BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0430400 Os03g0430400|AK059145
(454 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G00990.1 | chr4:427035-431535 FORWARD LENGTH=841 373 e-103
AT1G11950.1 | chr1:4034747-4038310 REVERSE LENGTH=876 230 1e-60
AT1G62310.1 | chr1:23036039-23039301 REVERSE LENGTH=884 226 2e-59
AT3G07610.3 | chr3:2426148-2432876 FORWARD LENGTH=1050 211 7e-55
AT1G09060.3 | chr1:2921235-2925254 REVERSE LENGTH=945 190 1e-48
AT4G21430.1 | chr4:11407835-11412159 REVERSE LENGTH=928 143 2e-34
>AT4G00990.1 | chr4:427035-431535 FORWARD LENGTH=841
Length = 840
Score = 373 bits (958), Expect = e-103, Method: Compositional matrix adjust.
Identities = 204/411 (49%), Positives = 260/411 (63%), Gaps = 23/411 (5%)
Query: 2 FFMGYMRGRRHPMTFWPEMLKLKDWPPSSMFDQRLPRHGAEFITALPFPEYTDPRYGPLN 61
FF GY+ GR H WPEMLKLKDWPPS +F++RLPRH AEFI ALPF +YTDP+ G LN
Sbjct: 450 FFEGYLEGRMH-KNGWPEMLKLKDWPPSDLFEKRLPRHNAEFIAALPFFDYTDPKSGILN 508
Query: 62 LAVRLPAGVLKPDLGPKTYIAYGCYEELGRGDSVTKLHCDMSDAVNILMHTAEVSYDTEQ 121
LA R P G LKPDLGPKTYIAYG +EEL RGDSVTKLHCD+SDAVN+L HTA+V +
Sbjct: 509 LATRFPEGSLKPDLGPKTYIAYGFHEELNRGDSVTKLHCDISDAVNVLTHTAKVEIPPVK 568
Query: 122 LDKIAKIKMKMREQDLHELFGVSESGAKGKADDEASKISCNMENKHTSNQSTKGLDINAL 181
I + K E L + SG +A + +ENK D+
Sbjct: 569 YQNIKVHQKKYAEAMLQKQ---QYSGQVKEASE--------LENKSMKEVDESKKDLKDK 617
Query: 182 PPDDSGSDIGDKPSFCQSEVESELTQCSKHNHEVNSSVKMHAGAHCTSDNQGYIDRSGFK 241
++ S+ +PS E+E SK ++ +V S + +D K
Sbjct: 618 AANEEQSNNSSRPS---GSGEAEKVIISKEDNPTQPAVSTSV----ESIQEQKLD--APK 668
Query: 242 RKDSDCSDQQKT--GGALWDIFRREDSEKLQDYLRKHASEFRHIHCNPVKNVSHPIHDQT 299
D + +++ K GGA+WDIFRRED KL +L++H EFRH + P+++V HPIHDQT
Sbjct: 669 ETDGNTNERSKAVHGGAVWDIFRREDVPKLIQFLKRHEHEFRHFNNEPLESVIHPIHDQT 728
Query: 300 FYLTVEHKRKLKEEHGVEPWTFEQKLGDAVFIPAGCPHQVRNLKSCIKVALDFVSPENVG 359
+L+ K++LKEE +EPWTFEQ LG+AVFIPAGCPHQVRN +SCIKVALDFV+PE+V
Sbjct: 729 MFLSDSQKKQLKEEFDIEPWTFEQHLGEAVFIPAGCPHQVRNRQSCIKVALDFVAPESVE 788
Query: 360 ECVKLTGEFRRLPSDHRAKEDKLEIKKIALNALKEVVNFLDPLPKGSKNRD 410
EC++LT EFRRLP DH + EDKLE+KKIAL A + + L + S+ D
Sbjct: 789 ECLRLTQEFRRLPKDHSSSEDKLELKKIALYAASSAIREVKGLMQSSRRSD 839
>AT1G11950.1 | chr1:4034747-4038310 REVERSE LENGTH=876
Length = 875
