BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os03g0432100 Os03g0432100|AK065739
         (796 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G15530.5  | chr4:8864828-8870748 REVERSE LENGTH=964           1291   0.0  

>AT4G15530.5 | chr4:8864828-8870748 REVERSE LENGTH=964
          Length = 963

 Score = 1291 bits (3340), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 611/796 (76%), Positives = 696/796 (87%), Gaps = 1/796 (0%)

Query: 1   MGAVLGDPRRPLLLSVRSGAAVSMPGMMDTVLNLGLNDHVVAGLAHRSGERFAYDSYRRF 60
           +GA L DP +PLLLSVRSGAA+SMPGMMDTVLNLGLND VV GLA +SGERFAYDS+RRF
Sbjct: 168 IGASLADPSKPLLLSVRSGAAISMPGMMDTVLNLGLNDQVVVGLAAKSGERFAYDSFRRF 227

Query: 61  LDMFGNVVMDIPHSLFEEKIEAMKAALGLRNDTELTARDLKELVAQYKNVYVEAKGEEFP 120
           LDMFG+VVM IPH+ FEEK+E MK   G++NDT+L+A DLKELV QYK+VY+EAKG+EFP
Sbjct: 228 LDMFGDVVMGIPHAKFEEKLERMKERKGVKNDTDLSAADLKELVEQYKSVYLEAKGQEFP 287

Query: 121 SDPKKQLHLSVLAVFNSWDSARAKKYRSINQITGLKGTAVNVQCMVFGNMGDTSGTGVLF 180
           SDPKKQL L++ AVF+SWDS RA KYRSINQITGLKGTAVN+QCMVFGNMGDTSGTGVLF
Sbjct: 288 SDPKKQLELAIEAVFDSWDSPRANKYRSINQITGLKGTAVNIQCMVFGNMGDTSGTGVLF 347

Query: 181 TRNPSTGERKLYGEFLVNAQGEDVVAGIRTPQDLDTMKDCMPEPYAELVENCKILESHYK 240
           TRNPSTGE+KLYGEFLVNAQGEDVVAGIRTP+DLDTMK  MPE YAELVENC ILE HYK
Sbjct: 348 TRNPSTGEKKLYGEFLVNAQGEDVVAGIRTPEDLDTMKRFMPEAYAELVENCNILERHYK 407

Query: 241 EMMDIEFTVQENRLWMLQCRTGKRTGKGAVKIAVDMVNEGLIDRRSAIKMVEPRHLDQLL 300
           +MMDIEFTVQE RLWMLQCR GKRTGKGAVKIAVDMV EGL+++ SAIKMVEP+HLDQLL
Sbjct: 408 DMMDIEFTVQEERLWMLQCRAGKRTGKGAVKIAVDMVGEGLVEKSSAIKMVEPQHLDQLL 467

Query: 301 HPQFESPSSYGDKVIATGLPASPGAAVGQIVFTADDAEAWHAQGKSVILVRTETSPEDVG 360
           HPQF  PS Y +KV+A GLPASPGAAVGQ+VFTA++AEAWH+QGK+VILVRTETSP+DVG
Sbjct: 468 HPQFHDPSGYREKVVAKGLPASPGAAVGQVVFTAEEAEAWHSQGKTVILVRTETSPDDVG 527

Query: 361 GMNAAAGILTARGGMTSHAAVVARGWGKCCVAGCSGIRVNDAEKVVLVADKVLCEGEWLS 420
           GM+AA GILTARGGMTSHAAVVARGWGKCC+AGCS IRV++  KV+L+ D  + EGEW+S
Sbjct: 528 GMHAAEGILTARGGMTSHAAVVARGWGKCCIAGCSEIRVDENHKVLLIGDLTINEGEWIS 587

Query: 421 LNGSTGEVILGKLPLSPPALSGDLGEFMSWVDEVKKLKVKANADTPADALTARNNGAEGI 480
           +NGSTGEVILGK  L+PPALS DL  FMSW D +++LKV ANADTP DA+ AR NGA+GI
Sbjct: 588 MNGSTGEVILGKQALAPPALSPDLETFMSWADAIRRLKVMANADTPEDAIAARKNGAQGI 647

Query: 481 GLCRTEHMFFSSDERIKAMRQMIMAETIEHRQIALDRLLPYQRLDFEGIFRAMDGLPVTI 540
           GLCRTEHMFF +D RIKA+R+MIMA T E R+ +LD LLPYQR DFEGIFRAMDGLPVTI
Sbjct: 648 GLCRTEHMFFGAD-RIKAVRKMIMAVTTEQRKASLDILLPYQRSDFEGIFRAMDGLPVTI 706

Query: 541 RLLDPPLHEFLPEGNVEDMVRLLSSGNVYTQEEILTRIEKLSEVNPMLGFRGCRLGISYP 600
           RLLDPPLHEFLPEG+++++V  L+      ++E+L+RIEKLSEVNPMLGFRGCRLGISYP
Sbjct: 707 RLLDPPLHEFLPEGDLDNIVHELAEETGVKEDEVLSRIEKLSEVNPMLGFRGCRLGISYP 766

Query: 601 ELTAMQARAIFEAAISMTEQGVKVFPEIMVPLIGTPQELAQQVDVIREVAEKVFANAETT 660
           ELT MQARAIFEAA SM +QGV V PEIMVPL+GTPQEL  QVDVIR+VA+KVFA    T
Sbjct: 767 ELTEMQARAIFEAAASMQDQGVTVIPEIMVPLVGTPQELGHQVDVIRKVAKKVFAEKGHT 826

Query: 661 ISYKIGSMIEVPRXXXXXXXXXXXXXXXSFGTNDLTQMTFGYSRDDVGKFLPTYLSKGIL 720
           +SYK+G+MIE+PR               SFGTNDLTQMTFGYSRDDVGKFLP YL+KGIL
Sbjct: 827 VSYKVGTMIEIPRAALIADEIAKEAEFFSFGTNDLTQMTFGYSRDDVGKFLPIYLAKGIL 886

Query: 721 QNDPFEVFDQKGVGELVKVAVERGRKARPDLEVGICGEHGGEPSSVAFFAKVGLNYVSCS 780
           Q+DPFEV DQ+GVG+L+K+A E+GR ARP L+VGICGEHGG+PSSV FFA+ GL+YVSCS
Sbjct: 887 QHDPFEVLDQQGVGQLIKMATEKGRAARPSLKVGICGEHGGDPSSVGFFAEAGLDYVSCS 946

Query: 781 PFRVPIARLAAAQVML 796
           PFRVPIARLAAAQV++
Sbjct: 947 PFRVPIARLAAAQVVV 962



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.319    0.136    0.396 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 16,652,285
Number of extensions: 703256
Number of successful extensions: 1693
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 1692
Number of HSP's successfully gapped: 1
Length of query: 796
Length of database: 11,106,569
Length adjustment: 107
Effective length of query: 689
Effective length of database: 8,173,057
Effective search space: 5631236273
Effective search space used: 5631236273
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 116 (49.3 bits)