BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0596400 Os03g0596400|AK107535
(163 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G00380.1 | chr4:167959-170448 FORWARD LENGTH=636 134 2e-32
AT1G15910.1 | chr1:5465951-5468723 FORWARD LENGTH=635 133 5e-32
AT1G13790.1 | chr1:4727438-4730229 FORWARD LENGTH=737 127 4e-30
AT3G12550.1 | chr3:3978669-3981372 FORWARD LENGTH=639 122 1e-28
AT1G80790.1 | chr1:30360280-30362856 FORWARD LENGTH=635 120 3e-28
AT3G29375.1 | chr3:11280151-11281829 FORWARD LENGTH=356 117 2e-27
AT3G48670.1 | chr3:18031240-18033615 FORWARD LENGTH=648 108 9e-25
AT4G01780.1 | chr4:767310-769246 FORWARD LENGTH=473 105 1e-23
AT5G59390.1 | chr5:23954934-23957151 FORWARD LENGTH=562 105 1e-23
AT4G01180.1 | chr4:501287-503394 REVERSE LENGTH=555 92 2e-19
AT2G16490.1 | chr2:7146000-7147296 REVERSE LENGTH=180 56 7e-09
>AT4G00380.1 | chr4:167959-170448 FORWARD LENGTH=636
Length = 635
Score = 134 bits (337), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 64/149 (42%), Positives = 91/149 (61%), Gaps = 2/149 (1%)
Query: 17 VQGLEKMAGVRSIIGVKRMGELDQKAFYNACKNKMPNNKMKL--ALVCSKWEDEITKPEW 74
+ GL + G S IGVKRMGELD+K F + CK + N+ ++ A +CS W++ + P W
Sbjct: 487 IAGLTGLLGAESDIGVKRMGELDEKPFLDVCKLRYSANEARVEAATLCSTWKENLKNPSW 546
Query: 75 HPFKVIETAGQTKEIIKEDDGKLQALRAQYGDEACNVVVKALVEMNEYNPSGMYPVPELW 134
PFK T +E++ EDD +L+ L+ ++G E N V ALVEMNEYN SG YP ELW
Sbjct: 547 QPFKREGTGDGAEEVVDEDDEQLKKLKREWGKEVHNAVKAALVEMNEYNASGRYPTSELW 606
Query: 135 NFKQNRSAPMPEAASYLLKQWKTHKKRNT 163
NFK+ R A + E +++ K K++ T
Sbjct: 607 NFKEGRKATLKEVITFISTDIKNLKRKRT 635
>AT1G15910.1 | chr1:5465951-5468723 FORWARD LENGTH=635
Length = 634
Score = 133 bits (334), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 63/149 (42%), Positives = 91/149 (61%), Gaps = 2/149 (1%)
Query: 17 VQGLEKMAGVRSIIGVKRMGELDQKAFYNACKNKMPNNK--MKLALVCSKWEDEITKPEW 74
+ GL + G + IGVKRMGELD+K F + CK + N+ ++ A +CS W++ + P W
Sbjct: 486 IAGLTGLLGAETDIGVKRMGELDEKPFLDVCKLRYSANEAAVEAATLCSTWQENLKNPSW 545
Query: 75 HPFKVIETAGQTKEIIKEDDGKLQALRAQYGDEACNVVVKALVEMNEYNPSGMYPVPELW 134
PFK T +E++ EDD +L+ L+ ++G E N V ALVEMNEYN SG Y PELW
Sbjct: 546 QPFKHEGTGDGAEEVVDEDDEQLKKLKREWGKEVHNAVKTALVEMNEYNASGRYTTPELW 605
Query: 135 NFKQNRSAPMPEAASYLLKQWKTHKKRNT 163
NFK+ R A + E +++ K K++ T
Sbjct: 606 NFKEGRKATLKEVITFISNDIKILKRKRT 634
>AT1G13790.1 | chr1:4727438-4730229 FORWARD LENGTH=737
Length = 736
Score = 127 bits (318), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 64/132 (48%), Positives = 77/132 (58%), Gaps = 2/132 (1%)
Query: 26 VRSIIGVKRMGELDQKAFYNACKNKMP--NNKMKLALVCSKWEDEITKPEWHPFKVIETA 83
R+ IGVKRMG LD+ F K K P K +CS WE+ + WHP KV+E
Sbjct: 595 TRAYIGVKRMGALDETPFKKVAKEKYPAVEADKKAEELCSLWEEHLGDSAWHPIKVVEKD 654
Query: 84 GQTKEIIKEDDGKLQALRAQYGDEACNVVVKALVEMNEYNPSGMYPVPELWNFKQNRSAP 143
G KE + E+D KLQ LR + G+E V +AL E NEYN SG Y VPELWNFKQNR A
Sbjct: 655 GIAKEELNEEDEKLQELRKELGEEVYAAVTQALKERNEYNGSGRYIVPELWNFKQNRKAS 714
Query: 144 MPEAASYLLKQW 155
+ E YL+ W
