BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0706900 Os03g0706900|AK065293
(473 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G73950.1 | chr1:27800126-27804476 REVERSE LENGTH=467 640 0.0
AT1G18470.1 | chr1:6356407-6360057 REVERSE LENGTH=468 626 e-180
AT1G68820.1 | chr1:25865852-25868800 FORWARD LENGTH=469 597 e-171
AT4G39050.1 | chr4:18193462-18200148 FORWARD LENGTH=1056 62 5e-10
AT2G21380.1 | chr2:9141833-9148883 FORWARD LENGTH=1059 61 2e-09
AT2G35330.1 | chr2:14869179-14871673 FORWARD LENGTH=739 52 7e-07
AT3G12920.1 | chr3:4122127-4123323 REVERSE LENGTH=336 50 2e-06
AT1G45976.1 | chr1:17199371-17200680 FORWARD LENGTH=326 50 2e-06
AT1G79110.1 | chr1:29759345-29760586 FORWARD LENGTH=359 49 6e-06
>AT1G73950.1 | chr1:27800126-27804476 REVERSE LENGTH=467
Length = 466
Score = 640 bits (1651), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 298/439 (67%), Positives = 351/439 (79%), Gaps = 1/439 (0%)
Query: 35 KVDGRTAYSWWIIFIPLWLFHGIVARGRFSMPAPSLPHGRHWAPCHSIVAAPLLIAFELL 94
K+D YSWW++ +PLW FH +VARGRFS+PAP P RHWAPCH+IV+ PLLIAFELL
Sbjct: 29 KLDHSITYSWWVVCLPLWAFHAVVARGRFSLPAPIAPRNRHWAPCHAIVSTPLLIAFELL 88
Query: 95 LCIYLESLRVKSKPTVDLKIVFLPLLAFEVIILADNFRMCRALMPGDEESMSDEAIWETL 154
LC+YLE+ S P V LKIVFLPLLAFEVIIL DN RMCRALMPGDEES++DEA+WE L
Sbjct: 89 LCVYLETAYADSPPAVSLKIVFLPLLAFEVIILVDNARMCRALMPGDEESVNDEAVWEAL 148
Query: 155 PHFWVAISMVFLIAATTFTLLKLSGDVGALGWWDLFINYGIAECFAFLVCTRWFNPMIHK 214
PHFWVAISMVF +AAT FTLLKLSGDV ALGWWDLFIN+GIAECFAFLVCT+W NP+IH+
Sbjct: 149 PHFWVAISMVFFLAATVFTLLKLSGDVAALGWWDLFINFGIAECFAFLVCTKWSNPVIHR 208
Query: 215 SPNPGEASSSSAAIRYRDWESGLLLPSLEDHEQERLCGLPDIGGHVMKIPLVIFQVLLCM 274
S E SSS IRY DW SGL + S +D Q+ CGL DIGGH+MKIPL++FQV+LCM
Sbjct: 209 SSRDRETGSSSTNIRYLDWNSGLGVFSEDDRNQDT-CGLQDIGGHIMKIPLIVFQVVLCM 267
Query: 275 RLEGTPPSAQYIPIFALFSPLFILQGAGVLFSXXXXXXXXXXXXXNGPVSPNYLTISSKV 334
LEGTP +A+ I + LFSPLF+LQG GVLF+ + Y S+
Sbjct: 268 HLEGTPEAAKSISVPVLFSPLFLLQGVGVLFAASKLIEKVVLLLRGEDDTGLYFRFLSRA 327
Query: 335 RDCFAFLHRGSRLLGWWSIDEGSKEEQARLFYTESTGYNTFCGYPPEVVRKMPKRDLAEE 394
DC FLH GSRLLGWWSIDEGS+EE+ARL++ + +GYNTFCG+PPE+V+KMPK++LAEE
Sbjct: 328 HDCLGFLHHGSRLLGWWSIDEGSREEEARLYFDQESGYNTFCGHPPEIVKKMPKKELAEE 387
Query: 395 VWRLQAALGEQSEITKCTKQEFERLQNEKVLCRICYEGEICMVLLPCRHRTLCKTCSDKC 454
VWRLQAALGEQ+EITK ++QE+ERLQNEKVLCR+C+E EI +VLLPCRHR LC+ CSDKC
Sbjct: 388 VWRLQAALGEQTEITKFSQQEYERLQNEKVLCRVCFEREISVVLLPCRHRVLCRNCSDKC 447
Query: 455 KKCPICRVPIEERMPVYDV 473
KKCP CR+ IEER+PVYDV
Sbjct: 448 KKCPFCRITIEERLPVYDV 466
>AT1G18470.1 | chr1:6356407-6360057 REVERSE LENGTH=468
Length = 467
Score = 626 bits (1615), Expect = e-180, Method: Compositional matrix adjust.
