BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0718500 Os03g0718500|Os03g0718500
(238 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G24660.1 | chr4:12724851-12725513 REVERSE LENGTH=221 114 5e-26
AT5G60480.1 | chr5:24323594-24324169 FORWARD LENGTH=192 95 4e-20
AT2G18350.1 | chr2:7971122-7971910 REVERSE LENGTH=263 86 2e-17
AT1G75240.1 | chr1:28241576-28242505 FORWARD LENGTH=310 82 4e-16
AT5G15210.1 | chr5:4937874-4938689 REVERSE LENGTH=272 79 3e-15
AT3G28920.1 | chr3:10940598-10941536 REVERSE LENGTH=313 75 3e-14
AT1G14440.1 | chr1:4939076-4940014 REVERSE LENGTH=313 74 6e-14
AT5G65410.1 | chr5:26136179-26137018 FORWARD LENGTH=280 74 6e-14
AT5G39760.1 | chr5:15911543-15912547 FORWARD LENGTH=335 74 8e-14
AT2G02540.1 | chr2:684302-685234 FORWARD LENGTH=311 72 2e-13
AT3G50890.1 | chr3:18916420-18917169 FORWARD LENGTH=250 70 8e-13
AT1G14687.1 | chr1:5048046-5048552 FORWARD LENGTH=169 69 2e-12
AT1G69600.1 | chr1:26182470-26183198 FORWARD LENGTH=243 68 5e-12
AT5G42780.1 | chr5:17154841-17155569 FORWARD LENGTH=243 67 1e-11
AT1G18835.1 | chr1:6496106-6496372 REVERSE LENGTH=89 62 3e-10
AT3G28917.1 | chr3:10925014-10925316 FORWARD LENGTH=101 61 6e-10
AT1G74660.1 | chr1:28047742-28048050 REVERSE LENGTH=103 60 8e-10
>AT4G24660.1 | chr4:12724851-12725513 REVERSE LENGTH=221
Length = 220
Score = 114 bits (285), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 67/172 (38%), Positives = 82/172 (47%), Gaps = 9/172 (5%)
Query: 12 YRECMRNHAAKLGTYANDGCCEYTP--DDGHPAGLLCAACGCHRNFHRKDFLDXXXXXXX 69
YREC++NHA +G +A DGCCE+ P +DG L CAACGCHRNFHRK+ +
Sbjct: 49 YRECLKNHAVNIGGHAVDGCCEFMPSGEDGTLDALKCAACGCHRNFHRKE-TESIGGRAH 107
Query: 70 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRRTRTKFTEE 129
+R RTKFT E
Sbjct: 108 RVPTYYNRPPQPHQPPGYLHLTSPAAPYRPPAASGDEEDTSNPSSSGGTTKRFRTKFTAE 167
Query: 130 QKARMLRFAERLGWRMPKREPGRAPGDDEVARFCREIGVNRQVFKVWMHNHK 181
QK +ML FAERLGWR+ K + D V +FC E GV RQV K+WMHN+K
Sbjct: 168 QKEKMLAFAERLGWRIQKHD------DVAVEQFCAETGVRRQVLKIWMHNNK 213
>AT5G60480.1 | chr5:24323594-24324169 FORWARD LENGTH=192
Length = 191
Score = 94.7 bits (234), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 76/177 (42%), Gaps = 15/177 (8%)
Query: 11 VYRECMRNHAAKLGTYANDGCCEYTPDD----GHPAGLLCAACGCHRNFHRKDFLDXXXX 66
+Y EC++NHA LG +A DGC E+TP P L C ACGCHRNFHR+ D
Sbjct: 4 LYNECLKNHAVSLGGHALDGCGEFTPKSTTILTDPPSLRCDACGCHRNFHRRSPSDGFSQ 63
Query: 67 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRRTRTKF 126
+ + RTKF
