BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0448600 Os03g0448600|AK111867
(343 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G19590.1 | chr3:6805798-6808374 FORWARD LENGTH=341 597 e-171
AT1G49910.1 | chr1:18479025-18481271 FORWARD LENGTH=340 587 e-168
AT1G69400.1 | chr1:26087027-26088806 FORWARD LENGTH=315 221 5e-58
AT1G80670.1 | chr1:30320809-30323543 REVERSE LENGTH=350 211 6e-55
AT1G15850.1 | chr1:5453245-5454088 REVERSE LENGTH=141 64 1e-10
AT1G18080.1 | chr1:6222325-6223901 FORWARD LENGTH=328 52 3e-07
AT3G49660.1 | chr3:18413690-18415223 FORWARD LENGTH=318 52 5e-07
>AT3G19590.1 | chr3:6805798-6808374 FORWARD LENGTH=341
Length = 340
Score = 597 bits (1538), Expect = e-171, Method: Compositional matrix adjust.
Identities = 276/331 (83%), Positives = 303/331 (91%)
Query: 13 SGKELANPPTDGISNLRFSNHSDHLLVSSWDKTVRLYDADANVLKGEFVHAGAVLDCCFH 72
+G+EL+NPP+DGISNLRFSN+SDHLLVSSWDK VRLYD N LKGEF+H GAVLDCCFH
Sbjct: 8 AGRELSNPPSDGISNLRFSNNSDHLLVSSWDKRVRLYDVSTNSLKGEFLHGGAVLDCCFH 67
Query: 73 DDSSGFSAGADHTVRRLVFGSAKEDLLGRHDAPVRCVEYSYAAGQVITGSWDKTIKCWDP 132
DD SGFS GAD+ VRR+VF KED+LG HD VRCVEYSYAAGQVITGSWDKT+KCWDP
Sbjct: 68 DDFSGFSVGADYKVRRIVFNVGKEDILGTHDKAVRCVEYSYAAGQVITGSWDKTVKCWDP 127
Query: 133 RGVSGPERTLVGTYAQPERVYSLSLVGNRLVVATAGRHVNIYDLRNMSQHEQKRDSSLKY 192
RG SGPERT VGTY QPERVYS+SLVG+RLVVATAGRHVNIYDLRNMSQ EQ+R+SSLKY
Sbjct: 128 RGASGPERTQVGTYLQPERVYSMSLVGHRLVVATAGRHVNIYDLRNMSQPEQRRESSLKY 187
Query: 193 QTRCVRCFPNGTGYALSSVEGRVSMEFFDLSESAQSKKYAFKCHRKSEAGRDTVYPVNAI 252
QTRCVRC+PNGTGYALSSVEGRV+MEFFDLSE+AQ+KKYAFKCHRKSEAGRD VYPVN+I
Sbjct: 188 QTRCVRCYPNGTGYALSSVEGRVAMEFFDLSEAAQAKKYAFKCHRKSEAGRDIVYPVNSI 247
Query: 253 AFHPIYGTFATGGCDGFVNVWDGINKKRLYQYSKYASSIAALSFSKDGHLLAVASSYTYE 312
AFHPIYGTFATGGCDGFVN+WDG NKKRLYQYSKY +SI+ALSFS+DG LLAVASSYT+E
Sbjct: 248 AFHPIYGTFATGGCDGFVNIWDGNNKKRLYQYSKYPTSISALSFSRDGQLLAVASSYTFE 307
Query: 313 EGEKSHEPDAIFIRSVNEVEVKPKPKALAAP 343
EGEKS EP+AIF+RSVNE+EVKPKPK P
Sbjct: 308 EGEKSQEPEAIFVRSVNEIEVKPKPKVYPNP 338
>AT1G49910.1 | chr1:18479025-18481271 FORWARD LENGTH=340
Length = 339
Score = 587 bits (1514), Expect = e-168, Method: Compositional matrix adjust.
