BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0711200 Os03g0711200|AJ429217
(608 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G49340.2 | chr1:18252355-18263967 FORWARD LENGTH=2029 1017 0.0
AT1G51040.1 | chr1:18920658-18923314 FORWARD LENGTH=526 661 0.0
AT5G64070.1 | chr5:25637492-25643902 REVERSE LENGTH=1122 198 5e-51
AT5G09350.1 | chr5:2899365-2905610 REVERSE LENGTH=1117 197 1e-50
AT1G60490.1 | chr1:22285792-22290190 REVERSE LENGTH=815 145 5e-35
>AT1G49340.2 | chr1:18252355-18263967 FORWARD LENGTH=2029
Length = 2028
Score = 1017 bits (2629), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 480/606 (79%), Positives = 535/606 (88%), Gaps = 1/606 (0%)
Query: 3 DQNHPVWGSVDNYTTVREKRKQLLLMLSQNEADRLEVWAQPINTKDAATFRGKISSDKWI 62
DQ HPVWG +DNYT +EKRKQLLLML Q+EADRL+VWAQPI++KD+ R KISS+KW
Sbjct: 1424 DQYHPVWGEMDNYTLGKEKRKQLLLMLCQHEADRLDVWAQPISSKDSPYSRLKISSEKWT 1483
Query: 63 DHARTAFAVDPRIAFSMIMRFPTNSALSSEITQLVQTHILELRTIPEALPFFITPKAVDE 122
++A+TAF+VDPRIA S+ RFP N+++ SE+TQLVQT+I++LRTIPEALP+F+TPK V+E
Sbjct: 1484 EYAKTAFSVDPRIALSVASRFPANASVKSEVTQLVQTNIVDLRTIPEALPYFVTPKNVEE 1543
Query: 123 NSSLLQQLPHWAPCSVTQALEFLTPPYKGHPRVMAYVLRVLETYPPETVTFFMPQLVQSL 182
NS LLQQLPHWA CS+TQALEFLTP YKGHPRVMAYVLRVLE+YPPE VTFFMPQLVQSL
Sbjct: 1544 NSVLLQQLPHWAACSITQALEFLTPAYKGHPRVMAYVLRVLESYPPERVTFFMPQLVQSL 1603
Query: 183 RYDDDKLVEGYLLGAARRSNIFAHILIWHLQGECVPDEPGKEAAAPKATAFHSLLPAVRE 242
RYDD +LVEGYLL A +RS+IFAHILIWHLQGE V + P K+ + K AF +LP VR+
Sbjct: 1604 RYDDGRLVEGYLLRATQRSDIFAHILIWHLQGEDVQETP-KDGSIDKNAAFQEILPQVRQ 1662
Query: 243 KIVDGFTPEARDMXXXXXXXXDKVTSISGVLFPLPKEERRAGIKRELEKITVPGDDLYLP 302
I+DGF+P A DM DKVTSISGVLFPLPKEERRAGI+RELEKI + GDDLYLP
Sbjct: 1663 HIIDGFSPNALDMFTREFDFFDKVTSISGVLFPLPKEERRAGIRRELEKIEMQGDDLYLP 1722
Query: 303 TATNKFVRGIQVDSGIPLQSAAKVPIMITFNVVDRDGDPNDVKPQACIFKVGDDCRQDVL 362
TA NK VRGI+VDSGIPLQSAAKVPIMITFNV+DRDGD +DVKPQACIFKVGDDCRQDVL
Sbjct: 1723 TAPNKLVRGIRVDSGIPLQSAAKVPIMITFNVIDRDGDHSDVKPQACIFKVGDDCRQDVL 1782
Query: 363 ALQVIALLRDIFQAVGLNLYLFPYGVLPTGPERGIIEVVPNTRSRNQMGETTDGGLLEIF 422
ALQVI+LLRDIFQA GLNLYLFPYGVLPTG ERGIIEVVPNTRSR+QMGETTDGGL EIF
Sbjct: 1783 ALQVISLLRDIFQAAGLNLYLFPYGVLPTGAERGIIEVVPNTRSRSQMGETTDGGLYEIF 1842
Query: 423 QQDYGPVGSPSFEAAREMFMISSAGYAVASLLLQPKDRHNGNLLFDSHGRLVHIDFGFIL 482
QQDYGPVGS +FE ARE F+ISSAGYAVASLLLQPKDRHNGNLLFD GRLVHIDFGFIL
Sbjct: 1843 QQDYGPVGSTTFETARENFLISSAGYAVASLLLQPKDRHNGNLLFDDVGRLVHIDFGFIL 1902
