BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0712700 Os03g0712700|AK072313
(582 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G70730.3 | chr1:26669020-26673166 REVERSE LENGTH=663 1026 0.0
AT1G23190.1 | chr1:8219946-8224186 FORWARD LENGTH=584 1008 0.0
AT5G51820.1 | chr5:21063531-21067933 REVERSE LENGTH=624 682 0.0
>AT1G70730.3 | chr1:26669020-26673166 REVERSE LENGTH=663
Length = 662
Score = 1026 bits (2654), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 495/585 (84%), Positives = 536/585 (91%), Gaps = 3/585 (0%)
Query: 1 MVLFSVTKKATTPFDGQKPGTSGLRKKVTVFQQPHYLQNFVQSTFNALPADKVKGATIVV 60
MV F V+ +T+P DGQKPGTSGLRKKV VF+QP+YL+NFVQ+TFNAL +KVKGAT+VV
Sbjct: 78 MVSFKVSLVSTSPIDGQKPGTSGLRKKVKVFKQPNYLENFVQATFNALTTEKVKGATLVV 137
Query: 61 SGDGRYFSKDAVQIITKMAAANGVRRVWVGQNSLMSTPAVSAVIRERVGADGSKATGAFI 120
SGDGRY+S+ A+QII KMAAANGVRRVWVGQNSL+STPAVSA+IRERVGADGSKATGAFI
Sbjct: 138 SGDGRYYSEQAIQIIVKMAAANGVRRVWVGQNSLLSTPAVSAIIRERVGADGSKATGAFI 197
Query: 121 LTASHNPGGPTEDFGIKYNMENGGPAPESVTDKIFSNTTTITEYLIAEDLPDVDISVVGV 180
LTASHNPGGPTEDFGIKYNMENGGPAPES+TDKI+ NT TI EY IAEDLP VDIS +G+
Sbjct: 198 LTASHNPGGPTEDFGIKYNMENGGPAPESITDKIYENTKTIKEYPIAEDLPRVDISTIGI 257
Query: 181 TTFSGPEGPFDVDVFDSTIDYIKLMKTIFDFESIKKLLASPKFTFCYDALHGVAGTYATR 240
T+F GPEG FDV+VFDS DY+KLMK+IFDFESIKKLL+ PKFTFCYDALHGVAG YA R
Sbjct: 258 TSFEGPEGKFDVEVFDSADDYVKLMKSIFDFESIKKLLSYPKFTFCYDALHGVAGAYAHR 317
Query: 241 IFVEELGAAESSLLNCVPKEDFGGGHPDPNLTYAKELVDRMGLGKSSNA--EPPEFGAAA 298
IFVEELGA ESSLLNCVPKEDFGGGHPDPNLTYAKELV RMGL K+ +A EPPEFGAAA
Sbjct: 318 IFVEELGAPESSLLNCVPKEDFGGGHPDPNLTYAKELVARMGLSKTDDAGGEPPEFGAAA 377
Query: 299 DGDADRNMILGKRFFVTPSDSVAIIAANAVQSIPYFSSGLKGVARSMPTSAALDVVAKNL 358
DGDADRNMILGKRFFVTPSDSVAIIAANAV +IPYFSSGLKGVARSMPTSAALDVVAKNL
Sbjct: 378 DGDADRNMILGKRFFVTPSDSVAIIAANAVGAIPYFSSGLKGVARSMPTSAALDVVAKNL 437
Query: 359 NLKFFEVPTGWKFFGNLMDAGMCSICGEESFGTGSDHIREKDGIWAVLAWLSILAFKNKD 418
LKFFEVPTGWKFFGNLMDAGMCS+CGEESFGTGSDHIREKDGIWAVLAWLSILA KNK+
Sbjct: 438 GLKFFEVPTGWKFFGNLMDAGMCSVCGEESFGTGSDHIREKDGIWAVLAWLSILAHKNKE 497
Query: 419 NLGGD-KLVTVEDIVRQHWGTYGRHYYTRYDYENVDAGAAKELMANLVSMQSSLSDVNKL 477
L G+ KLVTVEDIVRQHW TYGRHYYTRYDYENVDA AAKELM LV +QSSL +VNK+
Sbjct: 498 TLDGNAKLVTVEDIVRQHWATYGRHYYTRYDYENVDATAAKELMGLLVKLQSSLPEVNKI 557
Query: 478 IKEIRSDVSDVVAADEFEYKDPVDGSVSKHQGVRYLFGDGSRLVFRLSGTGSVGATIRVY 537
IK I +V++V +ADEFEYKDPVDGSVSKHQG+RYLF DGSRLVFRLSGTGS GATIR+Y
Sbjct: 558 IKGIHPEVANVASADEFEYKDPVDGSVSKHQGIRYLFEDGSRLVFRLSGTGSEGATIRLY 617
Query: 538 IEQYEKDSSKTGRDSQDALAPLVDVALKLSKMQEYTGRSAPTVIT 582
IEQYEKD+SK GRDSQDAL PLVDVALKLSKMQE+TGRS+PTVIT
