BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0697200 Os03g0697200|Os03g0697200
(230 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G06300.1 | chr5:1922042-1925278 REVERSE LENGTH=218 228 1e-60
AT3G53450.1 | chr3:19812977-19815430 REVERSE LENGTH=216 227 3e-60
AT2G28305.1 | chr2:12081186-12084307 FORWARD LENGTH=214 224 2e-59
AT5G11950.1 | chr5:3855072-3856815 FORWARD LENGTH=217 222 1e-58
AT2G37210.2 | chr2:15624253-15626834 REVERSE LENGTH=240 217 5e-57
AT4G35190.1 | chr4:16746724-16748090 FORWARD LENGTH=229 215 2e-56
AT2G35990.1 | chr2:15114070-15116647 FORWARD LENGTH=214 214 3e-56
AT5G03270.1 | chr5:781870-783997 FORWARD LENGTH=230 180 7e-46
AT5G26140.1 | chr5:9130796-9131636 FORWARD LENGTH=144 140 5e-34
>AT5G06300.1 | chr5:1922042-1925278 REVERSE LENGTH=218
Length = 217
Score = 228 bits (582), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 128/175 (73%)
Query: 21 RTICVFCGSRRGNRPSFSAAALDLGKQLVEREXXXXXXXXXXXXXXXVSKTVHDGGRHVL 80
+ ICVFCGS G +PS+ AA+ LG +LVER VS+ VH GGRHVL
Sbjct: 9 KRICVFCGSSSGKKPSYQEAAIQLGNELVERRIDLVYGGGSVGLMGLVSQAVHHGGRHVL 68
Query: 81 GVIPSALLPEEVSGETLGEAKVVRDMHERKSEMAKHADAFIALPGGYGTIEELLEIIAWA 140
GVIP L+P E++GET+GE K V DMH+RK+EMA+ ADAFIALPGGYGT+EELLE+I WA
Sbjct: 69 GVIPKTLMPREITGETIGEVKAVADMHQRKAEMARQADAFIALPGGYGTLEELLEVITWA 128
Query: 141 QLGIHNKPVGLLNVDGYYNNLLSLFDKGVEEGFIDAAARNIFVLADNAGELLTKL 195
QLGIH KPVGLLNVDGYYN+LL+ DK V+EGFI AR I V A NA EL+ +L
Sbjct: 129 QLGIHRKPVGLLNVDGYYNSLLTFIDKAVDEGFISPMARRIIVSAPNAKELVRQL 183
>AT3G53450.1 | chr3:19812977-19815430 REVERSE LENGTH=216
Length = 215
Score = 227 bits (579), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 112/195 (57%), Positives = 139/195 (71%), Gaps = 7/195 (3%)
Query: 1 MDANHDKVVESGSRGGRGPVRTICVFCGSRRGNRPSFSAAALDLGKQLVEREXXXXXXXX 60
M+ N++ + S+ GR ICVFCGS +G + S+ AA+DLG +LV R
Sbjct: 1 MEVNNETM--QKSKFGR-----ICVFCGSSQGKKSSYQDAAVDLGNELVLRNIDLVYGGG 53
Query: 61 XXXXXXXVSKTVHDGGRHVLGVIPSALLPEEVSGETLGEAKVVRDMHERKSEMAKHADAF 120
VS+ VHDGGRHV+GVIP L+P E++GET+GE + V DMH+RK+EMA+H+DAF
Sbjct: 54 SIGLMGLVSQAVHDGGRHVIGVIPKTLMPRELTGETVGEVRAVADMHQRKAEMARHSDAF 113
Query: 121 IALPGGYGTIEELLEIIAWAQLGIHNKPVGLLNVDGYYNNLLSLFDKGVEEGFIDAAARN 180
IALPGGYGT+EELLE+I WAQLGIH+KPVGLLNVDGYYN+LLS DK VEEGFI AR
Sbjct: 114 IALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVEEGFISTNARQ 173
Query: 181 IFVLADNAGELLTKL 195
I + A A EL+ KL
Sbjct: 174 IIISAPTAKELVKKL 188
>AT2G28305.1 | chr2:12081186-12084307 FORWARD LENGTH=214
Length = 213
Score = 224 bits (572), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 106/175 (60%), Positives = 131/175 (74%)
Query: 21 RTICVFCGSRRGNRPSFSAAALDLGKQLVEREXXXXXXXXXXXXXXXVSKTVHDGGRHVL 80
+ ICVFCGS GN+ S+ AA++LG +LV R +S+ V +GGRHV+
Sbjct: 8 KRICVFCGSSAGNKVSYKDAAIELGTELVSRNIDLVYGGGSIGLMGLISQAVFNGGRHVI 67
Query: 81 GVIPSALLPEEVSGETLGEAKVVRDMHERKSEMAKHADAFIALPGGYGTIEELLEIIAWA 140