Query: 483 EISPGGNMGFESAHFKLSHEMTQLLDPSGTMKSDTWNQFLRLCVKGYLAGRRHMNGIITT 542
E SPGGNM FESAHFKLSHEMTQLLDPSG MKS TW+QF+ LCVKGYLA RR M+GII+T
Sbjct: 1903 ETSPGGNMRFESAHFKLSHEMTQLLDPSGVMKSKTWHQFVSLCVKGYLAARRQMDGIIST 1962
Query: 543 VNLMVDSGLPCFSRGEPIANLRKRFHPEMNEREAANFMVRTCVDAYNKWTTAGYDLIQYL 602
V +M++SGLPCFSRG+PI NLRKRFHPEM+EREAA+FM+ C DAYNKWTTAGYDLIQYL
Sbjct: 1963 VQMMLESGLPCFSRGDPIGNLRKRFHPEMSEREAAHFMIHVCTDAYNKWTTAGYDLIQYL 2022
Query: 603 QQGIEK 608
QQGIEK
Sbjct: 2023 QQGIEK 2028
>AT1G51040.1 | chr1:18920658-18923314 FORWARD LENGTH=526
Length = 525
Score = 661 bits (1705), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/526 (64%), Positives = 390/526 (74%), Gaps = 31/526 (5%)
Query: 84 PTNSALSSEITQLVQTHILELRTIPEALPFFITPKAVDENSSLLQQLPHWAPCSVTQALE 143
P + L +E + Q+H+ + + L + DEN+ + L+
Sbjct: 30 PQSKLLRAESPRFSQSHLNAILAVTRILSKIV--DTTDENAKFV-------------VLD 74
Query: 144 FL-TPPYKGHPRVMAYVLRVLETYPPETVTFFMPQLVQSLRYDDDKLVEGYLLGAARRSN 202
FL T P H Y L + E+++ F + + +VEGYLL AA+RS+
Sbjct: 75 FLQTVPKSFHRSFWPYSLSL------ESISAFYCSFLGYVSCLSQLMVEGYLLRAAQRSD 128
Query: 203 IFAHILIWHLQGECVPDEPGKEAAAPKATAFHSLLPAVREKIVDGFTPEARDMXXXXXXX 262
IFAH LIWHLQGE V +E K+ A K +F +L VR+ IVDGFTP+A +
Sbjct: 129 IFAHTLIWHLQGESV-EEIVKDGAFDKNASFQEILSDVRQHIVDGFTPKALNFFSREFDF 187
Query: 263 XDKVTSISGVLFPLPKEERRAGIKRELEKITVPGDDLYLPTATNKFVRGIQVDSGIPLQS 322
+KVTSISG L PLPKEER AGI+RELEKI + G+DLYLPTA NK VR IQVDSGIPLQS
Sbjct: 188 FEKVTSISGALLPLPKEERVAGIRRELEKIKMQGEDLYLPTAPNKLVRVIQVDSGIPLQS 247
Query: 323 AAKVPIMITFNVVDRDGDPNDVKPQACIFKVGDDCRQDVLALQVIALLRDIFQAVGLNLY 382
AAKVPIMITFNVVD DGD NDVKPQACIFKVGDDCRQDVLALQVI+LL DIFQAVGLNLY
Sbjct: 248 AAKVPIMITFNVVDLDGDHNDVKPQACIFKVGDDCRQDVLALQVISLLGDIFQAVGLNLY 307
Query: 383 LFPYGVLPTGPERGIIEVVPNTRSRNQMGETTDGGLLEIFQQDYGPVGSPSFEAAREMFM 442
LFPYGVLPT VVPNTRSR+QMGETTDGGL EIFQQ+YG VGS +FE AR F+
Sbjct: 308 LFPYGVLPT--------VVPNTRSRSQMGETTDGGLYEIFQQNYGLVGSTTFETARANFL 359
Query: 443 ISSAGYAVASLLLQPKDRHNGNLLFDSHGRLVHIDFGFILEISPGGNMGFESAHFKLSHE 502
ISSAGYAVASLLLQPKDRHNGNLLFD GRLVHIDFGFILE SPGGNM FE+AHFKLSHE
Sbjct: 360 ISSAGYAVASLLLQPKDRHNGNLLFDDVGRLVHIDFGFILETSPGGNMRFENAHFKLSHE 419
Query: 503 MTQLLDPSGTMKSDTWNQFLRLCVKGYLAGRRHMNGIITTVNLMVDSGLPCFSRGEPIAN 562
MTQLLDPSG MKS TW+QF+ LCVKGYLA RR+M+ II+TV +M++SGLPCFSRG+PI N
Sbjct: 420 MTQLLDPSGVMKSKTWHQFVSLCVKGYLAARRYMDEIISTVQMMLESGLPCFSRGDPIGN 479
Query: 563 LRKRFHPEMNEREAANFMVRTCVDAYNKWTTAGYDLIQYLQQGIEK 608
LRKRFHPEM+EREAA FM+ C DAYNKWTTAGYDLIQYLQQG+EK