Identities = 274/330 (83%), Positives = 302/330 (91%)
Query: 14 GKELANPPTDGISNLRFSNHSDHLLVSSWDKTVRLYDADANVLKGEFVHAGAVLDCCFHD 73
G+EL+NPP+DGISNLRFSN+SDHLLVSSWDK+VRLYDA+ ++++GEF H GAVLDCCFHD
Sbjct: 8 GRELSNPPSDGISNLRFSNNSDHLLVSSWDKSVRLYDANGDLMRGEFKHGGAVLDCCFHD 67
Query: 74 DSSGFSAGADHTVRRLVFGSAKEDLLGRHDAPVRCVEYSYAAGQVITGSWDKTIKCWDPR 133
DSSGFS AD VRR+ F + KED+LG H+ PVRCVEYSYAAGQVITGSWDKTIKCWDPR
Sbjct: 68 DSSGFSVCADTKVRRIDFNAGKEDVLGTHEKPVRCVEYSYAAGQVITGSWDKTIKCWDPR 127
Query: 134 GVSGPERTLVGTYAQPERVYSLSLVGNRLVVATAGRHVNIYDLRNMSQHEQKRDSSLKYQ 193
G SG ERT +GTY QPERV SLSLVGNRLVVATAGRHVNIYDLRNMSQ EQ+R+SSLKYQ
Sbjct: 128 GASGTERTQIGTYMQPERVNSLSLVGNRLVVATAGRHVNIYDLRNMSQPEQRRESSLKYQ 187
Query: 194 TRCVRCFPNGTGYALSSVEGRVSMEFFDLSESAQSKKYAFKCHRKSEAGRDTVYPVNAIA 253
TRCVRC+PNGTGYALSSVEGRVSMEFFDLSE+AQ+KKYAFKCHRKSE GRD VYPVNAIA
Sbjct: 188 TRCVRCYPNGTGYALSSVEGRVSMEFFDLSEAAQAKKYAFKCHRKSEDGRDIVYPVNAIA 247
Query: 254 FHPIYGTFATGGCDGFVNVWDGINKKRLYQYSKYASSIAALSFSKDGHLLAVASSYTYEE 313
FHPIYGTFA+GGCDGFVN+WDG NKKRLYQYSKY +SIAALSFS+DG LLAVASSYT+EE
Sbjct: 248 FHPIYGTFASGGCDGFVNIWDGNNKKRLYQYSKYPTSIAALSFSRDGGLLAVASSYTFEE 307
Query: 314 GEKSHEPDAIFIRSVNEVEVKPKPKALAAP 343
G+K HEPDAIF+RSVNE+EVKPKPK P
Sbjct: 308 GDKPHEPDAIFVRSVNEIEVKPKPKVYPNP 337
>AT1G69400.1 | chr1:26087027-26088806 FORWARD LENGTH=315
Length = 314
Score = 221 bits (562), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 124/315 (39%), Positives = 189/315 (60%), Gaps = 7/315 (2%)
Query: 12 GSGKELANPPTDGISNLRFSNHSDHLLVSSWDKTVRLYDADANVLKGEFVHAGAVLDCCF 71
G E NP D +S LRFS S++LLV+SWD +RLYD +++ L E A+LDCCF
Sbjct: 3 GDRLEFENPIEDAVSRLRFSPQSNNLLVASWDSYLRLYDVESSSLSLELNSQAALLDCCF 62
Query: 72 HDDSSGFSAGADHTVRRLVFGSAKEDLLGRHDAPVRCVEYSYAAGQVITGSWDKTIKCWD 131
++S+ F++G+D +RR + D +GRHD + YSY G+VI+ +D+ IK WD
Sbjct: 63 ENESTSFTSGSDGFIRRYDLNAGTVDTIGRHDDISTSIVYSYEKGEVISTGFDEKIKFWD 122
Query: 132 PRGVSGPERTLVGTYAQPERVYSLSLVGNRLVVATAGRHVNIYDLRNMSQHEQKRDSSLK 191
R +LV + V +++ GN LVV ++IYDLRN+ + Q S ++
Sbjct: 123 TR----QRESLVFSTDAGGAVGCVTVSGNNLVVCVDA-SMHIYDLRNLDEAFQSYASQVE 177
Query: 192 YQTRCVRCFPNGTGYALSSVEGRVSMEFFDLSESAQSKKYAFKCHRKSEAGRDTVYPVNA 251
RC+ P GYA+ SV+GRV+++F + S S++ KY+F+CH KS GR +NA
Sbjct: 178 VPIRCITSVPYSRGYAVGSVDGRVAVDFPNTSCSSE-IKYSFRCHPKSRNGRLDGVCINA 236
Query: 252 IAFHPI-YGTFATGGCDGFVNVWDGINKKRLYQYSKYASSIAALSFSKDGHLLAVASSYT 310
I F P GTF TG +G+V W+ +++RL + +Y++SIA+L+F G LLA+ASS+T