GVIP L+P E++GET+GE K V DMH+RK+EMAKH+DAFIALPGGYGT+EELLE+I WA
Sbjct: 68 GVIPKTLMPREITGETVGEVKAVADMHQRKAEMAKHSDAFIALPGGYGTLEELLEVITWA 127
Query: 141 QLGIHNKPVGLLNVDGYYNNLLSLFDKGVEEGFIDAAARNIFVLADNAGELLTKL 195
QLGIH+KPVGLLNV+GYYN+LLS DK VEEGFI AR+I V A +A EL+ KL
Sbjct: 128 QLGIHDKPVGLLNVEGYYNSLLSFIDKAVEEGFISPTARHIIVSAPSAKELVKKL 182
>AT5G11950.1 | chr5:3855072-3856815 FORWARD LENGTH=217
Length = 216
Score = 222 bits (566), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 108/179 (60%), Positives = 133/179 (74%)
Query: 17 RGPVRTICVFCGSRRGNRPSFSAAALDLGKQLVEREXXXXXXXXXXXXXXXVSKTVHDGG 76
R R ICVFCGS G+R FS AA++LG +LV+R+ +S+ V++GG
Sbjct: 6 RSRFRKICVFCGSHSGHREVFSDAAIELGNELVKRKIDLVYGGGSVGLMGLISRRVYEGG 65
Query: 77 RHVLGVIPSALLPEEVSGETLGEAKVVRDMHERKSEMAKHADAFIALPGGYGTIEELLEI 136
HVLG+IP AL+P E+SGET+G+ +VV DMHERK+ MA+ A+AFIALPGGYGT+EELLE+
Sbjct: 66 LHVLGIIPKALMPIEISGETVGDVRVVADMHERKAAMAQEAEAFIALPGGYGTMEELLEM 125
Query: 137 IAWAQLGIHNKPVGLLNVDGYYNNLLSLFDKGVEEGFIDAAARNIFVLADNAGELLTKL 195
I W+QLGIH K VGLLNVDGYYNNLL+LFD GVEEGFI ARNI V A A EL+ K+
Sbjct: 126 ITWSQLGIHKKTVGLLNVDGYYNNLLALFDTGVEEGFIKPGARNIVVSAPTAKELMEKM 184
>AT2G37210.2 | chr2:15624253-15626834 REVERSE LENGTH=240
Length = 239
Score = 217 bits (552), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 109/208 (52%), Positives = 131/208 (62%), Gaps = 24/208 (11%)
Query: 12 GSRGGRGPVRTICVFCGSRRGNRPSFSAAALDLGKQLVEREXXXXXXXXXXXXXXXVSKT 71
G + R ICVFCGS +G + S+ AA+DLG +LV R VS+
Sbjct: 5 GESMQKSKFRRICVFCGSSQGKKSSYQDAAVDLGNELVSRNIDLVYGGGSIGLMGLVSQA 64
Query: 72 VHDGGRHVLGVIPSALLPEEVSGETLGEAKVVRDMHERKSEMAKHADAFIALP------- 124
VHDGGRHV+G+IP L+P E++GET+GE + V DMH+RK+EMAKH+DAFIALP
Sbjct: 65 VHDGGRHVIGIIPKTLMPRELTGETVGEVRAVADMHQRKAEMAKHSDAFIALPEENNLVK 124
Query: 125 -----------------GGYGTIEELLEIIAWAQLGIHNKPVGLLNVDGYYNNLLSLFDK 167
GYGT+EELLE+I WAQLGIH+KPVGLLNVDGYYN+LLS DK
Sbjct: 125 LKNMLSWSSCSVKATLKSGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDK 184
Query: 168 GVEEGFIDAAARNIFVLADNAGELLTKL 195
VEEGFI AR I V A A EL+ KL
Sbjct: 185 AVEEGFISPTAREIIVSAPTAKELVKKL 212
>AT4G35190.1 | chr4:16746724-16748090 FORWARD LENGTH=229
Length = 228
Score = 215 bits (547), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 102/175 (58%), Positives = 126/175 (72%)
Query: 21 RTICVFCGSRRGNRPSFSAAALDLGKQLVEREXXXXXXXXXXXXXXXVSKTVHDGGRHVL 80
+ +CVFCGS G R +S AA DL ++LV R VS+ VH+ G HVL
Sbjct: 9 KRVCVFCGSSSGKRECYSDAATDLAQELVTRRLNLVYGGGSIGLMGLVSQAVHEAGGHVL 68
Query: 81 GVIPSALLPEEVSGETLGEAKVVRDMHERKSEMAKHADAFIALPGGYGTIEELLEIIAWA 140
G+IP L+ +E++GET GE V DMHERK+EMA+H+D FIALPGGYGT+EELLE+IAWA
Sbjct: 69 GIIPRTLMDKEITGETYGEVIAVADMHERKAEMARHSDCFIALPGGYGTLEELLEVIAWA 128
Query: 141 QLGIHNKPVGLLNVDGYYNNLLSLFDKGVEEGFIDAAARNIFVLADNAGELLTKL 195
QLGIH+KPVGLLNVDGYYN LL+ DK V++GFI + R+IFV A NA EL+ KL
Sbjct: 129 QLGIHDKPVGLLNVDGYYNYLLTFIDKAVDDGFIKPSQRHIFVSAPNAKELVQKL 183