Identities = 293/440 (66%), Positives = 348/440 (79%), Gaps = 2/440 (0%)
Query: 35 KVDGRTAYSWWIIFIPLWLFHGIVARGRFSMPAPSLPHGRHWAPCHSIVAAPLLIAFELL 94
K+D + SWW++F PLW FH +VARGRFS+PAP P RHWAPCH++VA PLL+AFELL
Sbjct: 29 KLDHTVSSSWWMVFFPLWAFHAVVARGRFSLPAPVAPRNRHWAPCHAVVATPLLVAFELL 88
Query: 95 LCIYLESLRVKSKPTVDLKIVFLPLLAFEVIILADNFRMCRALMPGDEESMSDEAIWETL 154
LCIYLES + P V LKI FLPLLAFE+ IL DN RMCRALMPGD++S++D+AIWE L
Sbjct: 89 LCIYLESSYARWPPAVSLKIAFLPLLAFELTILVDNLRMCRALMPGDDDSITDDAIWEAL 148
Query: 155 PHFWVAISMVFLIAATTFTLLKLSGDVGALGWWDLFINYGIAECFAFLVCTRWFNPMIHK 214
PHFWVAISMVF +AAT FTLLKLSGDV ALGWWDLFIN+GIAECFAFLVCT+W NP+IH+
Sbjct: 149 PHFWVAISMVFTLAATFFTLLKLSGDVVALGWWDLFINFGIAECFAFLVCTKWSNPVIHR 208
Query: 215 SPNPGEASSSSAAIRYRDWESGLLLPSLEDHEQERLCGLPDIGGHVMKIPLVIFQVLLCM 274
S E SSS +IRY DW SGL++ ED Q+R CGL DIGGH++KIP+++FQV+LCM
Sbjct: 209 SSRARETGSSSTSIRYLDWNSGLVVAPEEDRHQDRWCGLQDIGGHMLKIPVILFQVVLCM 268
Query: 275 RLEGTPPSAQYIPIFALFSPLFILQGAGVLFSXXXXXXXXXXXXXNGPVSPN-YLTISSK 333
LEGTP A+ I I LFSPLF+LQG GVLF+ G P Y SS
Sbjct: 269 YLEGTPERAKDISIPVLFSPLFLLQGLGVLFA-ASKLLEKIVLLLRGEAGPGLYFRFSSS 327
Query: 334 VRDCFAFLHRGSRLLGWWSIDEGSKEEQARLFYTESTGYNTFCGYPPEVVRKMPKRDLAE 393
DC FLH GSRLLGWWSIDEGS+EEQARL++ + +GYNTF G+PPE+V+KMPK DLAE
Sbjct: 328 AHDCLGFLHHGSRLLGWWSIDEGSREEQARLYFDQESGYNTFSGHPPEIVKKMPKEDLAE 387
Query: 394 EVWRLQAALGEQSEITKCTKQEFERLQNEKVLCRICYEGEICMVLLPCRHRTLCKTCSDK 453
EVWRLQAALGEQ+EITK ++QE+ERLQNEKVLCR+C+E +I +VLLPCRHR LC+TC+DK
Sbjct: 388 EVWRLQAALGEQTEITKFSQQEYERLQNEKVLCRVCFEKDISLVLLPCRHRVLCRTCADK 447
Query: 454 CKKCPICRVPIEERMPVYDV 473
C CPICR+ IE+R+ VYDV
Sbjct: 448 CTTCPICRIDIEKRLSVYDV 467
>AT1G68820.1 | chr1:25865852-25868800 FORWARD LENGTH=469
Length = 468
Score = 597 bits (1539), Expect = e-171, Method: Compositional matrix adjust.
