BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os03g0719300 Os03g0719300|AK119254
         (594 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G48430.1  | chr1:17902874-17906689 REVERSE LENGTH=594          798   0.0  
AT3G17770.1  | chr3:6081973-6085957 REVERSE LENGTH=596            786   0.0  

>AT1G48430.1 | chr1:17902874-17906689 REVERSE LENGTH=594
          Length = 593

 Score =  798 bits (2061), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 385/567 (67%), Positives = 457/567 (80%), Gaps = 3/567 (0%)

Query: 6   KKLINDPNDVVTEFIEGLVETYPGLQYLDGFPQIKVVLRADVVQGAYDKVAVISGGGSGH 65
           KK IN+PNDVVTEFIEGLVETYPGLQYLDG P+IKVVLRADV    YDKVAVISGGGSGH
Sbjct: 6   KKFINNPNDVVTEFIEGLVETYPGLQYLDGLPEIKVVLRADVSAANYDKVAVISGGGSGH 65

Query: 66  EPTHAGFVGPGMLTAAVSGDVFTSPPVDSILAAIRAVTGPMGCLLIVKNYTGDRLNFGLA 125
           EP  AG+VG GMLTAA+ GDVF SP VDSILA IRAVTGP GCLL+V NYTGDRLNFGLA
Sbjct: 66  EPAQAGYVGEGMLTAAICGDVFASPTVDSILARIRAVTGPKGCLLVVTNYTGDRLNFGLA 125

Query: 126 AEQAKSEGYKMEMVIVGDDCALPPPRGIAGRRGLAGTILVHKXXXXXXXXXXXXXXXXXE 185
           AEQAK+EG+ +E VIVGDDCALPPPRG+AGRRGLAGT+LVHK                 E
Sbjct: 126 AEQAKTEGFDIETVIVGDDCALPPPRGVAGRRGLAGTVLVHKVAGAAAAAGLSLAEVAAE 185

Query: 186 AKHASEVVGTMGVALSVCTLPGQVTSDRLGPKQMELGLGIHGEPGVAVVELQPIDVVVEH 245
           AKHASE+VGTMGVALSVC LPGQVTSDRLGP++MELGLG+HGEPG AVV++QP++VVV H
Sbjct: 186 AKHASEMVGTMGVALSVCALPGQVTSDRLGPEKMELGLGVHGEPGAAVVDIQPVEVVVSH 245

Query: 246 VLKQILSQETQYLPITRGSNVVLLINGLGATPIMELMIAARKAVPELQLEYGIAVDRVYT 305
           VL+QILS ET Y+PITRG++VVL+INGLG TP+MELMIAA KAVP+LQLEYG+AVDRVYT
Sbjct: 246 VLQQILSPETNYVPITRGNSVVLMINGLGGTPLMELMIAAGKAVPKLQLEYGLAVDRVYT 305

Query: 306 GTLMTSLDMAGFSITIMRSDENILQRLDAPTKAPAWPVGSEGNRPPAKIXXXXXXXXXGK 365
           G+ MTSLDMAGFSI+IM++D++IL+RLDAPT AP+WPVG++G+RPPAKI          K
Sbjct: 306 GSFMTSLDMAGFSISIMKADQSILERLDAPTNAPSWPVGTDGSRPPAKIPVPLPFRST-K 364

Query: 366 DDEILTEPQELSKQGCXXXXXXXXXXXXXXXXKDNLNEWDSKVGDGDCGTTMYRGATTIL 425
           ++E    PQELS+QG                 KD+LNEWD KVGDGDCG+TM RGAT IL
Sbjct: 365 NEESRYRPQELSQQGRILEAAIEAAATVVINLKDSLNEWDGKVGDGDCGSTMCRGATAIL 424

Query: 426 EDLKKRYPMNDAAGTINEIGSTVRRVMGGTSGILYDILCKAAYASLKQN--TSIGANEWA 483
           ED+KK YP+NDAA T++EIGS++RRVMGGTSGI+Y++LCKAAYA LK N  +   +  W+
Sbjct: 425 EDMKKYYPLNDAAETVSEIGSSIRRVMGGTSGIIYNLLCKAAYAELKANSQSETTSKHWS 484

Query: 484 DALEASVAAVSKYGGASAGYRTMLDALIPACTVLKQSLKAGDDPVTAFIXXXXXXXXXXX 543
           +AL++S++AVSKYGGA+AGYRTMLDALIPA  VL++ L  G+DP+ AF+           
Sbjct: 485 EALKSSISAVSKYGGATAGYRTMLDALIPASKVLEEKLSVGEDPIAAFVLSAEAATAGAE 544

Query: 544 XTKQMQAKAGRSSYIAPDLVASVPDPG 570
            T  M+A+AGRSSY++ ++ AS+PDPG
Sbjct: 545 STIHMKAQAGRSSYVSAEIFASIPDPG 571



