BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0718000 Os03g0718000|AK105178
(273 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G57890.1 | chr5:23447648-23449622 REVERSE LENGTH=274 354 3e-98
AT1G25155.1 | chr1:8823052-8824821 REVERSE LENGTH=223 344 3e-95
AT1G24909.1 | chr1:8786145-8787914 REVERSE LENGTH=223 344 3e-95
AT1G25083.1 | chr1:8808674-8810443 REVERSE LENGTH=223 344 3e-95
AT1G25220.2 | chr1:8837430-8839478 REVERSE LENGTH=290 344 4e-95
AT1G24807.1 | chr1:8771766-8773535 REVERSE LENGTH=236 335 2e-92
AT2G28880.1 | chr2:12398937-12403108 REVERSE LENGTH=920 105 3e-23
AT3G27740.1 | chr3:10281470-10283792 REVERSE LENGTH=431 59 2e-09
>AT5G57890.1 | chr5:23447648-23449622 REVERSE LENGTH=274
Length = 273
Score = 354 bits (908), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 162/226 (71%), Positives = 195/226 (86%)
Query: 43 KQKLVAKSAVSVVEGENAFDGVKQDTRPIIVIDNYDSFTYNLCQYMGEVGANFEVYRNDD 102
++ ++AK+++ + E + V + PIIVIDNYDSFTYNLCQYMGE+G +FEVYRND+
Sbjct: 44 RRDVIAKASIEMAESNSISSVVVNSSGPIIVIDNYDSFTYNLCQYMGELGCHFEVYRNDE 103
Query: 103 ITVEEIKKISPRGILISPGPGTPQDSGISLQTVQDLGPSTPLFGVCMGLQCIGEAFGGKV 162
+TVEE+K+ PRG+LISPGPGTPQDSGISLQTV +LGP PLFGVCMGLQCIGEAFGGK+
Sbjct: 104 LTVEELKRKKPRGLLISPGPGTPQDSGISLQTVLELGPLVPLFGVCMGLQCIGEAFGGKI 163
Query: 163 VRSPYGVVHGKGSLVHYEEKLDGTLFSGLPNPFQAGRYHSLVIEKDSFPHDALEITAWTD 222
VRSP+GV+HGK S+VHY+EK + LFSGL NPF GRYHSLVIEKDSFP D LE+TAWT+
Sbjct: 164 VRSPFGVMHGKSSMVHYDEKGEEGLFSGLSNPFLVGRYHSLVIEKDSFPSDELEVTAWTE 223
Query: 223 DGLIMAARHRKYKHIQGVQFHPESIITTEGRLMVKNFIKIIEGYEA 268
DGL+MAARHRKYKHIQGVQFHPESIITTEG+ +V+NFIK++E E+
Sbjct: 224 DGLVMAARHRKYKHIQGVQFHPESIITTEGKTIVRNFIKLVEKKES 269
>AT1G25155.1 | chr1:8823052-8824821 REVERSE LENGTH=223
Length = 222
Score = 344 bits (882), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 156/195 (80%), Positives = 179/195 (91%)
Query: 70 PIIVIDNYDSFTYNLCQYMGEVGANFEVYRNDDITVEEIKKISPRGILISPGPGTPQDSG 129
PIIVIDNYDSFTYNLCQYMGE+ +FEVYRND++TVEE+K+ +PRG+LISPGPGTPQDSG
Sbjct: 20 PIIVIDNYDSFTYNLCQYMGELQCHFEVYRNDELTVEELKRKNPRGVLISPGPGTPQDSG 79
Query: 130 ISLQTVQDLGPSTPLFGVCMGLQCIGEAFGGKVVRSPYGVVHGKGSLVHYEEKLDGTLFS 189
ISLQTV +LGP PLFGVCMGLQCIGEAFGGK+VRSP+GV+HGK S+VHY+EK + LFS
