BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0643100 Os03g0643100|AK106587
(413 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G24960.1 | chr2:10617263-10620034 FORWARD LENGTH=798 91 2e-18
AT4G02210.1 | chr4:974320-975917 REVERSE LENGTH=440 82 4e-16
AT3G11290.1 | chr3:3535766-3537295 REVERSE LENGTH=461 75 8e-14
AT2G19220.1 | chr2:8340678-8342161 REVERSE LENGTH=440 68 8e-12
AT3G11310.1 | chr3:3542536-3544333 REVERSE LENGTH=540 65 9e-11
AT4G02550.3 | chr4:1120622-1121674 REVERSE LENGTH=323 56 4e-08
AT5G05800.1 | chr5:1743234-1744751 REVERSE LENGTH=450 55 6e-08
AT2G29880.1 | chr2:12742536-12743545 FORWARD LENGTH=309 48 8e-06
>AT2G24960.1 | chr2:10617263-10620034 FORWARD LENGTH=798
Length = 797
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 121/261 (46%), Gaps = 17/261 (6%)
Query: 43 IWKAMPSKGSSQMTMTNQRNLSDRRAQQPLSQVYVDVDSEHGTAERQEIGTTKRARWSHQ 102
++K P S + + ++D R + ++ D +G + + + W+ +
Sbjct: 117 VYKTKPVLNFSDLCLIYGYTVADGRYSMSSHDLEIE-DEINGESVVLSGKESSKTEWTLE 175
Query: 103 MKMFLIELLTDHDVPGFRTQNAWSKEAWTNIVCRLNTKFGTSFTTNQVKQKEQDLKKDYR 162
M + +E++ D G +T NA+SK+AW +++ N +F + ++ + L K Y+
Sbjct: 176 MDQYFVEIMVDQIGRGNKTGNAFSKQAWIDMLVLFNARFSGQYGKRVLRHRYNKLLKYYK 235
Query: 163 SVKDLLDQSGFGWDSDRMMVSAPQSVWDTFADRKNKDAIHWRDKSFPYFDDLAPLYDGRY 222
++ +L + GF WD R+M+SA +VWD++ + + A +R KS P ++DL ++ +
Sbjct: 236 DMEAILKEDGFSWDETRLMISADDAVWDSYI-KDHPLARTYRMKSLPSYNDLDTIFACQ- 293
Query: 223 AEGRTRHGMDHYARKTKNAPAHSTQEANAVDTYQSP-------------SPNSNAPGESG 269
AE T H D A +T A Q ++ + +P N N G++
Sbjct: 294 AEQGTDHRDDGSAAQTSETKASQEQNSDRTRIFWTPPMDYHLIDLLVEQVNNGNRVGQTF 353
Query: 270 LQFPFGEEVETANLDF-SQHS 289
+ + E V N F SQH+
Sbjct: 354 ITSAWNEMVTAFNAKFGSQHN 374
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 69/131 (52%), Gaps = 1/131 (0%)
Query: 96 RARWSHQMKMFLIELLTDHDVPGFRTQNAWSKEAWTNIVCRLNTKFGTSFTTNQVKQKEQ 155
R W+ M+ F I+L+ +H G RT + ++K+AW ++ N+KFG+ + + +K +
Sbjct: 12 RTYWTPTMERFFIDLMLEHLHRGNRTGHTFNKQAWNEMLTVFNSKFGSQYDKDVLKSRYT 71
Query: 156 DLKKDYRSVKDLLDQSGFGWDSDRMMVSAPQSVWDTFADRKNKDAIHWRDKSFPYFDDLA 215
+L K Y VK LLD GF WD V S+W + + + +A ++ K F DL
Sbjct: 72 NLWKQYNDVKCLLDHGGFVWDQTHQTVIGDDSLWSLYL-KAHPEARVYKTKPVLNFSDLC 130
Query: 216 PLYDGRYAEGR 226
+Y A+GR
Sbjct: 131 LIYGYTVADGR 141