>AT3G17770.1 | chr3:6081973-6085957 REVERSE LENGTH=596
          Length = 595

 Score =  786 bits (2029), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 393/572 (68%), Positives = 455/572 (79%), Gaps = 2/572 (0%)

Query: 1   MALQGKKLINDPNDVVTEFIEGLVETYPGLQYLDGFPQIKVVLRADVVQGAYDKVAVISG 60
           M    KK IN+PNDVVTEFIEGLVETYPGLQYLDGFP++KVVLRADV    YDKVAVISG
Sbjct: 1   MDFAAKKFINNPNDVVTEFIEGLVETYPGLQYLDGFPEVKVVLRADVSAAKYDKVAVISG 60

Query: 61  GGSGHEPTHAGFVGPGMLTAAVSGDVFTSPPVDSILAAIRAVTGPMGCLLIVKNYTGDRL 120
           GGSGHEP HAG+VG GMLTAA+ GDVF SPPVDSILA IRAVTG  GCLLIVKNYTGDRL
Sbjct: 61  GGSGHEPAHAGYVGEGMLTAAICGDVFASPPVDSILAGIRAVTGTEGCLLIVKNYTGDRL 120

Query: 121 NFGLAAEQAKSEGYKMEMVIVGDDCALPPPRGIAGRRGLAGTILVHKXXXXXXXXXXXXX 180
           NFGLAAEQAKSEGYK+E VIVG+DCALPPPRGIAGRRGLAGT+LVHK             
Sbjct: 121 NFGLAAEQAKSEGYKVETVIVGEDCALPPPRGIAGRRGLAGTVLVHKVAGAAAAAGLSLE 180

Query: 181 XXXXEAKHASEVVGTMGVALSVCTLPGQVTSDRLGPKQMELGLGIHGEPGVAVVELQPID 240
               EAK ASE+VGTMGVALSVCTLPGQVTSDRLG ++MELGLGIHGEPG AVV+++P+D
Sbjct: 181 KVAAEAKCASEMVGTMGVALSVCTLPGQVTSDRLGAQKMELGLGIHGEPGAAVVDVEPVD 240

Query: 241 VVVEHVLKQILSQETQYLPITRGSNVVLLINGLGATPIMELMIAARKAVPELQLEYGIAV 300
           VVV HVL+QILS ET Y+PITRG+ VVL++NGLG TP+MELMIAA KAVP+LQLE+G+AV
Sbjct: 241 VVVSHVLQQILSPETNYVPITRGNRVVLMVNGLGGTPLMELMIAAGKAVPKLQLEFGLAV 300

Query: 301 DRVYTGTLMTSLDMAGFSITIMRSDENILQRLDAPTKAPAWPVGSEGNRPPAKIXXXXXX 360
           DRVYTG  MTSLDMAGFSI+IM++D +IL RLDAPTKAP WPVG++GNRPPAKI      
Sbjct: 301 DRVYTGFFMTSLDMAGFSISIMKADHSILDRLDAPTKAPNWPVGTDGNRPPAKIPVPVPP 360

Query: 361 XXXGKDDEILTEPQELSKQGCXXXXXXXXXXXXXXXXKDNLNEWDSKVGDGDCGTTMYRG 420
               K  E  + P ELSK+G                 KD+LNEWD KVGDGDCG+TMYRG
Sbjct: 361 SRSIKSMESQSRPLELSKEGQVLEAAIQAAATVIISLKDSLNEWDGKVGDGDCGSTMYRG 420

Query: 421 ATTILEDLKKRYPMNDAAGTINEIGSTVRRVMGGTSGILYDILCKAAYASLKQN--TSIG 478
           AT ILED+K  YP+NDAA T+NEIG +++R MGGTSGI+Y +LCKAAYA LK N  + + 
Sbjct: 421 ATAILEDMKNYYPLNDAAETVNEIGLSIKRAMGGTSGIIYHLLCKAAYAELKANAQSEVT 480

Query: 479 ANEWADALEASVAAVSKYGGASAGYRTMLDALIPACTVLKQSLKAGDDPVTAFIXXXXXX 538
              W++AL++S+A+VSKYGGA+AGYRTMLDALIPA  VL++ L AG+DP++AFI      
Sbjct: 481 PKNWSEALKSSIASVSKYGGATAGYRTMLDALIPASQVLEEKLSAGEDPISAFILSGEAA 540

Query: 539 XXXXXXTKQMQAKAGRSSYIAPDLVASVPDPG 570
                 T QMQA+AGRSSY++ + +A+VPDPG
Sbjct: 541 TAGAESTIQMQAQAGRSSYVSAENLATVPDPG 572



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.316    0.135    0.388 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 10,973,593
Number of extensions: 407894
Number of successful extensions: 804
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 797
Number of HSP's successfully gapped: 2
Length of query: 594
Length of database: 11,106,569
Length adjustment: 104
Effective length of query: 490
Effective length of database: 8,255,305
Effective search space: 4045099450
Effective search space used: 4045099450
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 115 (48.9 bits)