMKRRKGQFAGRAD 139
R++EKR+ R F K+IRY VRK A+K R KG+F R D
Sbjct: 300 RYKEKRQNRLFSKRIRYQVRKLNAEKRPRVKGRFVKRED 338
>AT5G24930.1 | chr5:8589325-8590949 FORWARD LENGTH=407
Length = 406
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 33/48 (68%)
Query: 92 AARRVASLMRFREKRKERCFDKKIRYSVRKEVAQKMKRRKGQFAGRAD 139
+A R A +MR+REKRK R F+K IRY+ RK A+ R KG+FA R D
Sbjct: 336 SAEREARVMRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRTD 383
>AT5G24470.1 | chr5:8356204-8358873 REVERSE LENGTH=668
Length = 667
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 33/42 (78%)
Query: 94 RRVASLMRFREKRKERCFDKKIRYSVRKEVAQKMKRRKGQFA 135
+R A+L +FR KRK+RC++KK+RY RK++A++ R KGQF
Sbjct: 617 QREAALTKFRMKRKDRCYEKKVRYESRKKLAEQRPRIKGQFV 658
>AT2G24790.1 | chr2:10566959-10567946 FORWARD LENGTH=295
Length = 294
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 32/47 (68%)
Query: 93 ARRVASLMRFREKRKERCFDKKIRYSVRKEVAQKMKRRKGQFAGRAD 139
A R A ++R+REKRK R F+K IRY+ RK A+ R KG+FA R D
Sbjct: 227 AEREARVLRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRTD 273
>AT1G07050.1 | chr1:2164327-2165133 REVERSE LENGTH=196
Length = 195
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 31/44 (70%)
Query: 94 RRVASLMRFREKRKERCFDKKIRYSVRKEVAQKMKRRKGQFAGR 137
RR AS++R++EKR+ R F KKIRY VRK A K R KG+F R
Sbjct: 150 RREASVLRYKEKRQSRLFSKKIRYQVRKLNADKRPRFKGRFVKR 193
>AT1G49130.1 | chr1:18174741-18175936 REVERSE LENGTH=327
Length = 326
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 37/59 (62%), Gaps = 2/59 (3%)
Query: 80 VPTTFDEKSTTVAARRVASLMRFREKRKERCFDKKIRYSVRKEVAQKMKRRKGQFAGRA 138
VP +EK V + R A + R+R+KRK R F+KKIRY VRK A K R KG+F R+
Sbjct: 265 VPPGIEEKR--VRSEREARVWRYRDKRKNRLFEKKIRYEVRKVNADKRPRMKGRFVRRS 321
>AT1G68520.1 | chr1:25709331-25710749 REVERSE LENGTH=407
Length = 406
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 31/47 (65%)
Query: 95 RVASLMRFREKRKERCFDKKIRYSVRKEVAQKMKRRKGQFAGRADFG 141
R A + R+REKR+ R F KKIRY VRK A+K R KG+F R+ G
Sbjct: 357 REARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRSSIG 403
>AT5G48250.1 | chr5:19561719-19563113 REVERSE LENGTH=374
Length = 373
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 36/54 (66%)
Query: 81 PTTFDEKSTTVAARRVASLMRFREKRKERCFDKKIRYSVRKEVAQKMKRRKGQF 134
PT D +++ A R ++MR++EK+K R FDK++RY RKE A +R KG+F
Sbjct: 302 PTAQDIIASSHATTRNNAVMRYKEKKKARKFDKRVRYVSRKERADVRRRVKGRF 355
>AT5G57180.2 | chr5:23168393-23170763 FORWARD LENGTH=436
Length = 435
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 30/43 (69%)
Query: 95 RVASLMRFREKRKERCFDKKIRYSVRKEVAQKMKRRKGQFAGR 137
R AS++R++EKR+ R F KKIRY VRK A + R KG+F R
Sbjct: 383 REASVLRYKEKRRTRLFSKKIRYQVRKLNADQRPRMKGRFVRR 425
>AT5G57660.1 | chr5:23355573-23356729 FORWARD LENGTH=356
Length = 355
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 31/45 (68%)
Query: 95 RVASLMRFREKRKERCFDKKIRYSVRKEVAQKMKRRKGQFAGRAD 139
R A ++R+REKRK R F+K IRY+ RK A+ R KG+FA R +
Sbjct: 285 REARVLRYREKRKNRKFEKTIRYASRKAYAESRPRIKGRFAKRTE 329
>AT1G04500.1 | chr1:1221757-1224235 REVERSE LENGTH=387
Length = 386
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 3/68 (4%)
Query: 83 TFDEKSTTVAARRVASLMRFREKRKERCFDKKIRYSVRKEVAQKMKRRKGQFAGRADFGD 142
+F++ A +R + R+ +KR ER F KKI+Y+ RK +A R +G+FA +FG+
Sbjct: 276 SFNKVGKLSAEQRKEKIHRYMKKRNERNFSKKIKYACRKTLADSRPRVRGRFAKNDEFGE 335
Query: 143 ---GSCSS 147
+CSS
Sbjct: 336 PNRQACSS 343
>AT5G15850.1 | chr5:5176297-5177473 REVERSE LENGTH=356
Length = 355
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 32/45 (71%)
Query: 95 RVASLMRFREKRKERCFDKKIRYSVRKEVAQKMKRRKGQFAGRAD 139
R A ++R+REK+K R F+K IRY+ RK A+K R KG+FA + D
Sbjct: 286 REARVLRYREKKKMRKFEKTIRYASRKAYAEKRPRIKGRFAKKKD 330
>AT1G25440.1 | chr1:8933939-8935284 REVERSE LENGTH=418
Length = 417
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/43 (55%), Positives = 29/43 (67%)
Query: 95 RVASLMRFREKRKERCFDKKIRYSVRKEVAQKMKRRKGQFAGR 137
R A + R+REKR+ R F KKIRY VRK A+K R KG+F R
Sbjct: 361 REARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKR 403
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.315 0.129 0.383
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 5,432,652
Number of extensions: 227501
Number of successful extensions: 766
Number of sequences better than 1.0e-05: 23
Number of HSP's gapped: 761
Number of HSP's successfully gapped: 23
Length of query: 271
Length of database: 11,106,569
Length adjustment: 97
Effective length of query: 174
Effective length of database: 8,447,217
Effective search space: 1469815758
Effective search space used: 1469815758
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 111 (47.4 bits)