Sbjct: 64 HRSPPSPLQLQPLAPVPNLLLSLSSGFFGPSDQEVKNKFTVERDVRKTAMIKKHK-RTKF 122
Query: 127 TEEQKARMLRFAERLGWRMPKREPGRAPGDDE--VARFCREIGVNRQVFKVWMHNHK 181
T EQK +M FAER GW++ G DE V FC E+G+ R+V KVW+HN+K
Sbjct: 123 TAEQKVKMRGFAERAGWKI--------NGWDEKWVREFCSEVGIERKVLKVWIHNNK 171
>AT2G18350.1 | chr2:7971122-7971910 REVERSE LENGTH=263
Length = 262
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 41/63 (65%), Positives = 48/63 (76%), Gaps = 6/63 (9%)
Query: 119 RRRTRTKFTEEQKARMLRFAERLGWRMPKREPGRAPGDDEVARFCREIGVNRQVFKVWMH 178
++R RTKF EEQK +M+ FAE++GWRM K E DDEV RFCREI V RQVFKVWMH
Sbjct: 198 KKRFRTKFNEEQKEKMMEFAEKIGWRMTKLE------DDEVNRFCREIKVKRQVFKVWMH 251
Query: 179 NHK 181
N+K
Sbjct: 252 NNK 254
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 35/51 (68%), Gaps = 2/51 (3%)
Query: 12 YRECMRNHAAKLGTYANDGCCEY--TPDDGHPAGLLCAACGCHRNFHRKDF 60
YREC +NHAA G + DGC E+ + ++G LLCAAC CHR+FHRK+
Sbjct: 82 YRECQKNHAASSGGHVVDGCGEFMSSGEEGTVESLLCAACDCHRSFHRKEI 132
>AT1G75240.1 | chr1:28241576-28242505 FORWARD LENGTH=310
Length = 309
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 38/63 (60%), Positives = 49/63 (77%), Gaps = 6/63 (9%)
Query: 119 RRRTRTKFTEEQKARMLRFAERLGWRMPKREPGRAPGDDEVARFCREIGVNRQVFKVWMH 178
++R RTKFT +QK RM+ FAE+LGWRM K++ ++E+ RFC EIGV RQVFKVWMH
Sbjct: 240 KKRFRTKFTTDQKERMMDFAEKLGWRMNKQD------EEELKRFCGEIGVKRQVFKVWMH 293
Query: 179 NHK 181
N+K
Sbjct: 294 NNK 296
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 7 RPREVYRECMRNHAAKLGTYANDGCCEYTP--DDGHPAGLLCAACGCHRNFHRKDF 60
+P YREC++NHAA +G +DGC E+ P ++G L CAAC CHRNFHRK+
Sbjct: 71 KPTVRYRECLKNHAASVGGSVHDGCGEFMPSGEEGTIEALRCAACDCHRNFHRKEM 126
>AT5G15210.1 | chr5:4937874-4938689 REVERSE LENGTH=272
Length = 271
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 46/63 (73%), Gaps = 6/63 (9%)
Query: 119 RRRTRTKFTEEQKARMLRFAERLGWRMPKREPGRAPGDDEVARFCREIGVNRQVFKVWMH 178
R+R RTKF++ QK +M F+ER+GWRMPK + D V FCREIGV++ VFKVWMH
Sbjct: 179 RKRFRTKFSQYQKEKMFEFSERVGWRMPKAD------DVVVKEFCREIGVDKSVFKVWMH 232
Query: 179 NHK 181
N+K
Sbjct: 233 NNK 235
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 38/53 (71%), Gaps = 4/53 (7%)
Query: 11 VYRECMRNHAAKLGTYANDGCCEYTP----DDGHPAGLLCAACGCHRNFHRKD 59
Y+EC++NHAA +G +A DGC E+ P + PA L CAACGCHRNFHR++
Sbjct: 55 TYKECLKNHAAGIGGHALDGCGEFMPSPSFNSNDPASLTCAACGCHRNFHRRE 107
>AT3G28920.1 | chr3:10940598-10941536 REVERSE LENGTH=313
Length = 312
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 46/63 (73%), Gaps = 6/63 (9%)
