BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0639700 Os03g0639700|AK099587
(418 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G79050.1 | chr1:29737084-29740140 REVERSE LENGTH=440 589 e-169
AT2G19490.1 | chr2:8441732-8444006 FORWARD LENGTH=431 266 1e-71
AT3G10140.1 | chr3:3134984-3137069 FORWARD LENGTH=390 177 1e-44
AT3G32920.1 | chr3:13485399-13486713 REVERSE LENGTH=227 162 3e-40
AT5G20850.1 | chr5:7070758-7072860 REVERSE LENGTH=343 50 2e-06
AT3G22880.1 | chr3:8097948-8100740 REVERSE LENGTH=345 50 3e-06
>AT1G79050.1 | chr1:29737084-29740140 REVERSE LENGTH=440
Length = 439
Score = 589 bits (1519), Expect = e-169, Method: Compositional matrix adjust.
Identities = 288/345 (83%), Positives = 308/345 (89%)
Query: 56 NGALSGEDDPRLIDRQKALDAAMNDINSSFGKGSVTRLGSAGGAFVETFPSGCLTLDFAL 115
NGALS + D R +DRQKAL+AAMNDINSSFGKGSVTRLGSAGGA VETF SG LTLD AL
Sbjct: 69 NGALSPDADSRFLDRQKALEAAMNDINSSFGKGSVTRLGSAGGALVETFSSGILTLDLAL 128
Query: 116 GGGLPKGRVVEVYGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKALGVDIE 175
GGGLPKGRVVE+YGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKALGVD+E
Sbjct: 129 GGGLPKGRVVEIYGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKALGVDVE 188
Query: 176 NLIVCQPDNGEMALEIADRMCRSGAIDLICIDSVSALTPRAEIEGEIGMQQMGLQARLMS 235
NLIVCQPDNGEMALE ADRMCRSGA+DLIC+DSVSALTPRAEIEGEIGMQQMGLQARLMS
Sbjct: 189 NLIVCQPDNGEMALETADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMS 248
Query: 236 QALRKMSGNASKAGCTLMFLNQIRYKIGVFYGNPEVTSGGIALKFFASVRLEIRPIGKIK 295
QALRKMSGNASKAGCTL+FLNQIRYKIGV+YGNPEVTSGGIALKFFASVRLEIR GKIK
Sbjct: 249 QALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSAGKIK 308
Query: 296 SAKGDEDXXXXXXXXXXXXXXXXPYKQAEFEIIFGEGVSKLGCVLDCAELMEVVAKKGSW 355
S+KGDED PYKQAEFEI+FGEGVSKLGCVLDCAE+MEVV KKGSW
Sbjct: 309 SSKGDEDIGLRARVRVQKSKVSRPYKQAEFEIMFGEGVSKLGCVLDCAEIMEVVVKKGSW 368
Query: 356 YSYKEMRLGQGREKALQYLRESPTICDEIEKAVRAMIPEGARHMS 400
YSY++ RLGQGREKALQ+LRE+P + DEIEK VR ++ +G H S
Sbjct: 369 YSYEDQRLGQGREKALQHLRENPALQDEIEKKVRLLMLDGEVHRS 413
>AT2G19490.1 | chr2:8441732-8444006 FORWARD LENGTH=431
Length = 430
Score = 266 bits (681), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 153/335 (45%), Positives = 220/335 (65%), Gaps = 8/335 (2%)
Query: 60 SGEDDPRLIDRQKALDAAMNDINSSFGKGSVTRLGSAGGA-FVETFPSGCLTLDFALG-G 117
+G + + ++ AL A++ I SSFGKGS+ LG A V F +G LD ALG G
Sbjct: 48 NGSSEEGMSKKEIALQQALDQITSSFGKGSIMYLGRAVSPRNVPVFSTGSFALDVALGVG 107
Query: 118 GLPKGRVVEVYGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKALGVDIENL 177
GLPKGRVVE+YGPE+SGKTTLALH IAE QK GG + VDAEHA D + +KA+GV+ ENL
Sbjct: 108 GLPKGRVVEIYGPEASGKTTLALHVIAEAQKQGGTCVFVDAEHALDSSLAKAIGVNTENL 167
