BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0665200 Os03g0665200|AK066202
(302 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G22550.1 | chr3:7991827-7992805 REVERSE LENGTH=268 123 1e-28
AT3G63210.1 | chr3:23354019-23354906 REVERSE LENGTH=264 100 7e-22
AT5G11460.1 | chr5:3657064-3658388 REVERSE LENGTH=345 89 2e-18
AT2G25690.1 | chr2:10940530-10941649 REVERSE LENGTH=325 87 1e-17
AT5G20700.1 | chr5:7006178-7007003 REVERSE LENGTH=249 66 2e-11
AT1G22160.1 | chr1:7823238-7823774 FORWARD LENGTH=148 62 4e-10
AT2G44670.1 | chr2:18425279-18425673 FORWARD LENGTH=94 60 2e-09
AT1G78020.1 | chr1:29338787-29339491 FORWARD LENGTH=163 59 2e-09
AT1G53903.1 | chr1:20132363-20132842 FORWARD LENGTH=127 59 3e-09
AT1G53885.1 | chr1:20119798-20120277 FORWARD LENGTH=127 59 3e-09
AT4G17670.1 | chr4:9833948-9834663 REVERSE LENGTH=160 58 7e-09
AT1G79970.1 | chr1:30082773-30083592 FORWARD LENGTH=241 57 1e-08
AT5G49120.1 | chr5:19908800-19909332 REVERSE LENGTH=151 57 1e-08
AT5G47060.1 | chr5:19116843-19117639 FORWARD LENGTH=178 55 3e-08
AT5G65040.1 | chr5:25977864-25978350 REVERSE LENGTH=114 55 4e-08
AT4G39795.1 | chr4:18466621-18467325 FORWARD LENGTH=127 52 4e-07
AT1G74940.1 | chr1:28146284-28147065 FORWARD LENGTH=223 49 4e-06
>AT3G22550.1 | chr3:7991827-7992805 REVERSE LENGTH=268
Length = 267
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 85/234 (36%), Positives = 115/234 (49%), Gaps = 26/234 (11%)
Query: 73 SPTSILETKQFCCSSAMPPFLSERSLRKAHVEMAAAPPEPAGVGLAD-VLREHHXXXXXX 131
SPTSIL+TK F S PF S+ + P+ G+ + D ++++
Sbjct: 51 SPTSILDTKPF--SVLKNPFGSDNPKTQEPETRLKLEPKRIGLAIVDSLIQDETPEPGPR 108
Query: 132 XXXXXXXSQLRIQVPTGRAVELVSSPI---EFGVKNRDAHLAAMSPARRF---LPEVVSS 185
SQLRI+VP SPI +FG+K R++ P P ++S
Sbjct: 109 SGTILFGSQLRIRVP--------DSPISSSDFGIKTRNSQPETKKPGSESGLGSPRIISG 160
Query: 186 PSARVFAAAVVSPGEMAMSEDYTCVISRGPNPRTTHIFDDCIVESCGDVLVEKVAXXXXX 245
F A+ +M +SEDYTCV GPNPRT HIFD+CIVES V+ + +
Sbjct: 161 ----YFPAS-----DMELSEDYTCVTCHGPNPRTIHIFDNCIVESQPGVVFFRSSDPVNE 211
Query: 246 XXXXAVRTNGFLNSCYACNKQLGHGNDIFIYRGDKAFCSSECRYQEMLFDEAVD 299
+ FL+ C C K LG +DIF+YRGD+AFCSSECR EM+ E D
Sbjct: 212 SDSDYSPPDSFLSCCCNCKKSLGPRDDIFMYRGDRAFCSSECRSIEMMMSEEND 265
>AT3G63210.1 | chr3:23354019-23354906 REVERSE LENGTH=264
Length = 263
Score = 100 bits (250), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 78/235 (33%), Positives = 103/235 (43%), Gaps = 43/235 (18%)
Query: 70 SSMSPTSILETKQFCCSSAMPPFLSERSLRKAHVEMAAAPPE----PAGVGLADVLRE-- 123