Sbjct: 480 LRKRFHPEMSEREAALFMINVCTDAYNKWTTAGYDLIQYLQQGVEK 525
>AT5G64070.1 | chr5:25637492-25643902 REVERSE LENGTH=1122
Length = 1121
Score = 198 bits (504), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 111/264 (42%), Positives = 156/264 (59%), Gaps = 6/264 (2%)
Query: 347 QACIFKVGDDCRQDVLALQVIALLRDIFQAVGLNLYLFPYGVLPTGPERGIIEVVPNTRS 406
++ I K GDDCRQ+ LA+Q+I+ DIFQ GL L+L PY VL T +IE +P+T S
Sbjct: 859 RSIIVKSGDDCRQEHLAVQLISHFYDIFQEAGLPLWLRPYEVLVTSSYTALIETIPDTAS 918
Query: 407 RNQMGETTDG--GLLEIFQQDYGPVGSPSFEAAREMFMISSAGYAVASLLLQPKDRHNGN 464
+ + L + F Y SPSF+ A+ F+ S AGY++ LLQ KDRHNGN
Sbjct: 919 IHSIKSRYPNITSLRDFFVAKYKE-NSPSFKLAQRNFVESMAGYSLVCYLLQVKDRHNGN 977
Query: 465 LLFDSHGRLVHIDFGFILEISPGGNMGFESAHFKLSHEMTQLLDPSGT-MKSDTWNQFLR 523
LL D G ++HIDFGF+L SPGG + FESA FKL+ E+ +++D + S+ ++ F
Sbjct: 978 LLLDEEGHIIHIDFGFMLSNSPGG-VNFESAPFKLTRELLEVMDSDADGVPSEFFDYFKV 1036
Query: 524 LCVKGYLAGRRHMNGIITTVNLMVDSGLPCFSRG-EPIANLRKRFHPEMNEREAANFMVR 582
LC++G+L R+H II V ++ DSG PCF G I NLRKRFH + E + + ++
Sbjct: 1037 LCIQGFLTCRKHAERIILLVEMLQDSGFPCFKGGPRTIQNLRKRFHLSLTEEQCVSLVLS 1096
Query: 583 TCVDAYNKWTTAGYDLIQYLQQGI 606
+ + W T YD Q + GI
Sbjct: 1097 LISSSLDAWRTRQYDYYQRVLNGI 1120
>AT5G09350.1 | chr5:2899365-2905610 REVERSE LENGTH=1117
Length = 1116
Score = 197 bits (502), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 110/264 (41%), Positives = 156/264 (59%), Gaps = 6/264 (2%)
Query: 347 QACIFKVGDDCRQDVLALQVIALLRDIFQAVGLNLYLFPYGVLPTGPERGIIEVVPNTRS 406
++ I K GDDCRQ+ LA+Q+I+ DIFQ GL L+L PY VL T +IE +P+T S
Sbjct: 854 RSIIVKSGDDCRQEHLAVQLISHFFDIFQEAGLPLWLRPYEVLVTSSYTALIETIPDTAS 913
Query: 407 RNQMGETTDG--GLLEIFQQDYGPVGSPSFEAAREMFMISSAGYAVASLLLQPKDRHNGN 464
+ + L + F + SPSF+ A+ F+ S AGY++ LLQ KDRHNGN
Sbjct: 914 IHSIKSRYPNITSLRDFFDAKFKE-NSPSFKLAQRNFVESMAGYSLVCYLLQIKDRHNGN 972
Query: 465 LLFDSHGRLVHIDFGFILEISPGGNMGFESAHFKLSHEMTQLLDPSGT-MKSDTWNQFLR 523
LL D G ++HIDFGF+L SPGG + FESA FKL+ E+ +++D + S+ ++ F
Sbjct: 973 LLMDEEGHIIHIDFGFMLSNSPGG-VNFESAPFKLTRELLEVMDSDAEGLPSEFFDYFKV 1031
Query: 524 LCVKGYLAGRRHMNGIITTVNLMVDSGLPCFSRG-EPIANLRKRFHPEMNEREAANFMVR 582
LC++G+L R+H II V ++ DSG PCF G I NLRKRFH + E + + ++
Sbjct: 1032 LCIQGFLTCRKHAERIILLVEMLQDSGFPCFKGGPRTIQNLRKRFHLSLTEEQCVSLVLS 1091
Query: 583 TCVDAYNKWTTAGYDLIQYLQQGI 606
+ + W T YD Q + GI
Sbjct: 1092 LISSSLDAWRTRQYDYYQRVLNGI 1115
>AT1G60490.1 | chr1:22285792-22290190 REVERSE LENGTH=815
Length = 814
