BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os03g0724700 Os03g0724700|AK064412
         (215 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G66550.1  | chr5:26559752-26561162 REVERSE LENGTH=208          194   4e-50
AT5G42770.2  | chr5:17152147-17154355 FORWARD LENGTH=234          181   2e-46
AT2G25500.1  | chr2:10854652-10854948 REVERSE LENGTH=99            80   8e-16

>AT5G66550.1 | chr5:26559752-26561162 REVERSE LENGTH=208
          Length = 207

 Score =  194 bits (492), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 96/197 (48%), Positives = 124/197 (62%)

Query: 16  FKVVLGSSSPARREILADMGYEFTVMCADIDERAIRRXXXXXXXXXXXXXXXXXXXXXXH 75
           FK++LGS S AR+ ILA+MGY++T++ ADIDE+AIR                        
Sbjct: 10  FKLILGSQSMARKRILAEMGYDYTIVTADIDEKAIRTEKPEDLVVALAEAKANEIISKLG 69

Query: 76  GEDSAQERDQPTILITSDQVMVSKGMIRERPKGQEEAREFIKGYSGDKAFAVNYVLVTNL 135
           GE    +  QPT+LIT+D V+V KG+IRE+P  +EEAREFIKGYSG     V  VLV NL
Sbjct: 70  GESQFAKDPQPTLLITADTVVVYKGVIREKPTTKEEAREFIKGYSGSHGGVVGSVLVRNL 129

Query: 136 SNGASKGGWDIPEIYFHHIPEDFIQSVVKEGHMTCVAGGLKLTHPSVLPFIKQLIGTMDS 195
             G  KGGWD  E+YFH IPE  I  ++ +     VAGGL L HP + PFI  ++G +D+
Sbjct: 130 KTGVKKGGWDKAEVYFHEIPEQVIDGLIDDAITYKVAGGLTLEHPLISPFIDSVVGGVDT 189

Query: 196 VRGLPRELTERLIQEVL 212
           V GLP+ELTE+ I +VL
Sbjct: 190 VMGLPKELTEKFINDVL 206



>AT5G42770.2 | chr5:17152147-17154355 FORWARD LENGTH=234
          Length = 233

 Score =  181 bits (459), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 98/225 (43%), Positives = 132/225 (58%), Gaps = 26/225 (11%)

Query: 16  FKVVLGSSSPARREILADMGYEFTVMCADIDERAIRRXX---XXXXXXXXXXXXXXXXXX 72
           FK++LGSSS ARR+IL DMGY+FT+M ADIDE++IR+                       
Sbjct: 8   FKLILGSSSIARRKILTDMGYQFTLMSADIDEKSIRKEKPEELVLALAEAKADAIVSKLQ 67

Query: 73  XXHGEDSAQ-----------------------ERDQPTILITSDQVMVSKGMIRERPKGQ 109
               ED  Q                       E D+ T+LIT DQV+V +  +RE+P   
Sbjct: 68  ISECEDEEQPRVLIASDTAEAIMQRIPDGENIEEDKSTLLITCDQVVVYEDAVREKPSSV 127

Query: 110 EEAREFIKGYSGDKAFAVNYVLVTNLSNGASKGGWDIPEIYFHHIPEDFIQSVVKEGHMT 169
           EEARE+I+GYS      V+ V VTNL  G  KGG D  EIYF+ IPE+ I+ +++EG + 
Sbjct: 128 EEAREYIRGYSKGHTATVSSVAVTNLKTGVRKGGVDRVEIYFNEIPEETIEKLIEEGMVL 187

Query: 170 CVAGGLKLTHPSVLPFIKQLIGTMDSVRGLPRELTERLIQEVLGA 214
            VAG L + HP +LP +K+++GT DSV GLP+ELTE+LI+EVL +
Sbjct: 188 KVAGALLIEHPLILPCVKEVVGTTDSVMGLPKELTEKLIKEVLAS 232



>AT2G25500.1 | chr2:10854652-10854948 REVERSE LENGTH=99
          Length = 98

 Score = 80.1 bits (196), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 39/89 (43%), Positives = 56/89 (62%)

Query: 16  FKVVLGSSSPARREILADMGYEFTVMCADIDERAIRRXXXXXXXXXXXXXXXXXXXXXXH 75
           +K++LGS S AR++ILA+MGY+FT++ ADIDE+AIR+                       
Sbjct: 10  YKLILGSQSMARKQILAEMGYDFTIVTADIDEKAIRKEKPEDLVVTIAEAKANEIILKLG 69

Query: 76  GEDSAQERDQPTILITSDQVMVSKGMIRE 104
           GE+   +  QPT+LIT+D V+V KG+IRE
Sbjct: 70  GENQFTQDSQPTLLITADTVVVYKGVIRE 98



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.319    0.137    0.398 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 3,772,280
Number of extensions: 139383
Number of successful extensions: 292
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 290
Number of HSP's successfully gapped: 3
Length of query: 215
Length of database: 11,106,569
Length adjustment: 94
Effective length of query: 121
Effective length of database: 8,529,465
Effective search space: 1032065265
Effective search space used: 1032065265
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 109 (46.6 bits)