Sbjct: 80 ISLQTVLELGPLVPLFGVCMGLQCIGEAFGGKIVRSPFGVMHGKSSMVHYDEKGEEGLFS 139
Query: 190 GLPNPFQAGRYHSLVIEKDSFPHDALEITAWTDDGLIMAARHRKYKHIQGVQFHPESIIT 249
GL NPF GRYHSLVIEKD+FP D LE+TAWT+DGL+MAARHRKYKHIQGVQFHPESIIT
Sbjct: 140 GLSNPFIVGRYHSLVIEKDTFPSDELEVTAWTEDGLVMAARHRKYKHIQGVQFHPESIIT 199
Query: 250 TEGRLMVKNFIKIIE 264
TEG+ +V+NFIKI+E
Sbjct: 200 TEGKTIVRNFIKIVE 214
>AT1G24909.1 | chr1:8786145-8787914 REVERSE LENGTH=223
Length = 222
Score = 344 bits (882), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 156/195 (80%), Positives = 179/195 (91%)
Query: 70 PIIVIDNYDSFTYNLCQYMGEVGANFEVYRNDDITVEEIKKISPRGILISPGPGTPQDSG 129
PIIVIDNYDSFTYNLCQYMGE+ +FEVYRND++TVEE+K+ +PRG+LISPGPGTPQDSG
Sbjct: 20 PIIVIDNYDSFTYNLCQYMGELQCHFEVYRNDELTVEELKRKNPRGVLISPGPGTPQDSG 79
Query: 130 ISLQTVQDLGPSTPLFGVCMGLQCIGEAFGGKVVRSPYGVVHGKGSLVHYEEKLDGTLFS 189
ISLQTV +LGP PLFGVCMGLQCIGEAFGGK+VRSP+GV+HGK S+VHY+EK + LFS
Sbjct: 80 ISLQTVLELGPLVPLFGVCMGLQCIGEAFGGKIVRSPFGVMHGKSSMVHYDEKGEEGLFS 139
Query: 190 GLPNPFQAGRYHSLVIEKDSFPHDALEITAWTDDGLIMAARHRKYKHIQGVQFHPESIIT 249
GL NPF GRYHSLVIEKD+FP D LE+TAWT+DGL+MAARHRKYKHIQGVQFHPESIIT
Sbjct: 140 GLSNPFIVGRYHSLVIEKDTFPSDELEVTAWTEDGLVMAARHRKYKHIQGVQFHPESIIT 199
Query: 250 TEGRLMVKNFIKIIE 264
TEG+ +V+NFIKI+E
Sbjct: 200 TEGKTIVRNFIKIVE 214
>AT1G25083.1 | chr1:8808674-8810443 REVERSE LENGTH=223
Length = 222
Score = 344 bits (882), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 156/195 (80%), Positives = 179/195 (91%)
Query: 70 PIIVIDNYDSFTYNLCQYMGEVGANFEVYRNDDITVEEIKKISPRGILISPGPGTPQDSG 129
PIIVIDNYDSFTYNLCQYMGE+ +FEVYRND++TVEE+K+ +PRG+LISPGPGTPQDSG
Sbjct: 20 PIIVIDNYDSFTYNLCQYMGELQCHFEVYRNDELTVEELKRKNPRGVLISPGPGTPQDSG 79
Query: 130 ISLQTVQDLGPSTPLFGVCMGLQCIGEAFGGKVVRSPYGVVHGKGSLVHYEEKLDGTLFS 189
ISLQTV +LGP PLFGVCMGLQCIGEAFGGK+VRSP+GV+HGK S+VHY+EK + LFS
Sbjct: 80 ISLQTVLELGPLVPLFGVCMGLQCIGEAFGGKIVRSPFGVMHGKSSMVHYDEKGEEGLFS 139
Query: 190 GLPNPFQAGRYHSLVIEKDSFPHDALEITAWTDDGLIMAARHRKYKHIQGVQFHPESIIT 249
GL NPF GRYHSLVIEKD+FP D LE+TAWT+DGL+MAARHRKYKHIQGVQFHPESIIT
Sbjct: 140 GLSNPFIVGRYHSLVIEKDTFPSDELEVTAWTEDGLVMAARHRKYKHIQGVQFHPESIIT 199
Query: 250 TEGRLMVKNFIKIIE 264
TEG+ +V+NFIKI+E
Sbjct: 200 TEGKTIVRNFIKIVE 214
>AT1G25220.2 | chr1:8837430-8839478 REVERSE LENGTH=290
Length = 289