Sbjct: 618 IEQYEKDASKIGRDSQDALGPLVDVALKLSKMQEFTGRSSPTVIT 662
>AT1G23190.1 | chr1:8219946-8224186 FORWARD LENGTH=584
Length = 583
Score = 1008 bits (2606), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 488/583 (83%), Positives = 542/583 (92%), Gaps = 2/583 (0%)
Query: 2 VLFSVTKKATTPFDGQKPGTSGLRKKVTVFQQPHYLQNFVQSTFNALPADKVKGATIVVS 61
++F V+ +T+P DGQKPGTSGLRKKV VF+QP+YL+NFVQ+TFNAL A+KVKGAT+VVS
Sbjct: 1 MVFKVSTVSTSPIDGQKPGTSGLRKKVKVFKQPNYLENFVQATFNALTAEKVKGATLVVS 60
Query: 62 GDGRYFSKDAVQIITKMAAANGVRRVWVGQNSLMSTPAVSAVIRERVGADGSKATGAFIL 121
GDGRY+SKDAVQII KMAAANGVRRVWVG+N+L+STPAVSAVIRER GADGSKATGAFIL
Sbjct: 61 GDGRYYSKDAVQIIIKMAAANGVRRVWVGKNTLLSTPAVSAVIRERSGADGSKATGAFIL 120
Query: 122 TASHNPGGPTEDFGIKYNMENGGPAPESVTDKIFSNTTTITEYLIAEDLPDVDISVVGVT 181
TASHNPGGPTEDFGIKYNMENGGPAPES+TDKI+ NT TI EY IA+DLP+VDIS VGVT
Sbjct: 121 TASHNPGGPTEDFGIKYNMENGGPAPESITDKIYENTKTIKEYPIAQDLPNVDISAVGVT 180
Query: 182 TFSGPEGPFDVDVFDSTIDYIKLMKTIFDFESIKKLLASPKFTFCYDALHGVAGTYATRI 241
+F GPEG FDV+VFD DY+KLMK+IFDFE+I+KLL+SPKFTFCYDALHGVAG YA RI
Sbjct: 181 SFEGPEGKFDVEVFDPADDYVKLMKSIFDFEAIRKLLSSPKFTFCYDALHGVAGAYAHRI 240
Query: 242 FVEELGAAESSLLNCVPKEDFGGGHPDPNLTYAKELVDRMGLGKS-SNAEPPEFGAAADG 300
FVEELGA ES+LLNC PKEDFGGGHPDPNLTYAKELV RMGLGKS + EPPEFGAAADG
Sbjct: 241 FVEELGAQESALLNCTPKEDFGGGHPDPNLTYAKELVARMGLGKSDTGGEPPEFGAAADG 300
Query: 301 DADRNMILGKRFFVTPSDSVAIIAANAVQSIPYFSSGLKGVARSMPTSAALDVVAKNLNL 360
DADRNMILGKRFFVTPSDSVAIIAANA+ +IPYFSSGLKGVARSMPTSAALDVVAK+LNL
Sbjct: 301 DADRNMILGKRFFVTPSDSVAIIAANAIGAIPYFSSGLKGVARSMPTSAALDVVAKSLNL 360
Query: 361 KFFEVPTGWKFFGNLMDAGMCSICGEESFGTGSDHIREKDGIWAVLAWLSILAFKNKDNL 420
KFFEVPTGWKFFGNLMDAGMCS+CGEESFGTGSDHIREKDGIWAVLAW+SILA KNK N+
Sbjct: 361 KFFEVPTGWKFFGNLMDAGMCSVCGEESFGTGSDHIREKDGIWAVLAWMSILAHKNKGNI 420
Query: 421 GGD-KLVTVEDIVRQHWGTYGRHYYTRYDYENVDAGAAKELMANLVSMQSSLSDVNKLIK 479
G+ KLV+VEDIVRQHW TYGRHYYTRYDYENVDAG AKELM +LV +QSS+ +VNK++K
Sbjct: 421 DGNAKLVSVEDIVRQHWATYGRHYYTRYDYENVDAGKAKELMEHLVKLQSSIPEVNKIVK 480
Query: 480 EIRSDVSDVVAADEFEYKDPVDGSVSKHQGVRYLFGDGSRLVFRLSGTGSVGATIRVYIE 539
IRSDV+ V +ADEFEYKDPVDGS+SKHQG+RYLF DGSRLVFRLSGTGS GATIR+YIE
Sbjct: 481 GIRSDVASVASADEFEYKDPVDGSISKHQGIRYLFEDGSRLVFRLSGTGSEGATIRLYIE 540
Query: 540 QYEKDSSKTGRDSQDALAPLVDVALKLSKMQEYTGRSAPTVIT 582
QYEKD+SKTGR+SQ+AL+PLVD+ALKLSKM+E+TGRSAPTVIT
Sbjct: 541 QYEKDASKTGRESQEALSPLVDLALKLSKMEEFTGRSAPTVIT 583
>AT5G51820.1 | chr5:21063531-21067933 REVERSE LENGTH=624
Length = 623
Score = 682 bits (1759), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/578 (58%), Positives = 429/578 (74%), Gaps = 34/578 (5%)