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 52/97 (53%)
Query: 96 RARWSHQMKMFLIELLTDHDVPGFRTQNAWSKEAWTNIVCRLNTKFGTSFTTNQVKQKEQ 155
R W+ M LI+LL + G R + AW +V N KFG+ + +K + +
Sbjct: 324 RIFWTPPMDYHLIDLLVEQVNNGNRVGQTFITSAWNEMVTAFNAKFGSQHNKDVLKNRYK 383
Query: 156 DLKKDYRSVKDLLDQSGFGWDSDRMMVSAPQSVWDTF 192
L++ Y +K LL+Q+GF WD+ R MV A +W+T+
Sbjct: 384 HLRRLYNDIKFLLEQNGFSWDARRDMVIADDDIWNTY 420
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/119 (21%), Positives = 58/119 (48%), Gaps = 1/119 (0%)
Query: 99 WSHQMKMFLIELLTDHDVPGFRTQNAWSKEAWTNIVCRLNTKFGTSFTTNQVKQKEQDLK 158
W+ M LI+L+ + G + ++++AW ++ N KFG ++ + L
Sbjct: 534 WTRVMDHCLIDLMLEQVSRGNKIGETFTEQAWADMAESFNAKFGLQTDMFMLENRYILLM 593
Query: 159 KDYRSVKDLLDQSGFGWDSDRMMVSAPQSVWDTFADRKNKDAIHWRDKSFPYFDDLAPL 217
K+ + ++L+ GF WD ++ + A W+ + +++ DA ++ K+ + +L L
Sbjct: 594 KERDDINNILNLDGFTWDVEKQTIVAEDEYWEAYI-KEHPDATIYKGKTLDSYGNLCKL 651
>AT4G02210.1 | chr4:974320-975917 REVERSE LENGTH=440
Length = 439
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 98/223 (43%), Gaps = 8/223 (3%)
Query: 93 TTKRARWSHQMKMFLIELLTDHDVPGFRTQNAWSKEAWTNIVCRLNTKFGTSFTTNQVKQ 152
T R W M + I+L+ D G + + + K+AWT +V N KF ++F + +K
Sbjct: 180 TRCRTTWHPPMDRYFIDLMLDQARRGNQIEGVFRKQAWTEMVNLFNAKFESNFDVDVLKN 239
Query: 153 KEQDLKKDYRSVKDLLDQSGFGWDSDRMMVSAPQSVWDTFADRKNKDAIHWRDKSFPYFD 212
+ + L++ + ++K +L GF WD++R MV+A +VW + + ++DA + + PY+
Sbjct: 240 RYKSLRRQFNAIKSILRSDGFAWDNERQMVTADNNVWQDYI-KAHRDARQFMTRPIPYYK 298
Query: 213 DLAPLY-DGRYAEGRTRHGMDHYARKTKNAPAHSTQEANAVDTYQSPSPNSNAPGESGLQ 271
DL L D E MD + P QE + T S L
Sbjct: 299 DLCVLCGDSGIEENECFVAMDWF------DPETEFQEFKSSGTTDLSISAEEEDSNSLLF 352
Query: 272 FPFGEEVETANLDFSQHSPTPVHLTKVPPSSAQTPSEVPESRP 314
P + + AN D S +P + + S + E ++ P
Sbjct: 353 DPKNKRDQLANTDTSPINPKKPRVDETQTMSIEDTVEAIQALP 395
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 84/175 (48%), Gaps = 9/175 (5%)
Query: 96 RARWSHQMKMFLIELLTDHDVPGFRTQN-AWSKEAWTNIVCRLNTKFGTSFTTNQVKQKE 154
R W+ +M + IEL+ + G R ++ +SK AW + C KF + + +K +
Sbjct: 11 RTVWTPEMDQYFIELMVEQVRKGNRFEDHLFSKRAWKFMSCSFTAKFKFLYGKDVLKNRH 70
Query: 155 QDLKKDYRSVKDLLDQSGFGWDSDRMMVSAPQSVWDTFADRKNKDAIHWRDKSFPYFDDL 214
+ L+ ++SV +LL + GF WD R MV A VWD + + + D+ +R KS P + DL