Score = 230 bits (586), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 105/152 (69%), Positives = 126/152 (82%), Gaps = 4/152 (2%)
Query: 252 KTGGALWDIFRREDSEKLQDYLRKHASEFRHIHCNPVKNVSHPIHDQTFYLTVEHKRKLK 311
+T GALWDIF+RED KL++YLRKH EFRH +C+ V V HPIHDQ+++LTVEHKRKLK
Sbjct: 720 ETSGALWDIFKREDVPKLEEYLRKHCIEFRHTYCSRVTKVYHPIHDQSYFLTVEHKRKLK 779
Query: 312 EEHGVEPWTFEQKLGDAVFIPAGCPHQVRNLKSCIKVALDFVSPENVGECVKLTGEFRRL 371
E G+EPWTF QKLG+AVFIPAGCPHQVRNLKSC KVA+DFVSPEN+ EC++LT EFR+L
Sbjct: 780 AEFGIEPWTFVQKLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPENIDECLRLTDEFRQL 839
Query: 372 PSDHRAKEDKLEIKKIAL----NALKEVVNFL 399
P +H+A+EDKLEIKK+ + ALKEV L
Sbjct: 840 PKNHKAREDKLEIKKMVIYAVEQALKEVETLL 871
Score = 201 bits (511), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 94/139 (67%), Positives = 109/139 (78%), Gaps = 1/139 (0%)
Query: 2 FFMGYMRGRRHPMTFWPEMLKLKDWPPSSMFDQRLPRHGAEFITALPFPEYTDPRYGPLN 61
FF GY +GR + FWPEMLKLKDWPPS F+ LPRH EFI+ALPF EY+DPR G LN
Sbjct: 562 FFEGYSKGRTYE-NFWPEMLKLKDWPPSDKFENLLPRHCDEFISALPFQEYSDPRSGILN 620
Query: 62 LAVRLPAGVLKPDLGPKTYIAYGCYEELGRGDSVTKLHCDMSDAVNILMHTAEVSYDTEQ 121
+A +LP G+LKPDLGPKTY+AYG +ELGRGDSVTKLHCDMSDAVNILMHTAEV+ EQ
Sbjct: 621 IATKLPEGLLKPDLGPKTYVAYGTSDELGRGDSVTKLHCDMSDAVNILMHTAEVTLSEEQ 680
Query: 122 LDKIAKIKMKMREQDLHEL 140
IA +K K ++Q+ EL
Sbjct: 681 RSAIADLKQKHKQQNEKEL 699
>AT1G62310.1 | chr1:23036039-23039301 REVERSE LENGTH=884
Length = 883
Score = 226 bits (576), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 99/142 (69%), Positives = 122/142 (85%)
Query: 248 SDQQKTGGALWDIFRREDSEKLQDYLRKHASEFRHIHCNPVKNVSHPIHDQTFYLTVEHK 307
++ ++TG ALWDIFRRED KL++YLRKH EFRH +C+PV V HPIHDQ+ YLT+EHK
Sbjct: 742 NENEETGSALWDIFRREDVPKLEEYLRKHCKEFRHTYCSPVTKVYHPIHDQSCYLTLEHK 801
Query: 308 RKLKEEHGVEPWTFEQKLGDAVFIPAGCPHQVRNLKSCIKVALDFVSPENVGECVKLTGE 367
RKLK E+G+EPWTF QKLG+AVFIPAGCPHQVRNLKSC KVA+DFVSPEN+ EC++LT E
Sbjct: 802 RKLKAEYGIEPWTFVQKLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPENIHECLRLTEE 861
Query: 368 FRRLPSDHRAKEDKLEIKKIAL 389
FR+LP +H+A+EDKLE ++L
Sbjct: 862 FRQLPKNHKAREDKLEASLLSL 883
Score = 192 bits (488), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 89/135 (65%), Positives = 104/135 (77%), Gaps = 1/135 (0%)