Query: 119 RRRTRTKFTEEQKARMLRFAERLGWRMPKREPGRAPGDDEVARFCREIGVNRQVFKVWMH 178
R+R RTKF+ QK +M FA+R+GW++ KR+ +DEV FCREIGV++ V KVWMH
Sbjct: 192 RKRFRTKFSSNQKEKMHEFADRIGWKIQKRD------EDEVRDFCREIGVDKGVLKVWMH 245
Query: 179 NHK 181
N+K
Sbjct: 246 NNK 248
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 4/56 (7%)
Query: 11 VYRECMRNHAAKLGTYANDGCCEY----TPDDGHPAGLLCAACGCHRNFHRKDFLD 62
Y+EC++NHAA +G +A DGC E+ + P L CAACGCHRNFHR++ D
Sbjct: 51 TYKECLKNHAAAIGGHALDGCGEFMPSPSSTPSDPTSLKCAACGCHRNFHRRETDD 106
>AT1G14440.1 | chr1:4939076-4940014 REVERSE LENGTH=313
Length = 312
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 46/63 (73%), Gaps = 6/63 (9%)
Query: 119 RRRTRTKFTEEQKARMLRFAERLGWRMPKREPGRAPGDDEVARFCREIGVNRQVFKVWMH 178
++R RTKFT EQK +ML FAE++GW++ ++E D V RFC EIGV R+V KVWMH
Sbjct: 218 KKRFRTKFTPEQKEKMLSFAEKVGWKIQRQE------DCVVQRFCEEIGVKRRVLKVWMH 271
Query: 179 NHK 181
N+K
Sbjct: 272 NNK 274
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 39/57 (68%), Gaps = 2/57 (3%)
Query: 6 ERPREVYRECMRNHAAKLGTYANDGCCEYTP--DDGHPAGLLCAACGCHRNFHRKDF 60
++P Y+EC++NHAA +G A DGC E+ P +DG L C+AC CHRNFHRK+
Sbjct: 84 KKPMIKYKECLKNHAAAMGGNATDGCGEFMPSGEDGSIEALTCSACNCHRNFHRKEV 140
>AT5G65410.1 | chr5:26136179-26137018 FORWARD LENGTH=280
Length = 279
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 46/63 (73%), Gaps = 6/63 (9%)
Query: 119 RRRTRTKFTEEQKARMLRFAERLGWRMPKREPGRAPGDDEVARFCREIGVNRQVFKVWMH 178
R+R RTKFT EQK RML AER+GWR+ +++ D+ + RFC+E GV RQV KVW+H
Sbjct: 191 RKRHRTKFTAEQKERMLALAERIGWRIQRQD------DEVIQRFCQETGVPRQVLKVWLH 244
Query: 179 NHK 181
N+K
Sbjct: 245 NNK 247
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 35/51 (68%), Gaps = 2/51 (3%)
Query: 12 YRECMRNHAAKLGTYANDGCCEYTPD--DGHPAGLLCAACGCHRNFHRKDF 60
+REC++N A +G +A DGC E+ P +G L CAACGCHRNFHRK+
Sbjct: 75 FRECLKNQAVNIGGHAVDGCGEFMPAGIEGTIDALKCAACGCHRNFHRKEL 125
>AT5G39760.1 | chr5:15911543-15912547 FORWARD LENGTH=335
Length = 334
Score = 73.6 bits (179), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 47/63 (74%), Gaps = 6/63 (9%)
Query: 119 RRRTRTKFTEEQKARMLRFAERLGWRMPKREPGRAPGDDEVARFCREIGVNRQVFKVWMH 178
R+R RTKF++ QK +M FAER+GW+M KR+ +D+V FCR+IGV++ V KVWMH
Sbjct: 200 RKRFRTKFSQFQKEKMHEFAERVGWKMQKRD------EDDVRDFCRQIGVDKSVLKVWMH 253
Query: 179 NHK 181
N+K
Sbjct: 254 NNK 256
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 36/53 (67%), Gaps = 4/53 (7%)
Query: 11 VYRECMRNHAAKLGTYANDGCCEY----TPDDGHPAGLLCAACGCHRNFHRKD 59
Y+EC++NHAA LG +A DGC E+ + P L CAACGCHRNFHR+D