S +SPTSILE SS P +S + E P+ P GLAD++++
Sbjct: 61 SLVSPTSILEANPSIFSSKNPKPVS-------YFEPTIPNPQRFHSPDVFGLADLVKDGD 113
Query: 124 --HHXXXXXXXXXXXXXSQLRIQVPTGRAVELVSSPIEFGVKNRDAHLAAMSPARRFLPE 181
S+LR+Q+P+ +FG K R+ P
Sbjct: 114 SNRDHSRKPVNKMVLFGSKLRVQIPSS---------ADFGTKT----------GIRY-PP 153
Query: 182 VVSSPSARVFAAAVVSPGEMAMSEDYTCVISRGPNPRTTHIFDDCIVESCGDVLVEKVAX 241
SP + AV E+ +EDYT VIS GPNP THIFD+ + V +
Sbjct: 154 CQLSPCVQTKVLAV---SEIDQTEDYTRVISHGPNPTITHIFDNSVF-----VEATPCSV 205
Query: 242 XXXXXXXXAVRTNGFLNSCYACNKQLGHGNDIFIYRGDKAFCSSECRYQEMLFDE 296
T FL+ C+ C K L DI+IYRG+K FCSSECRYQEML D+
Sbjct: 206 PLPQPAMETKSTESFLSRCFTCKKNLDQKQDIYIYRGEKGFCSSECRYQEMLLDQ 260
>AT5G11460.1 | chr5:3657064-3658388 REVERSE LENGTH=345
Length = 344
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/105 (43%), Positives = 62/105 (59%), Gaps = 12/105 (11%)
Query: 200 EMAMSEDYTCVISRGPNPRTTHIFDDCIVES----------CGDVL--VEKVAXXXXXXX 247
+M +SEDYTCVIS GPNP+TTH + D ++ES C + + VA
Sbjct: 203 DMEISEDYTCVISHGPNPKTTHFYGDQVMESVEREELKNRCCKNEKESIFAVAPLDLTTP 262
Query: 248 XXAVRTNGFLNSCYACNKQLGHGNDIFIYRGDKAFCSSECRYQEM 292
+ FL+ CY C+K+LG G DI++Y G KAFCSSECR +E+
Sbjct: 263 VDVLPPKDFLSFCYGCSKKLGMGEDIYMYSGYKAFCSSECRSKEI 307
>AT2G25690.1 | chr2:10940530-10941649 REVERSE LENGTH=325
Length = 324
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 59/92 (64%), Gaps = 3/92 (3%)
Query: 205 EDYTCVISRGPNPRTTHIFDDCIVESCGDVLVEKVAXXXXXXXXXAVRTNGFLNSCYACN 264
EDYTC+I+ GPNP+TTHI+ D ++E + L K ++ FL C CN
Sbjct: 218 EDYTCIIAHGPNPKTTHIYGDRVLECHKNEL--KGDEDNKEKFGSVFPSDNFLGICNFCN 275
Query: 265 KQLGHGNDIFIYRGDKAFCSSECRYQEMLFDE 296
K+LG G+DI++YR +K+FCS ECR +EM+ DE
Sbjct: 276 KKLGGGDDIYMYR-EKSFCSEECRSEEMMIDE 306
>AT5G20700.1 | chr5:7006178-7007003 REVERSE LENGTH=249
Length = 248
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
Query: 255 GFLNSCYACNKQLGHGNDIFIYRGDKAFCSSECRYQEMLFDEAVDNLR 302
GFLNSCY C K+L HG DIFIYRG+KAFCS+ECR + DE + R
Sbjct: 181 GFLNSCYLCRKKL-HGQDIFIYRGEKAFCSTECRSSHIANDERKERCR 227
>AT1G22160.1 | chr1:7823238-7823774 FORWARD LENGTH=148
Length = 147
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 31/44 (70%)
Query: 253 TNGFLNSCYACNKQLGHGNDIFIYRGDKAFCSSECRYQEMLFDE 296
+ FL SC C + L HG DI++YRGD+AFCS ECR Q++ DE
Sbjct: 75 SEDFLRSCSLCKRLLVHGRDIYMYRGDRAFCSLECRQQQITVDE 118
>AT2G44670.1 | chr2:18425279-18425673 FORWARD LENGTH=94
Length = 93
Score = 59.7 bits (143), Expect = 2e-09, Method: Composition-based stats.