Sbjct: 237 IEFSPCGSGTFVTGDNEGYVISWNAKSRRRLNELPRYSNSIASLAFDHTGELLAIASSHT 296
Query: 311 YEEGEKSHEPDAIFI 325
Y++ ++ E +FI
Sbjct: 297 YQDAKEKEEAPQVFI 311
>AT1G80670.1 | chr1:30320809-30323543 REVERSE LENGTH=350
Length = 349
Score = 211 bits (536), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 122/335 (36%), Positives = 183/335 (54%), Gaps = 23/335 (6%)
Query: 16 ELANPPTDGISNLRFSNHSDHLLVSSWDKTVRLYDAD------ANVLKGEFVHAGAVLDC 69
E+ P D IS+L FS +D L+ +SWD VR ++ A+ K H VL
Sbjct: 19 EVTPSPADSISSLSFSPRADILVATSWDNQVRCWEISRSGASLASAPKASISHDQPVLCS 78
Query: 70 CFHDD-SSGFSAGADHTVRRLVFGSAKEDL-LGRHDAPVRCVEYSYAAGQVITGSWDKTI 127
+ DD ++ FS G D + S + + + H+ P+ + + + TGSWDKT+
Sbjct: 79 AWKDDGTTVFSGGCDKQAKMWPLLSGGQPVTVAMHEGPIAAMAWIPGMNLLATGSWDKTL 138
Query: 128 KCWDPRGVSGPERTLVGTYAQPERVYSLSLVGNRLVVATAGRHVNIYDLRNMSQHEQKRD 187
K WD R ++ V T P++ Y+LS+ +VV TA R++ +++L+N ++
Sbjct: 139 KYWDTR-----QQNPVHTQQLPDKCYTLSVKHPLMVVGTADRNLIVFNLQNPQTEFKRIQ 193
Query: 188 SSLKYQTRCVRCFPNGTGYALSSVEGRVSMEFFDLSESAQSKKYAFKCHRKSEAGRDTVY 247
S LKYQTRCV FP+ G+ + S+EGRV + D +S QSK + FKCHR G D +Y
Sbjct: 194 SPLKYQTRCVTAFPDQQGFLVGSIEGRVGVHHLD--DSQQSKNFTFKCHRD---GND-IY 247
Query: 248 PVNAIAFHPIYGTFATGGCDGFVNVWDGINKKRLYQYSKYASSIAALSFSKDGHLLAVAS 307
VN++ FHP++GTFAT G DG N WD +K+RL S+ I SF+ DG + A A+
Sbjct: 248 SVNSLNFHPVHGTFATAGSDGAFNFWDKDSKQRLKAMSRCNQPIPCSSFNHDGSIYAYAA 307
Query: 308 SYTYEEGEKSHEP----DAIFIRSVNEVEVKPKPK 338
Y + +G ++H P +IF+ E EVK KP+
Sbjct: 308 CYDWSKGAENHNPATAKSSIFLHLPQESEVKAKPR 342
>AT1G15850.1 | chr1:5453245-5454088 REVERSE LENGTH=141
Length = 140
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 62/121 (51%), Gaps = 8/121 (6%)
Query: 16 ELANPPTDGISNLRFSNHSDHLLVSSWDKTVRLYD---ADANVL---KGEFVHAGAVLDC 69
E+ P TD IS+L FS +D L+ +SWD VR ++ +D ++ K H VL
Sbjct: 20 EITPPATDSISSLSFSPKADILVATSWDCQVRCWEITRSDGSIASEPKVSMSHDQPVLCS 79
Query: 70 CFHDD-SSGFSAGADHTVRRL-VFGSAKEDLLGRHDAPVRCVEYSYAAGQVITGSWDKTI 127
+ DD ++ F+ G D + + A+ + HDAP + + ++TGSWDKT+
Sbjct: 80 AWKDDGTTVFTGGCDKQAKMWPLLSGAQPSTVAMHDAPFNQIAWIPGMNLLVTGSWDKTL 139
Query: 128 K 128
K
Sbjct: 140 K 140
>AT1G18080.1 | chr1:6222325-6223901 FORWARD LENGTH=328
Length = 327
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 111/256 (43%), Gaps = 34/256 (13%)
Query: 91 FGSAKEDLLGRHDAPVRCVEYSYAAGQVITGSWDKTIKCWD-PRGVSGPERTLVGTYAQP 149
+G A+ L G H V V S ++GSWD ++ WD GVS R VG + +