Sbjct: 71 KTLRNLFKSVNNLLIEDGFSWDDTRQMVVADNCVWDEYL-KIHPDSRSFRIKSIPCYKDL 129
Query: 215 APLYDGRYAEGRTRHGMDHYARKTKNAPAHSTQEANAVD-TYQSPSPNSNAPGES 268
+Y +E + + KT QE + + +S + SN+ G S
Sbjct: 130 CLVYSDGMSEHKAEESISEGESKT------LIQEDDGYNRICESSTVRSNSKGSS 178
>AT3G11290.1 | chr3:3535766-3537295 REVERSE LENGTH=461
Length = 460
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 131/314 (41%), Gaps = 34/314 (10%)
Query: 96 RARWSHQMKMFLIELLTDHDVPGFRTQNAWSKEAWTNIVCRLNTKFGTSFTTNQVKQKEQ 155
+ WS ++LL + G R + + KE W I+ +N G SFT Q+K
Sbjct: 165 KGYWSPSSHELFVDLLFQEALKGNRPDSHYPKETWKMILETINQNTGKSFTRPQLKNHWD 224
Query: 156 DLKKDYRSVKDLLDQSGFGWDSDRMMVSAPQSVWDTFADRKNKDAIHWRDKSFPYFDDLA 215
+K ++ ++ WD+ A W + ++N A +R K P+ D LA
Sbjct: 225 CTRKSWKIWCQVIGAPVMKWDATSRTFGATDEDWKNYL-KENHRAAPFRRKQLPHADKLA 283
Query: 216 PLYDGRYAEGRTRHGMDHYARKTKNAPAHSTQ--EANAVDTYQSPSPNSNAPGESGLQFP 273
++ G G+ Y R+ + + S Q + + T + P S + G
Sbjct: 284 TIFKGLIEPGKAY--FRSYRRRVLDHHSESPQLHDPTPLSTLYTNEPVSGSEG------- 334
Query: 274 FGEEVETANLDFSQHSPTPVHLTKVPPSSAQTPSEVPESRPGKKQKIKSVSPDDGFHERY 333
G + + + D Q PTP H A++ + Q ++ V+P G H
Sbjct: 335 -GADEDDNDDDDEQ--PTPQHRRFNSVGFAES----------RLQDVEIVTP--GCHRLK 379
Query: 334 LKLKKEEIDRFAAIEEKKLEDPYSINKCITVLEGLHGLQIGD--ILVAADIFKGKDNREV 391
+L KE + + + Y+I +CI L+ + ++ G L A D+F K+ RE+
Sbjct: 380 TELMKE-----SPVSASVRQYEYTIGECIECLDSMEEVEQGSDLYLFALDLFVKKEYREI 434
Query: 392 FLSFSSDALRLAWI 405
FL + +LR++W+
Sbjct: 435 FLLLKNSSLRMSWL 448
>AT2G19220.1 | chr2:8340678-8342161 REVERSE LENGTH=440
Length = 439
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 67/326 (20%), Positives = 139/326 (42%), Gaps = 49/326 (15%)
Query: 90 EIGTTKRARWSHQMKMFLIELLTDHDVPGFR---TQNAWSKEAWTNIVCRLNTKFGTSFT 146
+I T + +WS +++ + G R + ++KE+W I+ ++N G +T
Sbjct: 156 DIATRRHYKWSPSSHAIVVDTCFQESLKGIRPIKRNHLFTKESWKMILEKINRITGLGYT 215
Query: 147 TNQVKQKEQDLKKDYRSVKDLLDQSGFGWDSDRMMVSAPQSVWDTFADRKNKDAIHWRDK 206
Q++ + ++ + + WD++ A + WD + NK A ++ +
Sbjct: 216 HKQLENHFTRTRTSWKHWCETIASPIMKWDANTRKFGATEEDWDKYL-MINKRARVFKRR 274
Query: 207 SFPYFDDLAPLYDGRYAEGRTRHGMDHYARKTKNAPAHSTQEANAVDTYQSPSPNSNAPG 266
P+ D LA ++ GR G+T+ Y ++ + + S Q + T S N+N P
Sbjct: 275 HIPHADKLATIFKGRIEPGKTK--TRRYRKRVIDHHSESPQLHDHQPTPSSVVVNTNEPV 332
Query: 267 ESGLQFPFGEEVETANLDFSQHSPTPVHLTKVPPSSAQTPSEVPESRPGKKQKIKSVSPD 326