Sbjct: 715 IKEGVVYLVNSW 726
>AT3G12550.1 | chr3:3978669-3981372 FORWARD LENGTH=639
Length = 638
Score = 122 bits (305), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 63/134 (47%), Positives = 82/134 (61%), Gaps = 4/134 (2%)
Query: 30 IGVKRMGELDQKAFYNACKNKMPNNKMK--LALVCSKWEDEITKPEWHPFKVI--ETAGQ 85
IGVKRMGELD K F A + K ++ V WE+ + P+WHPFK I ETA
Sbjct: 501 IGVKRMGELDTKPFMKAMRIKYCQEDLEDWAVEVIQLWEEYLKDPDWHPFKRIKLETAET 560
Query: 86 TKEIIKEDDGKLQALRAQYGDEACNVVVKALVEMNEYNPSGMYPVPELWNFKQNRSAPMP 145
E+I EDD KL+ L+ + GD+A V AL+E+NEYNPSG Y ELWNF+++R A +
Sbjct: 561 IVEVIDEDDEKLRTLKNELGDDAYQAVANALLEINEYNPSGRYISSELWNFREDRKATLE 620
Query: 146 EAASYLLKQWKTHK 159
E + LL+QW K
Sbjct: 621 EGVNSLLEQWNQAK 634
>AT1G80790.1 | chr1:30360280-30362856 FORWARD LENGTH=635
Length = 634
Score = 120 bits (302), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 63/154 (40%), Positives = 97/154 (62%), Gaps = 3/154 (1%)
Query: 11 EDHSLAVQGLEKMAGVRSIIGVKRMGELDQKAFYNACKNKMP---NNKMKLALVCSKWED 67
E + L ++ R+II VKRMGEL++K F AC+ + +++ A++CSKW++
Sbjct: 479 EARKFLITELRELVSDRNIIRVKRMGELEEKPFMTACRQRCTVEEEAQVQYAMLCSKWQE 538
Query: 68 EITKPEWHPFKVIETAGQTKEIIKEDDGKLQALRAQYGDEACNVVVKALVEMNEYNPSGM 127
++ W PFK + T + KE++ E+D +++ LR ++G+E N V AL E+NE+NPSG
Sbjct: 539 KVKDSAWQPFKHVGTGDRKKEVVDEEDEEIKKLREEWGEEVKNAVKTALEELNEFNPSGR 598
Query: 128 YPVPELWNFKQNRSAPMPEAASYLLKQWKTHKKR 161
Y VPELWN KQ R A + E Y+ +Q KT K+R
Sbjct: 599 YSVPELWNSKQGRKATLKEVIDYITQQVKTLKRR 632
>AT3G29375.1 | chr3:11280151-11281829 FORWARD LENGTH=356
Length = 355
Score = 117 bits (294), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 58/151 (38%), Positives = 89/151 (58%), Gaps = 3/151 (1%)
Query: 11 EDHSLAVQGLEKMAGVRSIIGVKRMGELDQKAFYNACKNKMPNNKMKLALVCSKWEDEIT 70
E L + + + R+ I VKRMG LD + F A K ++ N + V ++WE+ +
Sbjct: 201 EAQKLLISQMRDLTDDRTTIRVKRMGHLDVEPFVKASKRRLTGNDTE---VYAEWEENLR 257
Query: 71 KPEWHPFKVIETAGQTKEIIKEDDGKLQALRAQYGDEACNVVVKALVEMNEYNPSGMYPV 130
P W PFK +ET KE++ E+D KL+ LR ++G+E N V AL E+NE+NPSG + V
Sbjct: 258 DPHWQPFKRVETGNIVKEVVDEEDEKLKNLREEWGEEVMNAVKTALEEVNEFNPSGRHVV 317
Query: 131 PELWNFKQNRSAPMPEAASYLLKQWKTHKKR 161
P LWN +Q R A + E +++ + KT K++
Sbjct: 318 PTLWNSEQGRVATLREVIAHMTHEIKTLKRK 348
>AT3G48670.1 | chr3:18031240-18033615 FORWARD LENGTH=648
Length = 647
Score = 108 bits (271), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 57/136 (41%), Positives = 80/136 (58%), Gaps = 4/136 (2%)
Query: 30 IGVKRMGELDQKAFYNACKNKMPNNKM--KLALVCSKWEDEITKPEWHPFKVIETAGQTK 87
IGVKRMGEL K F +A + K + + V WE + +WHPFK ++ + +
Sbjct: 508 IGVKRMGELVTKPFVDAMQQKYCQQDVEDRAVEVLQLWEHYLKDSDWHPFKRVKLENEDR 567
Query: 88 EI--IKEDDGKLQALRAQYGDEACNVVVKALVEMNEYNPSGMYPVPELWNFKQNRSAPMP 145
E+ I + D KL+ L+A GD N V KAL+E+NEYNPSG Y ELWNFK ++ A +
Sbjct: 568 EVEVIDDRDEKLRELKADLGDGPYNAVTKALLEINEYNPSGRYITTELWNFKADKKATLE 627
Query: 146 EAASYLLKQWKTHKKR 161
E + LL QW+ K++
Sbjct: 628 EGVTCLLDQWEKAKRK 643
>AT4G01780.1 | chr4:767310-769246 FORWARD LENGTH=473
Length = 472