Score = 344 bits (882), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 163/242 (67%), Positives = 196/242 (80%), Gaps = 16/242 (6%)
Query: 43 KQKLVAKSAVSVVEGENAFDGVKQDTR---PIIVIDNYDSFTYNLCQY------------ 87
++ + AK+++ + E + V ++ PIIVIDNYDSFTYNLCQY
Sbjct: 44 RRDVFAKASIEMAESNSIPSVVVNSSKQHGPIIVIDNYDSFTYNLCQYKQNFENCYLFLQ 103
Query: 88 -MGEVGANFEVYRNDDITVEEIKKISPRGILISPGPGTPQDSGISLQTVQDLGPSTPLFG 146
MGE+G +FEVYRND++TVEE+KK +PRG+LISPGPGTPQDSGISLQTV +LGP PLFG
Sbjct: 104 YMGELGCHFEVYRNDELTVEELKKKNPRGVLISPGPGTPQDSGISLQTVLELGPLVPLFG 163
Query: 147 VCMGLQCIGEAFGGKVVRSPYGVVHGKGSLVHYEEKLDGTLFSGLPNPFQAGRYHSLVIE 206
VCMGLQCIGEAFGGK+VRSP+GV+HGK S+VHY+EK + LFSGL NPF GRYHSLVIE
Sbjct: 164 VCMGLQCIGEAFGGKIVRSPFGVMHGKSSMVHYDEKGEEGLFSGLSNPFIVGRYHSLVIE 223
Query: 207 KDSFPHDALEITAWTDDGLIMAARHRKYKHIQGVQFHPESIITTEGRLMVKNFIKIIEGY 266
KD+FP D LE+TAWT+DGL+MAARHRKYKHIQGVQFHPESIITTEG+ +V+NFIKI+E
Sbjct: 224 KDTFPSDELEVTAWTEDGLVMAARHRKYKHIQGVQFHPESIITTEGKTIVRNFIKIVEKK 283
Query: 267 EA 268
E+
Sbjct: 284 ES 285
>AT1G24807.1 | chr1:8771766-8773535 REVERSE LENGTH=236
Length = 235
Score = 335 bits (859), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 156/208 (75%), Positives = 179/208 (86%), Gaps = 13/208 (6%)
Query: 70 PIIVIDNYDSFTYNLCQY-------------MGEVGANFEVYRNDDITVEEIKKISPRGI 116
PIIVIDNYDSFTYNLCQY MGE+ +FEVYRND++TVEE+K+ +PRG+
Sbjct: 20 PIIVIDNYDSFTYNLCQYKQNFENCYLFLQYMGELQCHFEVYRNDELTVEELKRKNPRGV 79
Query: 117 LISPGPGTPQDSGISLQTVQDLGPSTPLFGVCMGLQCIGEAFGGKVVRSPYGVVHGKGSL 176
LISPGPGTPQDSGISLQTV +LGP PLFGVCMGLQCIGEAFGGK+VRSP+GV+HGK S+
Sbjct: 80 LISPGPGTPQDSGISLQTVLELGPLVPLFGVCMGLQCIGEAFGGKIVRSPFGVMHGKSSM 139
Query: 177 VHYEEKLDGTLFSGLPNPFQAGRYHSLVIEKDSFPHDALEITAWTDDGLIMAARHRKYKH 236
VHY+EK + LFSGL NPF GRYHSLVIEKD+FP D LE+TAWT+DGL+MAARHRKYKH
Sbjct: 140 VHYDEKGEEGLFSGLSNPFIVGRYHSLVIEKDTFPSDELEVTAWTEDGLVMAARHRKYKH 199
Query: 237 IQGVQFHPESIITTEGRLMVKNFIKIIE 264
IQGVQFHPESIITTEG+ +V+NFIKI+E
Sbjct: 200 IQGVQFHPESIITTEGKTIVRNFIKIVE 227
>AT2G28880.1 | chr2:12398937-12403108 REVERSE LENGTH=920
Length = 919
Score = 105 bits (262), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/259 (31%), Positives = 120/259 (46%), Gaps = 71/259 (27%)
Query: 72 IVIDNYDSFTYNLCQYMGEV-GANFEVYRNDDITVEE-----IKKISPRGILISPGPGTP 125