Query: 178 IVCQPDNGEMALEIADRMCRSGAIDLICIDSVSALTPRAEIEGEIGMQQMGLQARLMSQA 237
++ QPD GE AL + D + RSG++D+I +DSV+AL P+ E+EGE+G M +QARLMSQA
Sbjct: 168 LLSQPDCGEQALSLVDTLIRSGSVDVIVVDSVAALVPKGELEGEMGDAHMAMQARLMSQA 227
Query: 238 LRKMSGNASKAGCTLMFLNQIRYKIGVF--YGNP-EVTSGGIALKFFASVRLEIRPIGKI 294
LRK+S + S + L+F+NQ+R K+ F +G P EVT GG ALKF+AS+RL I+ IG I
Sbjct: 228 LRKLSHSLSLSQTLLIFINQVRSKLSTFGGFGGPTEVTCGGNALKFYASMRLNIKRIGLI 287
Query: 295 KSAKGDEDXXXXXXXXXXXXXXXXPYKQAEFEIIFGEGVSKLGCVLDCAELMEVVAKKGS 354
K KG+E P++ A+FE+ FG+G+ K+ ++D + + +AK G+
Sbjct: 288 K--KGEETTGSQVSVKIVKNKLAPPFRTAQFELEFGKGICKITEIIDLSIKHKFIAKNGT 345
Query: 355 WYSYKEMRLGQGREKALQYLRESPTICDEIEKAVR 389
+Y+ G+E ++L+++ + +E+ K ++
Sbjct: 346 FYNLNGKNY-HGKEALKRFLKQNESDQEELMKKLQ 379
>AT3G10140.1 | chr3:3134984-3137069 FORWARD LENGTH=390
Length = 389
Score = 177 bits (448), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 122/335 (36%), Positives = 191/335 (57%), Gaps = 8/335 (2%)
Query: 63 DDPRLIDRQKALDAAMNDINSSFGKGSVTRLGS-AGGAFVETFPSGCLTLDFALG-GGLP 120
DD ++ ++ AL A++ ++ F K S L V +G L LD ALG GGLP
Sbjct: 55 DDRKVAEKDTALHLALSQLSGDFDKDSKLSLQRFYRKRRVSVISTGSLNLDLALGVGGLP 114
Query: 121 KGRVVEVYGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKALGVDIENLIVC 180
KGR+VEVYG E+SGKTTLALH I E QKLGG +DAE+A DP+ ++++GV+ E L++
Sbjct: 115 KGRMVEVYGKEASGKTTLALHIIKEAQKLGGYCAYLDAENAMDPSLAESIGVNTEELLIS 174
Query: 181 QPDNGEMALEIADRMCRSGAIDLICIDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRK 240
+P + E L I D + +SG++D+I +DSV+AL P+ E++ +G + Q+R+M+QALRK
Sbjct: 175 RPSSAEKMLNIVDVLTKSGSVDVIVVDSVAALAPQCELDAPVGERYRDTQSRIMTQALRK 234
Query: 241 MSGNASKAGCTLMFLNQIRYKIGVFYGNP---EVTSGGIALKFFASVRLEIRPIGKIKSA 297
+ + + ++FLNQ+R + P EVT GG AL F A++RL++ G IK+A
Sbjct: 235 IHYSVGYSQTLIVFLNQVRSHVKSNMHFPHAEEVTCGGNALPFHAAIRLKMIRTGLIKTA 294
Query: 298 KGDEDXXXXXXXXXXXXXXXXPYKQAEFEIIFGEGVSKLGCVLDCAELMEVVAKKGSWYS 357
++ K++E I FG G VL+ A V+ ++G+ Y
Sbjct: 295 --NKISGLNVCVQVVKNKLAPGKKKSELGIHFGHGFYVEREVLELACEHGVILREGTSY- 351
Query: 358 YKEMRLGQGREKALQYLRESPTICDEIEKAVRAMI 392
+ E + +G++ A +YL E+ D + +R +
Sbjct: 352 FIEGEVIEGKDAAEKYLVENKEALDTVVAILRNQL 386
>AT3G32920.1 | chr3:13485399-13486713 REVERSE LENGTH=227
Length = 226
Score = 162 bits (410), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 99/202 (49%), Positives = 138/202 (68%), Gaps = 21/202 (10%)
Query: 101 VETFPSGCLTLDFALG-GGLPKGRVVEVYGPESSGKTTLALHAIAEVQKLGGNAMLVDAE 159
V F +G LD ALG GGLPKGR+VE+YGPE+SGKT LALH ++ +L+ +
Sbjct: 12 VPVFSTGSFALDVALGVGGLPKGRLVEIYGPEASGKTALALHMLS--------MLLIRS- 62
Query: 160 HAFDPAYSKALGVDIENLIVCQPDNGEMALEIADRMCRSGAIDLICIDSVSALTPRAEIE 219
+KA+GV+ ENL++ QPD G+ AL + D + +SG++D+I +DSV+AL P+ E++
