BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0583800 Os03g0583800|AK064786
(358 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G52870.2 | chr1:19685856-19687678 FORWARD LENGTH=367 407 e-114
AT4G03410.2 | chr4:1501907-1503503 FORWARD LENGTH=362 398 e-111
AT4G33905.1 | chr4:16254065-16255592 REVERSE LENGTH=262 76 3e-14
AT5G43140.1 | chr5:17321570-17323224 FORWARD LENGTH=255 74 2e-13
AT2G14860.1 | chr2:6387820-6389563 REVERSE LENGTH=253 73 2e-13
AT4G14305.1 | chr4:8235335-8236605 REVERSE LENGTH=186 61 8e-10
AT3G24570.1 | chr3:8966675-8968530 REVERSE LENGTH=236 57 1e-08
AT5G19750.1 | chr5:6677124-6679127 FORWARD LENGTH=289 54 1e-07
AT4G04470.1 | chr4:2227963-2229226 REVERSE LENGTH=191 50 1e-06
>AT1G52870.2 | chr1:19685856-19687678 FORWARD LENGTH=367
Length = 366
Score = 407 bits (1047), Expect = e-114, Method: Compositional matrix adjust.
Identities = 187/224 (83%), Positives = 201/224 (89%)
Query: 119 NKMLDRGINTAIVLGASTYALTKLLTVDHDYWHGWTIFEILRYMPEHNWSAYEEALKTNP 178
KM+DR IN IVL A +YA+TKLLT+DHDYWHGWT+FEILRY P+HNW AYEEALK NP
Sbjct: 122 EKMIDRTINATIVLAAGSYAITKLLTIDHDYWHGWTLFEILRYAPQHNWIAYEEALKQNP 181
Query: 179 VLAKMMISGVVYSLGDWIAQCYEGKPIFEFDRARMFRSGLVGFTLHGSLSHYYYHFCEAL 238
VLAKM+ISGVVYS+GDWIAQCYEGKP+FE DRAR RSGLVGFTLHGSLSH+YY FCE L
Sbjct: 182 VLAKMVISGVVYSVGDWIAQCYEGKPLFEIDRARTLRSGLVGFTLHGSLSHFYYQFCEEL 241
Query: 239 FPFKDWWVVPAKVVFDQTAWSAIWNSIYFVVLGFLRLESPATISSELKSTFWPMLTAGWK 298
FPF+DWWVVP KV FDQT WSAIWNSIYF VLGFLR ESP +I ELK+TF PMLTAGWK
Sbjct: 242 FPFQDWWVVPVKVAFDQTVWSAIWNSIYFTVLGFLRFESPISIFKELKATFLPMLTAGWK 301
Query: 299 LWPFAHLVTYGLVPVEQRLLWVDCVELIWVTILSTYSNEKSEAR 342
LWPFAHL+TYGLVPVEQRLLWVDCVELIWVTILSTYSNEKSEAR
Sbjct: 302 LWPFAHLITYGLVPVEQRLLWVDCVELIWVTILSTYSNEKSEAR 345
>AT4G03410.2 | chr4:1501907-1503503 FORWARD LENGTH=362
Length = 361
Score = 398 bits (1023), Expect = e-111, Method: Compositional matrix adjust.
Identities = 179/224 (79%), Positives = 202/224 (90%)
Query: 119 NKMLDRGINTAIVLGASTYALTKLLTVDHDYWHGWTIFEILRYMPEHNWSAYEEALKTNP 178
++++ RGIN AIVL A T A+TKLLT+DHDYW GWT++EILRY PEHNW AYE+ LKTNP
Sbjct: 80 DRLMSRGINAAIVLAAGTVAVTKLLTIDHDYWQGWTLYEILRYAPEHNWFAYEQILKTNP 139
Query: 179 VLAKMMISGVVYSLGDWIAQCYEGKPIFEFDRARMFRSGLVGFTLHGSLSHYYYHFCEAL 238
VLAKM ISG+VYSLGDWIAQCYEGKP+FEFDR R+ RSGLVGFTLHGSLSHYYY FCEAL
Sbjct: 140 VLAKMAISGIVYSLGDWIAQCYEGKPLFEFDRTRVLRSGLVGFTLHGSLSHYYYQFCEAL 199
Query: 239 FPFKDWWVVPAKVVFDQTAWSAIWNSIYFVVLGFLRLESPATISSELKSTFWPMLTAGWK 298
FPF++WWVVPAKV FDQT WSAIWNSIYF VLG LR +SPA I SE+K+TF PMLTAGWK
Sbjct: 200 FPFQEWWVVPAKVAFDQTVWSAIWNSIYFTVLGLLRFQSPADIFSEIKTTFLPMLTAGWK 259
Query: 299 LWPFAHLVTYGLVPVEQRLLWVDCVELIWVTILSTYSNEKSEAR 342
LWP AHLVTYG++PV+QRLLWVDC+ELIWVTILSTYSNEK+EA+
Sbjct: 260 LWPLAHLVTYGVIPVDQRLLWVDCIELIWVTILSTYSNEKAEAQ 303
>AT4G33905.1 | chr4:16254065-16255592 REVERSE LENGTH=262
Length = 261