++IDNYDS+T+N+ Q + + G V RND+ T EE + ++ I+ISPGPG+P
Sbjct: 88 LLIDNYDSYTFNIYQALSTINGVPPVVIRNDEWTWEEAYHYLYEDVAFDNIVISPGPGSP 147
Query: 126 Q---DSGISLQTVQDLGPSTPLFGVCMGLQCIGEAFGGKVVRSPYGVVHGKGSLVHYEEK 182
D GI L+ + + P+ GVC+G Q +G G VV +P VHG+ S + ++
Sbjct: 148 MCPADIGICLRLLLECR-DIPILGVCLGHQALGYVHGAHVVHAP-EPVHGRLSGIEHDGN 205
Query: 183 LDGTLFSGLPN----PFQAGRYHSLVIEKDSFPHDALEITAWT----------------- 221
+ LFS +P+ F+ RYHSL+I+K+S P + + I AWT
Sbjct: 206 I---LFSDIPSGRNSDFKVVRYHSLIIDKESLPKELVPI-AWTIYDDTGSFSEKNSCVPV 261
Query: 222 ----------------------------------DDGLIMAARHRKYKHIQGVQFHPESI 247
D ++M H + H G+QFHPESI
Sbjct: 262 NNTGSPLGNGSVIPVSEKLENRSHWPSSHVNGKQDRHILMGIMHSSFPHY-GLQFHPESI 320
Query: 248 ITTEGRLMVKNFIKIIEGY 266
TT G + KNF I Y
Sbjct: 321 ATTYGSQLFKNFKDITVNY 339
>AT3G27740.1 | chr3:10281470-10283792 REVERSE LENGTH=431
Length = 430
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 89/208 (42%), Gaps = 15/208 (7%)
Query: 42 LKQKLVAKSAVSVVEGENA---FDGVKQDTRPIIVIDNYDSFTYNLCQYMGEVGANFEVY 98
L + KS V+ NA F+ +D + VI N+ + + G V
Sbjct: 210 LISDVSCKSPYEWVDKTNAEWDFNTNSRDGKSYKVIAYDFGIKQNILRRLSSYGCQITVV 269
Query: 99 RNDDITVEEIKKISPRGILISPGPGTPQDSGISLQTVQDLGPSTPLFGVCMGLQCIGEAF 158
+ E K++P GIL S GPG P +++TV++L P++G+CMG Q +G+A
Sbjct: 270 PST-FPAAEALKMNPDGILFSNGPGDPSAVPYAVETVKELLGKVPVYGICMGHQLLGQAL 328
Query: 159 GGKVVRSPYGVVHGKGSLVHYEEKLDGTLFSGLPNPFQAGRYHSLVIEKDSFPHDALEIT 218
GGK + +G HG V + + + H+ ++ S P +E+T
Sbjct: 329 GGKTFKMKFG-HHGGNHPVRNNRTGQVEI---------SAQNHNYAVDPASLP-GGVEVT 377
Query: 219 AWTDDGLIMAARHRKYKHIQGVQFHPES 246
+ A ++ +Q+HPE+
Sbjct: 378 HVNLNDGSCAGLSFPEMNVMSLQYHPEA 405
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.318 0.137 0.406
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 6,256,732
Number of extensions: 282259
Number of successful extensions: 581
Number of sequences better than 1.0e-05: 8
Number of HSP's gapped: 577
Number of HSP's successfully gapped: 8
Length of query: 273
Length of database: 11,106,569
Length adjustment: 97
Effective length of query: 176
Effective length of database: 8,447,217
Effective search space: 1486710192
Effective search space used: 1486710192
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 111 (47.4 bits)