>AT2G35990.1 | chr2:15114070-15116647 FORWARD LENGTH=214
Length = 213
Score = 214 bits (545), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 100/175 (57%), Positives = 124/175 (70%)
Query: 21 RTICVFCGSRRGNRPSFSAAALDLGKQLVEREXXXXXXXXXXXXXXXVSKTVHDGGRHVL 80
R ICVFCGS GN+ ++ AAL L QLVER +S+ VHDGGRHVL
Sbjct: 9 RRICVFCGSSSGNKTTYHDAALQLAHQLVERNIDLVYGGGSVGLMGLISQAVHDGGRHVL 68
Query: 81 GVIPSALLPEEVSGETLGEAKVVRDMHERKSEMAKHADAFIALPGGYGTIEELLEIIAWA 140
G+IP +L P E++GE++GE V MH+RK+EM + ADAFIALPGGYGT EELLE+I W+
Sbjct: 69 GIIPKSLAPREITGESIGEVITVSTMHQRKAEMGRQADAFIALPGGYGTFEELLEVITWS 128
Query: 141 QLGIHNKPVGLLNVDGYYNNLLSLFDKGVEEGFIDAAARNIFVLADNAGELLTKL 195
QLGIH KPVGLLNVDG+Y++LL+ DK V+EGF+ + AR I V A NA +LL L
Sbjct: 129 QLGIHTKPVGLLNVDGFYDSLLTFIDKAVDEGFVSSTARRIIVSAPNAPQLLQLL 183
>AT5G03270.1 | chr5:781870-783997 FORWARD LENGTH=230
Length = 229
Score = 180 bits (456), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 100/189 (52%), Positives = 122/189 (64%), Gaps = 17/189 (8%)
Query: 21 RTICVFCGSRRGNRPSFSAAALDLGKQLVEREXXXXXXXXXXXXXXXVSKTVHDGGR--- 77
++ICVFCGS GN+ S+ AA+DL K+LV R+ VS+ VHDGGR
Sbjct: 19 KSICVFCGSSNGNKASYQDAAIDLAKELVMRKIDLVYGGGSIGLMGLVSQAVHDGGRHNN 78
Query: 78 -----------HVLGVIPSALLPEEVSGETLGEAKVVRDMHERKSEMAKHADAFIALPGG 126
H + V + +++GET+GE K V DMH+RK+ MAKH+DAFI LPGG
Sbjct: 79 NNNGNDDALFCHSVNVSQT---NSKLTGETVGEVKEVADMHQRKAVMAKHSDAFITLPGG 135
Query: 127 YGTIEELLEIIAWAQLGIHNKPVGLLNVDGYYNNLLSLFDKGVEEGFIDAAARNIFVLAD 186
YGT+EELLE+I WAQLGIH+KPVGLLNVDGYY+ LL DK VEEGFI AR+I V A
Sbjct: 136 YGTLEELLEVITWAQLGIHDKPVGLLNVDGYYDALLLFIDKAVEEGFILPTARHIIVSAP 195
Query: 187 NAGELLTKL 195
A EL KL
Sbjct: 196 TARELFIKL 204
>AT5G26140.1 | chr5:9130796-9131636 FORWARD LENGTH=144
Length = 143
Score = 140 bits (353), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 71/107 (66%), Positives = 83/107 (77%), Gaps = 1/107 (0%)
Query: 90 EEVSGETLGEAKVVRDMHERKSEMAKHADAFIALPGG-YGTIEELLEIIAWAQLGIHNKP 148
E +SGET+GE ++V DMHERK+ MA+ A AFIAL G Y T+EELLE+I WAQLGIH K
Sbjct: 4 EHISGETVGEVRIVSDMHERKATMAQEAGAFIALLGERYETMEELLEMITWAQLGIHKKT 63
Query: 149 VGLLNVDGYYNNLLSLFDKGVEEGFIDAAARNIFVLADNAGELLTKL 195
VGLLNVDGYYNNLL+ FD GVEEGFI A NI V A +A EL+ K+
Sbjct: 64 VGLLNVDGYYNNLLAFFDTGVEEGFIKQGACNIVVSAPSARELMEKM 110
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.317 0.136 0.391
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 4,206,557
Number of extensions: 157363
Number of successful extensions: 325
Number of sequences better than 1.0e-05: 9
Number of HSP's gapped: 322
Number of HSP's successfully gapped: 9
Length of query: 230
Length of database: 11,106,569
Length adjustment: 95
Effective length of query: 135
Effective length of database: 8,502,049
Effective search space: 1147776615
Effective search space used: 1147776615
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 110 (47.0 bits)