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 76/170 (44%), Gaps = 1/170 (0%)
Query: 170 YEEALKTNPVLAKMMISGVVYSLGDWIAQCYEGKPIFEFDRARMFRSGLVGFTLHGSLSH 229
Y +K+ PVL K + S ++Y D +Q + +D R R G G + G H
Sbjct: 86 YLGMVKSRPVLTKSVTSSLIYIAADLSSQTIPQASVDSYDLVRTARMGGYGLLILGPTLH 145
Query: 230 YYYHFCEALFPFKDWWVVPAKVVFDQTAWSAIWNSIYFVVLGFLRLESPATISSELKSTF 289
Y+++ +LFP +D K+ QT + N ++F + L+ E+ + I + LK
Sbjct: 146 YWFNLMSSLFPKRDLITTFKKMAMGQTVYGPAMNVVFFSLNAALQGENGSEIVARLKRDL 205
Query: 290 WPMLTAGWKLWPFAHLVTYGLVPVEQRLLWVDCVELIWVTILSTYSNEKS 339
P + G WP +T+ PV + L + +W TI TY ++
Sbjct: 206 LPTMLNGVMYWPLCDFITFKFCPVYLQPLVSNSFSYLW-TIYITYMASRA 254
>AT5G43140.1 | chr5:17321570-17323224 FORWARD LENGTH=255
Length = 254
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 74/172 (43%), Gaps = 1/172 (0%)
Query: 170 YEEALKTNPVLAKMMISGVVYSLGDWIAQCYEGKPIFEFDRARMFRSGLVGFTLHGSLSH 229
Y L+++P + K + + V+Y D +Q +P FD R R G G H
Sbjct: 82 YLRKLESHPFMTKSITTSVIYMAADLTSQMITMEPTGSFDLIRTARMASFGLIFLGPSQH 141
Query: 230 YYYHFCEALFPFKDWWVVPAKVVFDQTAWSAIWNSIYFVVLGFLRLESPATISSELKSTF 289
++ + + P +D K++ Q + + N++++ L+ E+ I + LK
Sbjct: 142 LWFSYLSKILPKRDVLTTFKKIMMGQVLFGPVSNTVFYSYNAALQGENSEEIVARLKRDL 201
Query: 290 WPMLTAGWKLWPFAHLVTYGLVPVEQRLLWVDCVELIWVTILSTYSNEKSEA 341
P L G WP VT+ VPV + L IW TI TY +++A
Sbjct: 202 LPTLKNGLMYWPVCDFVTFKYVPVHLQPLMNSSCAYIW-TIYLTYMANQTKA 252
>AT2G14860.1 | chr2:6387820-6389563 REVERSE LENGTH=253
Length = 252
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 74/169 (43%)
Query: 170 YEEALKTNPVLAKMMISGVVYSLGDWIAQCYEGKPIFEFDRARMFRSGLVGFTLHGSLSH 229
Y +K++PV+ K + S ++Y D +Q +D R R G G + G H
Sbjct: 77 YLGMVKSHPVVTKSVTSSLIYIAADLSSQTIAKTSSESYDLVRTARMGGYGLFVLGPTLH 136
Query: 230 YYYHFCEALFPFKDWWVVPAKVVFDQTAWSAIWNSIYFVVLGFLRLESPATISSELKSTF 289
Y+++F LFP +D K+ QT + I I+F + L+ E + I + LK
Sbjct: 137 YWFNFMSRLFPKQDLITTFKKMAMGQTIYGPIMTVIFFSLNASLQGERGSVILARLKRDL 196
Query: 290 WPMLTAGWKLWPFAHLVTYGLVPVEQRLLWVDCVELIWVTILSTYSNEK 338
P L G WP +T+ PV + L + +W ++ +N +
Sbjct: 197 LPALFNGVMYWPLCDFITFRFFPVHLQPLVSNSFSYVWTIYMTYMANRE 245
>AT4G14305.1 | chr4:8235335-8236605 REVERSE LENGTH=186
Length = 185
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 73/173 (42%), Gaps = 4/173 (2%)
Query: 162 MPEHNWSAYEEALKTNPVLAKMMISGVVYSLGDWIAQCYEGKPIFEFDRARMFRSGLVGF 221
+ + W Y L+ +P+ K + +GV+ D IAQ G +F R + L GF
Sbjct: 4 LAKDAWRKYLIQLQAHPLRTKAITAGVLAGCSDAIAQKISGVKRIQFRRLLLLM--LYGF 61
Query: 222 TLHGSLSHYYYHFCEALFPFKDWWVVPAKVVFDQTAWSAIWNSIYFVVLGFLRLESP--A 279
G H+++ + +F K AK V + S+ WN+ F+ L +E
Sbjct: 62 AYGGPFGHFFHKLMDTIFKGKKGNSTVAKKVLLEQLTSSPWNNFLFMSYYGLVVEGRPWK 121
Query: 280 TISSELKSTFWPMLTAGWKLWPFAHLVTYGLVPVEQRLLWVDCVELIWVTILS 332
+ +L + + WK WP V Y VP++ R+L+ V W L+
Sbjct: 122 LVKHKLGKDYPTIQLTAWKFWPIVGWVNYQYVPLQFRVLFSSFVASCWSIFLN 174
>AT3G24570.1 | chr3:8966675-8968530 REVERSE LENGTH=236
Length = 235