Identities = 297/473 (62%), Positives = 352/473 (74%), Gaps = 10/473 (2%)
Query: 3 RRRAQTWAGVGKTXXXXXXXXXXXXXXXXXXXKVDGRTAYSWWIIFIPLWLFHGIVARGR 62
+RR +W V K+ K+D ++SWW +F PLWLFH ++ARGR
Sbjct: 4 QRRVMSWRRVWKSFQAASAHCLLFSFTLLLALKLDHVVSHSWWFVFAPLWLFHAVIARGR 63
Query: 63 FSMPAPSLPHGRHWAPCHSIVAAPLLIAFELLLCIYLESLRVKSKPTVDLKIVFLPLLAF 122
FS+PAPS+PH RHWAP HS++A PLL+AFE+LLC++LE K VDLKIVFLPLLAF
Sbjct: 64 FSLPAPSMPHDRHWAPFHSVMATPLLVAFEILLCVHLED-----KYVVDLKIVFLPLLAF 118
Query: 123 EVIILADNFRMCRALMPGDEESMSDEAIWETLPHFWVAISMVFLIAATTFTLLKLSGDVG 182
EV IL DN RMCR LMPGDEE+MSDEAIWETLPHFWV+ISMVF IAATTFTLLKL GDV
Sbjct: 119 EVAILIDNVRMCRTLMPGDEETMSDEAIWETLPHFWVSISMVFFIAATTFTLLKLCGDVA 178
Query: 183 ALGWWDLFINYGIAECFAFLVCTRWFNPMIHKSPNPGEASSSSAAIRYRDWESGLLLPSL 242
ALGWWDLFIN+GIAECFAFLVCT+W N IH+ + E SSSS +RY DW GL++ +
Sbjct: 179 ALGWWDLFINFGIAECFAFLVCTKWSNQSIHRYSHIPEPSSSSMVVRYLDWNRGLVVTAD 238
Query: 243 EDHEQ-ERLCGLPDIGGHVMKIPLVIFQVLLCMRLEGTPPSAQYIPIFALFSPLFILQGA 301
++H+Q R+CGL DIGGHVMKIP V FQ++L MRLEGTP SA+ IPI LF PLF+LQGA
Sbjct: 239 DEHQQSNRICGLQDIGGHVMKIPFVTFQIILFMRLEGTPASAKNIPILVLFVPLFLLQGA 298
Query: 302 GVLFSXXXXXXXXXXXXXNGPVS-PNYLTISSKVRDCFAFLHRGSRLLGWWSIDEGSKEE 360
GVLF+ +G S Y T +S R+ F G+RLLGWWSIDEGS+EE
Sbjct: 299 GVLFAMYRLVEKSVLLINSGSGSYGRYFTATSSAREFLGFFQHGARLLGWWSIDEGSREE 358
Query: 361 QARLFYTESTGYNTFCGYPPEVVRKMPKRDLAEEVWRLQAALGEQSEITKCTKQEFERLQ 420
QARL+ E+TGYNTF PEVV+KMPK DL EE+WRLQAAL EQ++IT ++QE+ERLQ
Sbjct: 359 QARLYSGEATGYNTF---SPEVVKKMPKSDLVEEIWRLQAALSEQTDITSYSQQEYERLQ 415
Query: 421 NEKVLCRICYEGEICMVLLPCRHRTLCKTCSDKCKKCPICRVPIEERMPVYDV 473
NEK+LCR+C+E I +VLLPCRH LC TC +KCKKCPICRV IEERMPVYDV
Sbjct: 416 NEKILCRVCFEDPINVVLLPCRHHVLCSTCCEKCKKCPICRVLIEERMPVYDV 468
>AT4G39050.1 | chr4:18193462-18200148 FORWARD LENGTH=1056
Length = 1055
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 50/92 (54%), Gaps = 6/92 (6%)
Query: 380 PEVVRKMPKRDLAEE---VWRLQAALGEQSEITKCTKQEFERLQNEKVLCRICYEGEICM 436
PEVV + +E V RL+A + E E K K + N + C++C+E
Sbjct: 962 PEVVVVAKTEETPKEEPLVARLKARMQEMKE--KEMKSQANGDANSHI-CKVCFESPTAA 1018
Query: 437 VLLPCRHRTLCKTCSDKCKKCPICRVPIEERM 468
+LLPCRH LCK+CS C +CPICR I +R+
Sbjct: 1019 ILLPCRHFCLCKSCSLACSECPICRTKISDRL 1050
>AT2G21380.1 | chr2:9141833-9148883 FORWARD LENGTH=1059