Score = 145 bits (367), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 139/529 (26%), Positives = 230/529 (43%), Gaps = 47/529 (8%)
Query: 74 RIAFSMIMRFPTNSALSSEITQLVQTHILELRTIPEALPFFITP---KAVDENSSLLQQL 130
R + ++++P LS + QL+ L + AL F+ V E +Q +
Sbjct: 284 RKSIQRVLKYPPTRTLSGDERQLLWKFRFSLMSEKRALTKFLRCVEWSDVQEAKQAIQLM 343
Query: 131 PHWAPCSVTQALEFLTPPYKGHPRVMAYVLRVLETYPPETVTFFMPQLVQSLRYD--DDK 188
W V ALE L+P ++ V AY + VLE E + ++ QLVQ+LR++ D
Sbjct: 344 YKWEMIDVCDALELLSPLFESE-EVRAYAVSVLERADDEELQCYLLQLVQALRFERSDRS 402
Query: 189 LVEGYLLGAARRSNIFAHILIWHLQGECVPDEPGKEAAAPKATAFHSLLPAVREKIVDGF 248
+ +L+ A ++ A L W+ V E A + + + LL K+ G
Sbjct: 403 CLSQFLVQRALQNIELASFLRWY-----VAVELHDHVYAKRFYSTYELLEENIIKLPPGV 457
Query: 249 TPEARDMXXXXXXXXDKVTSISGVLFPLPKEER--RAGIKRELEKI-----------TVP 295
E + T ++ L + +E R R ++++EK+ T
Sbjct: 458 NGED---GYQLWQSLVRQTELTAQLCSITREVRNVRGNTQKKIEKLRQLLGGLLSELTYF 514
Query: 296 GDDLYLPTATNKFVRGIQVDSGIPLQSAAKVPIMITFNVVDRDGDPNDVKPQACIFKVGD 355
+ + P N ++GI +SA P+ +TF + G IFK GD
Sbjct: 515 EEPIRSPLTPNVLIKGIVAGESSLFKSALH-PLRLTFRTPEEGGSCK------LIFKKGD 567
Query: 356 DCRQDVLALQVIALLRDIFQAVGLNLYLFPYGVLPTGPERGIIEVVPNTRSRNQMGE-TT 414
D RQD L +Q++ L+ + + L+L L PY VL TG + G++E +P+ + E +
Sbjct: 568 DLRQDQLVVQMVWLMDRLLKLENLDLCLTPYKVLATGHDEGMLEFIPSRSLAQILSEHRS 627
Query: 415 DGGLLEIFQQD-YGPVGSPSFEAAREMFMISSAGYAVASLLLQPKDRHNGNLLFDSHGRL 473
L+ F D + P G + + F+ S AGY+V + +L DRH NLL GRL
Sbjct: 628 ITSYLQKFHPDEHAPFGITA--TCLDTFIKSCAGYSVITYILGIGDRHLDNLLLTDDGRL 685
Query: 474 VHIDFGFILEISPGGNMGFESAHFKLSHEMTQLLDPSGTMKSDTWNQFLRLCVKGYLAGR 533
H+DF FIL P KL EM + + G +S + +F C + Y R
Sbjct: 686 FHVDFAFILGRDPKPF----PPPMKLCKEMVEAM---GGAESQYYTRFKSYCCEAYNILR 738
Query: 534 RHMNGIITTVNLMVDSGLPCFSRG--EPIANLRKRFHPEMNEREAANFM 580
+ N I+ +LM S +P + + I L+++F +M++ +F
Sbjct: 739 KSSNLILNLFHLMAGSTIPDIASDPEKGILKLQEKFRLDMDDEACIHFF 787
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.321 0.138 0.415
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 13,299,928
Number of extensions: 559719
Number of successful extensions: 1068
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 1054
Number of HSP's successfully gapped: 5
Length of query: 608
Length of database: 11,106,569
Length adjustment: 104
Effective length of query: 504
Effective length of database: 8,255,305
Effective search space: 4160673720
Effective search space used: 4160673720
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 115 (48.9 bits)