Query: 2 FFMGYMRGRRHPMTFWPEMLKLKDWPPSSMFDQRLPRHGAEFITALPFPEYTDPRYGPLN 61
FF GY +GR + FWPEMLKLKDWPPS F+ LPRH EFI+ALPF EY+DPR G LN
Sbjct: 580 FFEGYSKGRTYE-NFWPEMLKLKDWPPSDKFEDLLPRHCDEFISALPFQEYSDPRTGILN 638
Query: 62 LAVRLPAGVLKPDLGPKTYIAYGCYEELGRGDSVTKLHCDMSDAVNILMHTAEVSYDTEQ 121
+A +LP G +KPDLGPKTYIAYG +ELGRGDSVTKLHCDMSDAVNIL HTAEV+ EQ
Sbjct: 639 IATKLPEGFIKPDLGPKTYIAYGIPDELGRGDSVTKLHCDMSDAVNILTHTAEVTLSQEQ 698
Query: 122 LDKIAKIKMKMREQD 136
+ + +K K + Q+
Sbjct: 699 ISSVKALKQKHKLQN 713
>AT3G07610.3 | chr3:2426148-2432876 FORWARD LENGTH=1050
Length = 1049
Score = 211 bits (537), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 97/145 (66%), Positives = 115/145 (79%)
Query: 255 GALWDIFRREDSEKLQDYLRKHASEFRHIHCNPVKNVSHPIHDQTFYLTVEHKRKLKEEH 314
GALWDIFRRED KL+ Y+ KH EFRH++C PV V HPIHDQ FYLT H KLKEE+
Sbjct: 768 GALWDIFRREDIPKLESYIEKHHKEFRHLYCCPVSQVVHPIHDQNFYLTRYHIMKLKEEY 827
Query: 315 GVEPWTFEQKLGDAVFIPAGCPHQVRNLKSCIKVALDFVSPENVGECVKLTGEFRRLPSD 374
G+EPWTF QKLGDAV IP GCPHQVRNLKSC KVALDFVSPENV EC++LT ++R LP +
Sbjct: 828 GIEPWTFNQKLGDAVLIPVGCPHQVRNLKSCNKVALDFVSPENVSECLRLTKQYRLLPPN 887
Query: 375 HRAKEDKLEIKKIALNALKEVVNFL 399
H AKEDKL +KK+ ++A+ + + L
Sbjct: 888 HFAKEDKLGVKKMIVHAVDKALRDL 912
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 77/159 (48%), Positives = 94/159 (59%), Gaps = 20/159 (12%)
Query: 2 FFMGYMRGRRHPMTFWPEMLKLKDWPPSSMFDQRLPRHGAEFITALPFPEYTDPRYGPLN 61
FF GY GR M WP +LKLKDWPP+ +F LPRH EF+ +LP YT P GPLN
Sbjct: 583 FFTGYTDGRYDRMG-WPLVLKLKDWPPAKVFKDNLPRHAEEFLCSLPLKHYTHPVNGPLN 641
Query: 62 LAVRLPAGVLKPDLGPKTYIAYGCYEELGRGDSVTKLHCDMSDA---------------V 106
LAV+LP LKPD+GPKTY+A G +ELGRGDSVTKLHCDMSDA
Sbjct: 642 LAVKLPQNCLKPDMGPKTYVASGFAQELGRGDSVTKLHCDMSDADLWTKLYPFNVSPSIA 701
Query: 107 NILMHTAEVSYDTEQLDK----IAKIKMKMREQDLHELF 141
+++H + + + I +K K EQDL EL+
Sbjct: 702 FLVLHRPGIRFLVLLMPNMQPGIGNLKKKHAEQDLKELY 740
>AT1G09060.3 | chr1:2921235-2925254 REVERSE LENGTH=945
Length = 944
Score = 190 bits (483), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 143/405 (35%), Positives = 209/405 (51%), Gaps = 68/405 (16%)
Query: 2 FFMGYMRGRRHPMTFWPEMLKLKDWPPSSMFDQRLPRHGAEFITALPFPEYTDPRYGPLN 61