Identities = 26/42 (61%), Positives = 32/42 (76%)
Query: 256 FLNSCYACNKQLGHGNDIFIYRGDKAFCSSECRYQEMLFDEA 297
FL SC C K LG +DIF+YRGDKAFCS+ECR +++ DEA
Sbjct: 16 FLESCSLCRKHLGLNSDIFMYRGDKAFCSNECREEQIESDEA 57
>AT1G78020.1 | chr1:29338787-29339491 FORWARD LENGTH=163
Length = 162
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 30/41 (73%)
Query: 256 FLNSCYACNKQLGHGNDIFIYRGDKAFCSSECRYQEMLFDE 296
FL SC C + L G DI++YRGDKAFCSSECR ++M DE
Sbjct: 89 FLRSCALCERLLVPGRDIYMYRGDKAFCSSECRQEQMAQDE 129
>AT1G53903.1 | chr1:20132363-20132842 FORWARD LENGTH=127
Length = 126
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 29/41 (70%)
Query: 256 FLNSCYACNKQLGHGNDIFIYRGDKAFCSSECRYQEMLFDE 296
FL +C+ CNKQL D+++YRGD FCS ECR +ML D+
Sbjct: 42 FLKTCHLCNKQLHQDKDVYMYRGDLGFCSRECRESQMLIDD 82
>AT1G53885.1 | chr1:20119798-20120277 FORWARD LENGTH=127
Length = 126
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 29/41 (70%)
Query: 256 FLNSCYACNKQLGHGNDIFIYRGDKAFCSSECRYQEMLFDE 296
FL +C+ CNKQL D+++YRGD FCS ECR +ML D+
Sbjct: 42 FLKTCHLCNKQLHQDKDVYMYRGDLGFCSRECRESQMLIDD 82
>AT4G17670.1 | chr4:9833948-9834663 REVERSE LENGTH=160
Length = 159
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 24/42 (57%), Positives = 31/42 (73%)
Query: 256 FLNSCYACNKQLGHGNDIFIYRGDKAFCSSECRYQEMLFDEA 297
FL+SC+ C K+LG DIF+YRGD FCS ECR +++ DEA
Sbjct: 76 FLDSCFLCKKRLGDNRDIFMYRGDTPFCSEECREEQIERDEA 117
>AT1G79970.1 | chr1:30082773-30083592 FORWARD LENGTH=241
Length = 240
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 28/30 (93%)
Query: 200 EMAMSEDYTCVISRGPNPRTTHIFDDCIVE 229
EMA+SEDYTC+IS GPNP+TT+IF DCI++
Sbjct: 149 EMALSEDYTCIISHGPNPKTTYIFGDCILD 178
>AT5G49120.1 | chr5:19908800-19909332 REVERSE LENGTH=151
Length = 150
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 32/43 (74%)
Query: 254 NGFLNSCYACNKQLGHGNDIFIYRGDKAFCSSECRYQEMLFDE 296
+GFL C+ C ++L DI++Y+GD+AFCS ECR ++M+ DE
Sbjct: 66 SGFLEHCFLCRRKLLPAKDIYMYKGDRAFCSVECRSKQMIMDE 108
>AT5G47060.1 | chr5:19116843-19117639 FORWARD LENGTH=178
Length = 177
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 31/44 (70%)
Query: 256 FLNSCYACNKQLGHGNDIFIYRGDKAFCSSECRYQEMLFDEAVD 299
FL+SC+ C K LG DI++YRGD FCS ECR +++ DEA +
Sbjct: 97 FLDSCFLCKKPLGDNRDIYMYRGDTPFCSEECRQEQIERDEAKE 140
>AT5G65040.1 | chr5:25977864-25978350 REVERSE LENGTH=114
Length = 113
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 31/47 (65%)
Query: 250 AVRTNGFLNSCYACNKQLGHGNDIFIYRGDKAFCSSECRYQEMLFDE 296
A + FL +C CN+ L H DI++YRG+ AFCS ECR +++ DE
Sbjct: 51 ASNYDDFLKTCSLCNRSLCHHRDIYMYRGNNAFCSLECREKQIKLDE 97
>AT4G39795.1 | chr4:18466621-18467325 FORWARD LENGTH=127
Length = 126
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 28/42 (66%)
Query: 256 FLNSCYACNKQLGHGNDIFIYRGDKAFCSSECRYQEMLFDEA 297
FL +C C + L G DI++Y+GD AFCS ECR Q+M DE
Sbjct: 73 FLVNCGFCKRGLAPGRDIYMYKGDAAFCSIECREQQMEHDEG 114
>AT1G74940.1 | chr1:28146284-28147065 FORWARD LENGTH=223
Length = 222
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 30/41 (73%), Gaps = 1/41 (2%)
Query: 256 FLNSCYACNKQLGHGNDIFIYRGDKAFCSSECRYQEMLFDE 296
FL+SC C K+L G DI++Y+G+ FCS+ECR +++ DE
Sbjct: 150 FLSSCCLCKKKL-QGKDIYMYKGEMGFCSAECRSVQIMNDE 189
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.320 0.132 0.396
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 5,573,268
Number of extensions: 201596
Number of successful extensions: 474
Number of sequences better than 1.0e-05: 17
Number of HSP's gapped: 466
Number of HSP's successfully gapped: 17
Length of query: 302
Length of database: 11,106,569
Length adjustment: 98
Effective length of query: 204
Effective length of database: 8,419,801
Effective search space: 1717639404
Effective search space used: 1717639404
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 111 (47.4 bits)