+ + E N++ P S ++ SE ++V+P+
Sbjct: 333 KGS-----DDRAEDGNVE--------------PTSLIRSDSE---------DVAETVTPE 364
Query: 327 DGFHERYLKLKKEEIDRFAAIEEKKLEDPYSINKCITVLEGLHGLQIGD--ILVAADIFK 384
E+I A++++K + ++ +C+ L+ + ++ G + A D+FK
Sbjct: 365 ----------MMEKIPVNASVKKK---EKFTFEECVECLDAIEEVEKGGDLYMFALDLFK 411
Query: 385 GKDNREVFLSFSSDALRLAWIRKEIA 410
KD R +FL +LR+AW+ K ++
Sbjct: 412 TKDYRYLFLMLQKSSLRMAWLLKLLS 437
>AT3G11310.1 | chr3:3542536-3544333 REVERSE LENGTH=540
Length = 539
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 85/381 (22%), Positives = 149/381 (39%), Gaps = 85/381 (22%)
Query: 96 RARWSHQMKMFLIELLTDHDVPGFRTQNA-----WSKEAWTNIVCRLNTKFGTSFTTNQV 150
+A WS ++LL + R + A ++KE W +V N K G +T Q+
Sbjct: 173 KAYWSSSSHEIFVDLLFTESLKENRPKPARRNGYYAKETWNMMVESFNQKTGLRYTRKQL 232
Query: 151 KQKEQDLKKDYRSVKDLLDQSGFGWDSDRMMVSAPQSVWDTFADRKNKDAIHWRDKSFPY 210
K + +R + WD++ A W+ ++ ++NK A +R K P+
Sbjct: 233 KNHWNITRDAWRRWCQAVGSPLLKWDANTKTFGATSEDWENYS-KENKRAEQFRLKHIPH 291
Query: 211 FDDLAPLYDGRYAEGRT-----RHGMDHYARKTKN-APAHSTQ--------EANAVDT-- 254
D LA ++ G G+T R ++H++ ++ AP+ + E A D
Sbjct: 292 ADKLAIIFKGHVEPGKTALRPYRKRVNHHSEAPQHPAPSSALNINESVPGSEGGADDDHH 351
Query: 255 ------YQSP-----------------------------------SPNSNAP-GESGLQF 272
++SP SP+ AP E +
Sbjct: 352 IVMDHHFESPHDPASSSEIDLNEPVTGSEGGADDDHYIVLNHLVESPHDRAPSSELDINK 411
Query: 273 PFGEEVETANLDFSQHSPTPVHLTKVPPSSAQTPSEVPESRPGKKQKIKSVSPDDGFHER 332
P +E D H PTP H A V ES Q +++V+P ER
Sbjct: 412 PVA-GIEGIADDNDNHEPTPHHW-------AFNGVGVEES-----QDVETVTPAPC--ER 456
Query: 333 YLKLKKEEIDRFAAIEEKKLEDPYSINKCITVLEGLHGLQIGD--ILVAADIFKGKDNRE 390
E+I A ++E + Y+I +C+ L + ++ G ++A D+F K+ RE
Sbjct: 457 INIELVEKITSNALVKEYE----YTIGECMKCLNAMEEVEKGSELYMLALDLFMNKECRE 512
Query: 391 VFLSFSSDALRLAWIRKEIAA 411
+FL + LR++W+ + ++
Sbjct: 513 MFLLLETSTLRMSWLLRRLSG 533
>AT4G02550.3 | chr4:1120622-1121674 REVERSE LENGTH=323
Length = 322
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 82/201 (40%), Gaps = 24/201 (11%)
Query: 86 AERQEIGTTKR-ARWSHQMKMFLIELLTDHDVPGFRTQNAWSKEAWTNIVCRLNTKFGTS 144
ER+E+ R WS M LIE L G + ++ +A+T +NT+F +
Sbjct: 23 VERKEMKHKGRNVIWSVGMDKCLIEALAVQAKNGNKVDKCFNDKAYTAACVAVNTRFNLN 82
Query: 145 FTTNQVKQKEQDLKKDYRSVKDLLDQSGFGWDSDRMMVSAPQ-SVWDTFADRKNKDAIHW 203