Sbjct: 55 TYKECLKNHAAALGGHALDGCGEFMPSPSSISSDPTSLKCAACGCHRNFHRRD 107
>AT2G02540.1 | chr2:684302-685234 FORWARD LENGTH=311
Length = 310
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 47/63 (74%), Gaps = 6/63 (9%)
Query: 119 RRRTRTKFTEEQKARMLRFAERLGWRMPKREPGRAPGDDEVARFCREIGVNRQVFKVWMH 178
++R RTKFT+EQK +M+ FAER+GW++ ++E + V + C+EIG+ R+V KVWMH
Sbjct: 222 KKRFRTKFTQEQKEKMISFAERVGWKIQRQE------ESVVQQLCQEIGIRRRVLKVWMH 275
Query: 179 NHK 181
N+K
Sbjct: 276 NNK 278
Score = 63.5 bits (153), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 41/59 (69%), Gaps = 3/59 (5%)
Query: 4 QQERPREV-YRECMRNHAAKLGTYANDGCCEYTP--DDGHPAGLLCAACGCHRNFHRKD 59
++E+P + Y+EC++NHAA +G A DGC E+ P ++G L C+ C CHRNFHR++
Sbjct: 78 KKEKPVVIKYKECLKNHAATMGGNAIDGCGEFMPSGEEGSIEALTCSVCNCHRNFHRRE 136
>AT3G50890.1 | chr3:18916420-18917169 FORWARD LENGTH=250
Length = 249
Score = 70.5 bits (171), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 42/58 (72%), Gaps = 6/58 (10%)
Query: 124 TKFTEEQKARMLRFAERLGWRMPKREPGRAPGDDEVARFCREIGVNRQVFKVWMHNHK 181
TK EEQK +M FAERLGWRM K++ ++E+ +FCR + + RQVFKVWMHN+K
Sbjct: 186 TKINEEQKEKMKEFAERLGWRMQKKD------EEEIDKFCRMVNLRRQVFKVWMHNNK 237
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
Query: 12 YRECMRNHAAKLGTYANDGCCEYTP--DDGHPAGLLCAACGCHRNFHRKDF 60
YREC +NHAA G + DGCCE+ ++G L CAAC CHR+FHRK+
Sbjct: 60 YRECQKNHAASTGGHVVDGCCEFMAGGEEGTLGALKCAACNCHRSFHRKEV 110
>AT1G14687.1 | chr1:5048046-5048552 FORWARD LENGTH=169
Length = 168
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/48 (66%), Positives = 37/48 (77%), Gaps = 3/48 (6%)
Query: 11 VYRECMRNHAAKLGTYANDGCCEYTPDDGHPAGLLCAACGCHRNFHRK 58
VYRECMRNHAAKLG+YA DGC EY+ G LC ACGCHR++HR+
Sbjct: 6 VYRECMRNHAAKLGSYAIDGCREYSQPS---TGDLCVACGCHRSYHRR 50
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 38/63 (60%), Gaps = 4/63 (6%)
Query: 119 RRRTRTKFTEEQKARMLRFAERLGWRMPKREPGRAPGDDEVARFCREIGVNRQVFKVWMH 178
+RR ++KFT EQ+ M +A +LGW + + R +E+ FC IGV R FK W++
Sbjct: 106 QRRRKSKFTAEQREAMKDYAAKLGWTLKDKRALR----EEIRVFCEGIGVTRYHFKTWVN 161
Query: 179 NHK 181
N+K
Sbjct: 162 NNK 164
>AT1G69600.1 | chr1:26182470-26183198 FORWARD LENGTH=243
Length = 242
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 37/52 (71%), Gaps = 4/52 (7%)
Query: 12 YRECMRNHAAKLGTYANDGCCEYTPD----DGHPAGLLCAACGCHRNFHRKD 59
Y+EC++NHAA LG +A DGC E+ P P+ L CAACGCHRNFHR+D
Sbjct: 31 YKECLKNHAANLGGHALDGCGEFMPSPTATSTDPSSLRCAACGCHRNFHRRD 82
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 40/63 (63%), Gaps = 6/63 (9%)