Length = 1058
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 31/44 (70%)
Query: 425 LCRICYEGEICMVLLPCRHRTLCKTCSDKCKKCPICRVPIEERM 468
+C++C+E +LLPCRH LCK+CS C +CPICR I +R+
Sbjct: 1010 ICKVCFESPTATILLPCRHFCLCKSCSLACSECPICRTKISDRL 1053
>AT2G35330.1 | chr2:14869179-14871673 FORWARD LENGTH=739
Length = 738
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Query: 416 FERLQNEKVLCRICYEGEICMVLLPCRHRTLCKTCSDK-----CKKCPICRVPIEERMPV 470
+E+ N C IC + E+ +V LPC H+ +C +CSD CP CR P+++R+ V
Sbjct: 674 YEKEANYDRECLICMKDEVSVVFLPCAHQVVCASCSDSFMGSGKATCPCCRAPVQQRIRV 733
Query: 471 Y 471
+
Sbjct: 734 F 734
>AT3G12920.1 | chr3:4122127-4123323 REVERSE LENGTH=336
Length = 335
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 35/74 (47%), Gaps = 10/74 (13%)
Query: 390 DLAEEVWRLQAALGEQSEITKCTKQEFERLQNEKVLCRICYEGEICMVLLPCRHRTLCKT 449
D EE W+L GE + K + +CR C +GE ++LLPCRH LC
Sbjct: 261 DSEEERWKL---AGEAQDTKKMCRVGMS-------MCRSCGKGEASVLLLPCRHMCLCSV 310
Query: 450 CSDKCKKCPICRVP 463
C CPIC+ P
Sbjct: 311 CGSSLNTCPICKSP 324
>AT1G45976.1 | chr1:17199371-17200680 FORWARD LENGTH=326
Length = 325
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 28/48 (58%)
Query: 424 VLCRICYEGEICMVLLPCRHRTLCKTCSDKCKKCPICRVPIEERMPVY 471
++CR C E+CM+LLPC H LCK C K CP+C+ M VY
Sbjct: 277 MMCRFCGVREMCMLLLPCNHMCLCKECERKLSSCPLCQSSKFLGMEVY 324
>AT1G79110.1 | chr1:29759345-29760586 FORWARD LENGTH=359
Length = 358
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 23/39 (58%)
Query: 425 LCRICYEGEICMVLLPCRHRTLCKTCSDKCKKCPICRVP 463
+CR C E E C++LLPCRH LC C CPIC P
Sbjct: 309 MCRNCGEEESCVLLLPCRHLCLCGVCGSSVHTCPICTSP 347
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.326 0.141 0.467
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 10,542,828
Number of extensions: 448304
Number of successful extensions: 1294
Number of sequences better than 1.0e-05: 9
Number of HSP's gapped: 1301
Number of HSP's successfully gapped: 9
Length of query: 473
Length of database: 11,106,569
Length adjustment: 102
Effective length of query: 371
Effective length of database: 8,310,137
Effective search space: 3083060827
Effective search space used: 3083060827
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 113 (48.1 bits)