T+ + + + +KK YR ++D+L + GF W+S M+ +W + N DA +
Sbjct: 83 LTSQKAINRLKTIKKRYRVMRDILSRDGFWWNSSTKMIDCESDELWRRYI-AVNPDAKAF 141
Query: 204 RDKSFPYFDDLAPLYDGRYAEGRTRHGMDHYARKTKNAPAHSTQEANAVDTYQSPSPNSN 263
R K +++L RT G K S+ N V ++
Sbjct: 142 RGKQIEMYEEL-----------RTVCGDYQTPGKYNKVKKESSHHLNDVKQFE------- 183
Query: 264 APGESGLQFPFGEEVETANLD 284
E + FP G E ++ D
Sbjct: 184 ---EDSVSFPLGSSEEHSDTD 201
>AT5G05800.1 | chr5:1743234-1744751 REVERSE LENGTH=450
Length = 449
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 57/132 (43%), Gaps = 1/132 (0%)
Query: 96 RARWSHQMKMFLIELLTDHDVPGFRTQNAWSKEAWTNIVCRLNTKFGTSFTTNQVKQKEQ 155
+ WS ++LL + G R ++KE W I+ +N G +T Q+K
Sbjct: 167 KGYWSPSTHKLFLDLLVQETLKGNRPDTHFNKEGWKTILGTINENTGLGYTRPQLKNHWD 226
Query: 156 DLKKDYRSVKDLLDQSGFGWDSDRMMVSAPQSVWDTFADRKNKDAIHWRDKSFPYFDDLA 215
+K ++ L+ S WD + A + W + R+N A +R K P+ D LA
Sbjct: 227 CTRKAWKIWCQLVGASSMKWDPESRSFGATEEEWRIYI-RENPRAGQFRHKEVPHADQLA 285
Query: 216 PLYDGRYAEGRT 227
+++G G T
Sbjct: 286 IIFNGVIEPGET 297
>AT2G29880.1 | chr2:12742536-12743545 FORWARD LENGTH=309
Length = 308
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 59/136 (43%), Gaps = 4/136 (2%)
Query: 99 WSHQMKMFLIELLTDHDVPGFRTQNAWSKEAWT--NIVCRLNTKFGTSFTTNQVKQKEQD 156
WS Q L +L D G+R +N + I+ LN KF + T + +
Sbjct: 22 WSDQECYELTAILVDAIKRGWRDKNGTISKTTVERKILPLLNKKFKCNKTYTNYLSRMKS 81
Query: 157 LKKDYRSVKDLL-DQSGFGWDSDRMMVSAPQSVWDTFADRKNKDAIHWRDKSFPYFDDLA 215
+KK+Y L SGFGWD +AP VW + + + H R +F F+DL
Sbjct: 82 MKKEYSVYAALFWFSSGFGWDPITKQFTAPDDVWAAYL-MGHPNHHHMRTSTFEDFEDLQ 140
Query: 216 PLYDGRYAEGRTRHGM 231
+++ A+G G+
Sbjct: 141 LIFESAIAKGNNAFGL 156
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.315 0.130 0.393
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 9,049,696
Number of extensions: 411854
Number of successful extensions: 1576
Number of sequences better than 1.0e-05: 8
Number of HSP's gapped: 1577
Number of HSP's successfully gapped: 12
Length of query: 413
Length of database: 11,106,569
Length adjustment: 101
Effective length of query: 312
Effective length of database: 8,337,553
Effective search space: 2601316536
Effective search space used: 2601316536
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.5 bits)
S2: 113 (48.1 bits)