Query: 119 RRRTRTKFTEEQKARMLRFAERLGWRMPKREPGRAPGDDEVARFCREIGVNRQVFKVWMH 178
R+RTRTKFT EQK +M FAE+ GW++ + V FC E+G+ R V KVWMH
Sbjct: 156 RKRTRTKFTPEQKIKMRAFAEKAGWKI------NGCDEKSVREFCNEVGIERGVLKVWMH 209
Query: 179 NHK 181
N+K
Sbjct: 210 NNK 212
>AT5G42780.1 | chr5:17154841-17155569 FORWARD LENGTH=243
Length = 242
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 34/50 (68%)
Query: 12 YRECMRNHAAKLGTYANDGCCEYTPDDGHPAGLLCAACGCHRNFHRKDFL 61
Y EC +NHAA +GT A DGC E+ G L CAACGCHRNFHR++ +
Sbjct: 64 YYECRKNHAADIGTTAYDGCGEFVSSTGEEDSLNCAACGCHRNFHREELI 113
Score = 60.8 bits (146), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 44/63 (69%), Gaps = 8/63 (12%)
Query: 120 RRTRTKFTEEQKARMLRFAERLGWRM-PKREPGRAPGDDEVARFCREIGVNRQVFKVWMH 178
+R +TKFT EQ +M +AE+L W++ P+R+ +EV FC EIGVNR+ F++WM+
Sbjct: 180 KRLKTKFTAEQTEKMRDYAEKLRWKVRPERQ-------EEVEEFCVEIGVNRKNFRIWMN 232
Query: 179 NHK 181
NHK
Sbjct: 233 NHK 235
>AT1G18835.1 | chr1:6496106-6496372 REVERSE LENGTH=89
Length = 88
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Query: 12 YRECMRNHAAKLGTYANDGCCEYTPDDGHPAGLLCAACGCHRNFHRKDF 60
Y EC +NHAA +G YA DGC E+ G A L CAACGCHRNFHR++
Sbjct: 26 YVECQKNHAANIGGYAVDGCREFMASGGDDA-LTCAACGCHRNFHRREV 73
>AT3G28917.1 | chr3:10925014-10925316 FORWARD LENGTH=101
Length = 100
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 36/52 (69%), Gaps = 3/52 (5%)
Query: 12 YRECMRNHAAKLGTYANDGCCEYTP---DDGHPAGLLCAACGCHRNFHRKDF 60
Y EC +NHAA +G YA DGC E+ ++G A L CAACGCHR+FHR++
Sbjct: 33 YGECQKNHAAAVGGYAVDGCREFMASRGEEGTVAALTCAACGCHRSFHRREI 84
>AT1G74660.1 | chr1:28047742-28048050 REVERSE LENGTH=103
Length = 102
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
Query: 12 YRECMRNHAAKLGTYANDGCCEYTPD--DGHPAGLLCAACGCHRNFHRKDF 60
Y EC +NHAA +G YA DGC E+ +G L CAACGCHRNFHRK+
Sbjct: 39 YVECQKNHAANIGGYAVDGCREFMAAGVEGTVDALRCAACGCHRNFHRKEV 89
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.326 0.138 0.459
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 3,255,655
Number of extensions: 100254
Number of successful extensions: 279
Number of sequences better than 1.0e-05: 17
Number of HSP's gapped: 249
Number of HSP's successfully gapped: 31
Length of query: 238
Length of database: 11,106,569
Length adjustment: 96
Effective length of query: 142
Effective length of database: 8,474,633
Effective search space: 1203397886
Effective search space used: 1203397886
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 110 (47.0 bits)