Query: 11 TTPFDGQKPGTSGLRKKVTVFQQPHYLQNFVQSTFNALPADKVKGATIVVSGDGRYFSKD 70
T P +GQK GTSGLRKKV VF + +YL N++Q+ FN+LP + K AT+V+ GDGRYF+K+
Sbjct: 74 TKPIEGQKTGTSGLRKKVKVFMEDNYLANWIQALFNSLPLEDYKNATLVLGGDGRYFNKE 133
Query: 71 AVQIITKMAAANGVRRVWVGQNSLMSTPAVSAVIRERVGADGSKATGAFILTASHNPGGP 130
A QII K+AA NGV ++ VG+ ++STPAVSAVIR+R KA G FI++ASHNPGGP
Sbjct: 134 ASQIIIKIAAGNGVGQILVGKEGILSTPAVSAVIRKR------KANGGFIMSASHNPGGP 187
Query: 131 TEDFGIKYNMENGGPAPESVTDKIFSNTTTITEYLIAEDLPDVDISVVGVTTFSGPEGPF 190
D+GIK+N +G PAPE++TDKI+ NT +I+E +AE +PD+D+S VGVT + G F
Sbjct: 188 EYDWGIKFNYSSGQPAPETITDKIYGNTLSISEIKVAE-IPDIDLSQVGVTKY----GNF 242
Query: 191 DVDVFDSTIDYIKLMKTIFDFESIKKLLASPKFTFCYDALHGVAGTYATRIFVEELGAAE 250
V+V D DY++LM+ +FDF+ I+ LL+ F F +DA+H V G YA IFV+ LGA
Sbjct: 243 SVEVIDPVSDYLELMEDVFDFDLIRGLLSRSDFGFMFDAMHAVTGAYAKPIFVDNLGAKP 302
Query: 251 SSLLNCVPKEDFGGGHPDPNLTYAKELVDRMGLGKSSNAEPPEFGAAADGDADRNMILGK 310
S+ N VP EDFG GHPDPNLTYAK+LVD M P+FGAA+DGD DRNM+LG
Sbjct: 303 DSISNGVPLEDFGHGHPDPNLTYAKDLVDVM-----YRDNGPDFGAASDGDGDRNMVLGN 357
Query: 311 RFFVTPSDSVAIIAANAVQSIPYFSSGLKGVARSMPTSAALDVVAKNLNLKFFEVPTGWK 370
+FFVTPSDSVAIIAANA ++IPYF +G KG+ARSMPTS ALD VA+ L L FFEVPTGWK
Sbjct: 358 KFFVTPSDSVAIIAANAQEAIPYFRAGPKGLARSMPTSGALDRVAEKLKLPFFEVPTGWK 417
Query: 371 FFGNLMDAGMCSICGEESFGTGSDHIREKDGIWAVLAWLSILAFKNKDNLGGDKLVTVED 430
FFGNLMDAG SICGEESFGTGSDHIREKDGIWAVLAWLSILA +NKD GDKLV+V D
Sbjct: 418 FFGNLMDAGKLSICGEESFGTGSDHIREKDGIWAVLAWLSILAHRNKDTKPGDKLVSVAD 477
Query: 431 IVRQHWGTYGRHYYTRYDYENVDAGAAKELMANLVSMQSSLSDVNKLIKEIRSDVSDVVA 490
+V+++W TYGR++++RYDYE ++ A +++ L + S +S DV
Sbjct: 478 VVKEYWATYGRNFFSRYDYEECESEGANKMIEYLREILS------------KSKAGDVYG 525
Query: 491 ------ADEFEYKDPVDGSVSKHQGVRYLFGDGSRLVFRLSGTGSVGATIRVYIEQYEKD 544
AD+F Y DPVDGSV+ QGVR++F DGSR++FRLSGTGS GAT+R+YIEQ+E D
Sbjct: 526 NYVLQFADDFSYTDPVDGSVASKQGVRFVFTDGSRIIFRLSGTGSAGATVRIYIEQFEPD 585
Query: 545 SSKTGRDSQDALAPLVDVALKLSKMQEYTGRSAPTVIT 582
SK D+Q AL PL+D+AL +SK++++TGR PTVIT
Sbjct: 586 VSKHDVDAQIALKPLIDLALSVSKLKDFTGREKPTVIT 623
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.317 0.134 0.389
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 12,856,550
Number of extensions: 573354
Number of successful extensions: 1252
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 1243
Number of HSP's successfully gapped: 3
Length of query: 582
Length of database: 11,106,569
Length adjustment: 104
Effective length of query: 478
Effective length of database: 8,255,305
Effective search space: 3946035790
Effective search space used: 3946035790
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 114 (48.5 bits)