Sbjct: 52 YGVAQRRLTG-HSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVS--TRRFVG-HTKD 107
Query: 150 ERVYSLSLVGNRLVVATAGRHVNIYDLRNMSQH------EQKRDSSLKYQTRCVRCFPNG 203
+ SL ++V A+ R + +++ ++ E RD CVR PN
Sbjct: 108 VLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRD-----WVSCVRFSPNT 162
Query: 204 TGYALSSVEGRVSMEFFDLSESAQSKKYAFKCHRKSEAGRDTVYPVNAIAFHPIYGTFAT 263
+ S +++ ++LS C +S T Y V+ +A P A+
Sbjct: 163 LQPTIVSASWDKTVKVWNLSN----------CKLRSTLAGHTGY-VSTVAVSPDGSLCAS 211
Query: 264 GGCDGFVNVWDGINKKRLYQYSKYASSIAALSFSKDGHLLAVASSYTYEEGEKSHEPDAI 323
GG DG V +WD K+LY + S I AL FS + + L A+ E G K + ++
Sbjct: 212 GGKDGVVLLWDLAEGKKLYSL-EANSVIHALCFSPNRYWLCAAT----EHGIKIWDLESK 266
Query: 324 FIRSVNEVEVKPKPKA 339
I V +++V K +A
Sbjct: 267 SI--VEDLKVDLKAEA 280
>AT3G49660.1 | chr3:18413690-18415223 FORWARD LENGTH=318
Length = 317
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 108/254 (42%), Gaps = 16/254 (6%)
Query: 23 DGISNLRFSNHSDHLLVSSWDKTVRLYDADA-NVLKGEFVHAGAVLDCCFHDDSSGFSAG 81
+GIS++ FS+ + ++ +S DKT++L+D + +++K H F+ S+ +G
Sbjct: 72 NGISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSG 131
Query: 82 A-DHTVRRLVFGSAK-EDLLGRHDAPVRCVEYSYAAGQVITGSWDKTIKCWDPRGVSGPE 139
+ D TVR + K +L H PV V+++ +++ S+D + WD G
Sbjct: 132 SFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWD-SGTGHCV 190
Query: 140 RTLVGTYAQPERVYSLSLVGNRLVVATAGRHVNIYDLRNMSQHEQKRDSSLKYQTRCVRC 199
+TL+ P S G ++V T + ++++ + ++ + + Q
Sbjct: 191 KTLIDDENPPVSFVRFSPNGKFILVGTLDNTLRLWNISS-AKFLKTYTGHVNAQYCISSA 249
Query: 200 FPNGTGYALSSVEGRVSMEFFDLSESAQSKKYAFKCHRKSEAGRDTVYPVNAIAFHPIYG 259
F G + S + ++L SKK K +E V +A HP
Sbjct: 250 FSVTNGKRIVSGSEDNCVHMWEL----NSKKLLQKLEGHTET-------VMNVACHPTEN 298
Query: 260 TFATGGCDGFVNVW 273
A+G D V +W
Sbjct: 299 LIASGSLDKTVRIW 312
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.317 0.133 0.403
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 7,623,935
Number of extensions: 316152
Number of successful extensions: 1369
Number of sequences better than 1.0e-05: 9
Number of HSP's gapped: 1355
Number of HSP's successfully gapped: 10
Length of query: 343
Length of database: 11,106,569
Length adjustment: 99
Effective length of query: 244
Effective length of database: 8,392,385
Effective search space: 2047741940
Effective search space used: 2047741940
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 112 (47.8 bits)