Sbjct: 63 ------LAKAIGVNTENLLLSQPDCGKQALSLVDTLIQSGSVDVIVVDSVAALVPKGELD 116
Query: 220 GEIGMQQMGLQARLMSQALRKMSGNASKAGCTLMFLNQIRYKIGVFYGNPEVTSGGIALK 279
GE+G M +QARLMSQALRK S + + L+F+NQ+R + G G EVTSGG ALK
Sbjct: 117 GEMGDAHMAIQARLMSQALRKFSHSLLLSQTLLIFINQVRERFG---GPTEVTSGGNALK 173
Query: 280 FFASVRLEIRPIGKIKSAKGDE 301
F+A +RL+I+ IG IK KG+E
Sbjct: 174 FYAPMRLDIKRIGLIK--KGEE 193
>AT5G20850.1 | chr5:7070758-7072860 REVERSE LENGTH=343
Length = 342
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 91/208 (43%), Gaps = 32/208 (15%)
Query: 106 SGCLTLDFALGGGLPKGRVVEVYGPESSGKTTLALHAIAEVQKL-------GGNAMLVDA 158
SG LD L GG+ G + E+YG SGKT L H + +L G AM +DA
Sbjct: 107 SGSRELDKVLEGGIETGSITELYGEFRSGKTQLC-HTLCVTCQLPMDQGGGEGKAMYIDA 165
Query: 159 EHAFDPAYSKAL-------GVDI-ENLIVCQPDNGE----MALEIADRMCRSGAIDLICI 206
E F P + G D+ EN+ + N + + LE A M + L+ +
Sbjct: 166 EGTFRPQRLLQIADRFGLNGADVLENVAYARAYNTDHQSRLLLEAASMMIET-RFALLIV 224
Query: 207 DSVSALTPRAEI--EGEIGMQQMGLQARLMSQALRKMSGNASKAGCTLMFLNQIRYKI-- 262
DS +AL R + GE+ +QM L ++ LR + A + G ++ NQ+ ++
Sbjct: 225 DSATALY-RTDFSGRGELSARQMHL-----AKFLRSLQKLADEFGVAVVITNQVVAQVDG 278
Query: 263 GVFYGNPEVTS-GGIALKFFASVRLEIR 289
+ P+ GG + + RL +R
Sbjct: 279 SALFAGPQFKPIGGNIMAHATTTRLALR 306
>AT3G22880.1 | chr3:8097948-8100740 REVERSE LENGTH=345
Length = 344
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 95/210 (45%), Gaps = 27/210 (12%)
Query: 101 VETFPSGCLTLDFALGGGLPKGRVVEVYGPESSGKTTLALHAIAEVQKL-----GGNAML 155
V +GC LD LGGG+ + E +G SGKT LA H + +L GGN +
Sbjct: 105 VVKITTGCQALDDLLGGGIETSAITEAFGEFRSGKTQLA-HTLCVTTQLPTNMKGGNGKV 163
Query: 156 --VDAEHAFDP----AYSKALGVD----IENLIVCQPDNGE----MALEIADRMCRSGAI 201
+D E F P ++ G+D ++N+I + E + L +A +M
Sbjct: 164 AYIDTEGTFRPDRIVPIAERFGMDPGAVLDNIIYARAYTYEHQYNLLLGLAAKMSEE-PF 222
Query: 202 DLICIDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNASKAGCTLMFLNQIRYK 261
++ +DS+ AL R + G ++ + + ++Q L ++ A + + NQ+
Sbjct: 223 RILIVDSIIALF-RVDFTGR---GELADRQQKLAQMLSRLIKIAEEFNVAVYMTNQVIAD 278
Query: 262 I--GVFYGNPEVTSGGIALKFFASVRLEIR 289
G+F +P+ +GG L A++RL R
Sbjct: 279 PGGGMFISDPKKPAGGHVLAHAATIRLLFR 308
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.318 0.135 0.390
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 8,330,193
Number of extensions: 339106
Number of successful extensions: 1036
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 1029
Number of HSP's successfully gapped: 6
Length of query: 418
Length of database: 11,106,569
Length adjustment: 101
Effective length of query: 317
Effective length of database: 8,337,553
Effective search space: 2643004301
Effective search space used: 2643004301
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 113 (48.1 bits)