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 82/210 (39%), Gaps = 35/210 (16%)
Query: 167 WSAYEEALKTNPVLAKMMISGVVYSLGDWIAQC--------------------------- 199
W Y+ L +PV +++ SG ++ GD AQ
Sbjct: 5 WRWYQRCLTVHPVKTQVISSGFLWGFGDVTAQYITHSTAKRRLLRLTETNKDADADAEIK 64
Query: 200 --YEGKPIFEFDRARMFRSGLVGFTLHGSLSHYYYHFCEALFPFKDWWV------VPAKV 251
++ F+ + R+ + + GF G + H++Y + K +V V AKV
Sbjct: 65 VKWKQDAEFKVNWKRVAITSMFGFGFVGPVGHFWYEGLDKFIKLKLRYVPKSTRFVAAKV 124
Query: 252 VFDQTAWSAIWNSIYFVVLGFLRLESPATISSELKSTFWPMLTAGWKLWPFAHLVTYGLV 311
D + + ++F +GF ++ A + LK F P L WP + + V
Sbjct: 125 AMDGLIFGPVDLLVFFTYMGFATGKNTAEVKEGLKRDFLPALALEGGAWPLLQIANFRYV 184
Query: 312 PVEQRLLWVDCVELIWVTILSTYSNEKSEA 341
PV+ +LL+V+ L+ LS +K A
Sbjct: 185 PVQYQLLYVNIFCLVDSAFLSWVEQQKDAA 214
>AT5G19750.1 | chr5:6677124-6679127 FORWARD LENGTH=289
Length = 288
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 77/173 (44%), Gaps = 2/173 (1%)
Query: 170 YEEALKTNPVLAKMMISGVVYSLGDWIAQCYEGKPIFEFDRARMFRSGLVGFTLHGSLSH 229
Y+ L +PVL K + + ++ +GD I Q K D+ R +G L G H
Sbjct: 118 YQALLSNSPVLTKAVTAALLNLVGDLICQLTINKTS-SLDKKRTLTFTFLGLGLVGPTLH 176
Query: 230 YYYHFCEALFPFKDWWVVPAKVVFDQTAWSAIWNSIYFVVLGFLRLESPATISSELKSTF 289
++Y + + +++ DQ ++ I+ ++ + L P+ + +L+ +
Sbjct: 177 FWYLYLSKVVTASGLSGAVIRLLLDQFVFAPIFVGVFLSAVVTLE-GKPSNVIPKLQQEW 235
Query: 290 WPMLTAGWKLWPFAHLVTYGLVPVEQRLLWVDCVELIWVTILSTYSNEKSEAR 342
+ A W+LW + + VP ++L + V L W ILS ++++ A+
Sbjct: 236 TGAMIANWQLWIPFQFLNFRFVPQNYQVLASNVVALAWNVILSFKAHKEVVAK 288
>AT4G04470.1 | chr4:2227963-2229226 REVERSE LENGTH=191
Length = 190
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 75/174 (43%), Gaps = 4/174 (2%)
Query: 170 YEEALKTNPVLAKMMISGVVYSLGDWIAQCYEGKPIFEFDRARMFRSGLVGFTLHGSLSH 229
Y L+ +P+ K + +GV+ + D ++Q G + R + GF G H
Sbjct: 14 YLSQLQQHPLRTKAITAGVLSGVSDVVSQKLSGIQKIQLRRVLLKVIFAGGFL--GPAGH 71
Query: 230 YYYHFCEALFP-FKDWWVVPAKVVFDQTAWSAIWNSIYFVVLGFLRLESPATISSE-LKS 287
+++ + + F KD V KV+ +Q S + + ++ + G + +P T+ E +K
Sbjct: 72 FFHTYLDKFFKGKKDTQTVAKKVILEQLTLSPLNHLLFMIYYGVVIERTPWTLVRERIKK 131
Query: 288 TFWPMLTAGWKLWPFAHLVTYGLVPVEQRLLWVDCVELIWVTILSTYSNEKSEA 341
T+ + W +P + Y VP+ R++ V W L+ + + A
Sbjct: 132 TYPTVQLTAWTFFPVVGWINYKYVPLHFRVILHSLVAFFWGIFLTLRARSMTLA 185
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.322 0.138 0.462
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 6,523,414
Number of extensions: 245717
Number of successful extensions: 436
Number of sequences better than 1.0e-05: 9
Number of HSP's gapped: 434
Number of HSP's successfully gapped: 9
Length of query: 358
Length of database: 11,106,569
Length adjustment: 100
Effective length of query: 258
Effective length of database: 8,364,969
Effective search space: 2158162002
Effective search space used: 2158162002
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 112 (47.8 bits)