Score = 105 bits (262), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 54/131 (41%), Positives = 78/131 (59%), Gaps = 4/131 (3%)
Query: 35 MGELDQKAFYNACKNKMPNNKM--KLALVCSKWEDEITKPEWHPFKVIETAGQTKEI--I 90
MGEL +K F +A + K + + V WE I P+WHP+K ++ Q +E+ I
Sbjct: 338 MGELVRKPFVDAMQQKYCQEDVEDRAVEVLQLWEHYINDPDWHPYKRVKLENQDREVEVI 397
Query: 91 KEDDGKLQALRAQYGDEACNVVVKALVEMNEYNPSGMYPVPELWNFKQNRSAPMPEAASY 150
+ D KL+ L+A GD N V KAL+E+NEYNPSG Y ELWNFK+++ A + E +
Sbjct: 398 DDRDEKLRELKADLGDGPYNAVTKALLEINEYNPSGRYITTELWNFKEDKRATLEEGVTC 457
Query: 151 LLKQWKTHKKR 161
LL QW+ K++
Sbjct: 458 LLDQWEKAKRK 468
>AT5G59390.1 | chr5:23954934-23957151 FORWARD LENGTH=562
Length = 561
Score = 105 bits (261), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/131 (41%), Positives = 78/131 (59%), Gaps = 10/131 (7%)
Query: 30 IGVKRMGELDQKAF-------YNACKNKMPNNKMKLALVCSKWEDEITKPEWHPFKVIET 82
I VKRMG+L+ F + ++K N MKL CS WE I +W PF+V E+
Sbjct: 417 IRVKRMGQLNPAPFLPAVMKKHKVTQSKAENKAMKL---CSVWEANIGDVQWTPFRVDES 473
Query: 83 AGQTKEIIKEDDGKLQALRAQYGDEACNVVVKALVEMNEYNPSGMYPVPELWNFKQNRSA 142
G K ++ E+D KL+ L+ QYG+E N VV+ +E+ E+N SG Y + ELWN+++NR A
Sbjct: 474 DGTPKRVVDENDEKLRTLKNQYGEEVYNEVVRTKLEIEEHNASGSYVILELWNYEENRKA 533
Query: 143 PMPEAASYLLK 153
M EA +LK
Sbjct: 534 TMEEATDVMLK 544
>AT4G01180.1 | chr4:501287-503394 REVERSE LENGTH=555
Length = 554
Score = 91.7 bits (226), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 75/138 (54%), Gaps = 19/138 (13%)
Query: 30 IGVKRMGELDQKAFYNACKNKMPNNKMKLALVCSKWEDEITKPEWHPFKVIETAGQTKE- 88
I VK MGEL+ F A NK K ++CS W EI +W PF+V E+ G K+
Sbjct: 407 IRVKIMGELNPAPFLPAVMNKH-----KAMMLCSVWAAEIGDVQWTPFRVDESDGTPKQK 461
Query: 89 -------------IIKEDDGKLQALRAQYGDEACNVVVKALVEMNEYNPSGMYPVPELWN 135
++ E+D KL+ L+ QYG+E + VV+A +EM E+N SG Y ELWN
Sbjct: 462 LHISQHSKCEMQRVVDENDEKLRMLKNQYGEEVYSEVVRAKLEMEEHNASGSYETEELWN 521
Query: 136 FKQNRSAPMPEAASYLLK 153
+++NR A + E +LK
Sbjct: 522 YEENRKATIEEITDVMLK 539
>AT2G16490.1 | chr2:7146000-7147296 REVERSE LENGTH=180
Length = 179
Score = 56.2 bits (134), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 45/74 (60%)
Query: 88 EIIKEDDGKLQALRAQYGDEACNVVVKALVEMNEYNPSGMYPVPELWNFKQNRSAPMPEA 147
+++ E+ L+ L+ ++G++ N + + +M+EYN G YP PELWNFK+ + + E
Sbjct: 74 DLVNEEYEPLKKLKEKWGEDVHNTLKITIKDMDEYNACGKYPTPELWNFKKKLKSTLKEV 133
Query: 148 ASYLLKQWKTHKKR 161
+LL K+ K++
Sbjct: 134 IKFLLNDIKSLKRQ 147
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.315 0.130 0.391
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 3,802,462
Number of extensions: 151429
Number of successful extensions: 407
Number of sequences better than 1.0e-05: 11
Number of HSP's gapped: 395
Number of HSP's successfully gapped: 11
Length of query: 163
Length of database: 11,106,569
Length adjustment: 91
Effective length of query: 72
Effective length of database: 8,611,713
Effective search space: 620043336
Effective search space used: 620043336
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 107 (45.8 bits)