F Y G+ T P + KLKDWP S ++ + EFI + PF EY PR G LN
Sbjct: 569 FTRAYKDGKNQE-TGLPLLWKLKDWPSPSASEEFIFYQRPEFIRSFPFLEYIHPRLGLLN 627
Query: 62 LAVRLPAGVLKPDLGPKTYIAYGCYEELGRGDSVTKLHCDMSDAVNILMHTAEVSYDTEQ 121
+A +LP L+ D GPK Y++ G Y+E+ GDS+T +H +M D V +L+HT+E +
Sbjct: 628 VAAKLPHYSLQNDSGPKIYVSCGTYQEISAGDSLTGIHYNMRDMVYLLVHTSEET----T 683
Query: 122 LDKIAKIKMKMREQDLHELFGVSESGAKGKADDEASKISCNMENKHTSNQSTKGLDINAL 181
+++ K K E D K+S N E+ + Q + +++ L
Sbjct: 684 FERVRKTKPVPEEPD--------------------QKMSEN-ESLLSPEQKLRDGELHDL 722
Query: 182 PPDDSGSDIGDKPSFCQSEVESELTQCSKHNHEVNSSVKMHAGAHCTSDNQGYIDRSGFK 241
+G+ S ++E E LT ++ E +++ + CTS G F+
Sbjct: 723 -------SLGEA-SMEKNEPELALTVNPENLTENGDNME----SSCTSSCAGGAQWDVFR 770
Query: 242 RKDSDCSDQQKTGGALWDIFRREDSEKLQDYLRKHASEFRHIHCNPVKNVSHPIHDQTFY 301
R+D K G L F++ D+ + ++F VS P+++ F
Sbjct: 771 RQDV-----PKLSGYLQRTFQKPDNIQ---------TDF----------VSRPLYEGLF- 805
Query: 302 LTVEHKRKLKEEHGVEPWTFEQKLGDAVFIPAGCPHQVRNLKSCIKVALDFVSPENVGEC 361
L HKR+L++E GVEPWTFEQ G+A+FIPAGCP Q+ NL+S I+VALDF+ PE+VGE
Sbjct: 806 LNEHHKRQLRDEFGVEPWTFEQHRGEAIFIPAGCPFQITNLQSNIQVALDFLCPESVGES 865
Query: 362 VKLTGEFRRLPSDHRAKEDKLEIKKIAL----NALKEVVNF-LDP 401
+L E R LP+DH AK LEI KI+L +A+KEV LDP
Sbjct: 866 ARLAEEIRCLPNDHEAKLQILEIGKISLYAASSAIKEVQKLVLDP 910
>AT4G21430.1 | chr4:11407835-11412159 REVERSE LENGTH=928
Length = 927
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 64/144 (44%), Positives = 100/144 (69%), Gaps = 1/144 (0%)
Query: 253 TGGALWDIFRREDSEKLQDYLRKHASEFRHIHCNPVKNVSHPIHDQTFYLTVEHKRKLKE 312
T GA WD+F+++D KL +Y++ H+ E + + K VSHP+ +Q++YL HK +LKE
Sbjct: 766 TYGAQWDVFQKQDVSKLLEYIKNHSLELESMDSSK-KKVSHPLLEQSYYLDEYHKARLKE 824
Query: 313 EHGVEPWTFEQKLGDAVFIPAGCPHQVRNLKSCIKVALDFVSPENVGECVKLTGEFRRLP 372
E VEPW+F+Q +G+AV +PAGCP+Q+R KSC+ L F+SPE+V E +K E +LP
Sbjct: 825 EFDVEPWSFDQCVGEAVILPAGCPYQIRKNKSCVNAVLKFLSPEHVSESIKRVKELNQLP 884
Query: 373 SDHRAKEDKLEIKKIALNALKEVV 396
++K +K+E+KK+A++ + E V
Sbjct: 885 QSVKSKANKIEVKKMAIHKISEAV 908
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 52/127 (40%), Positives = 71/127 (55%), Gaps = 1/127 (0%)
Query: 2 FFMGYMRGRRHPMTFWPEMLKLKDWPPSSMFDQRLPRHGAEFITALPFPEYTDPRYGPLN 61
FF+G +RG+ T E LKL+ W SS+F ++ P H AE + LP Y DP+ G LN
Sbjct: 568 FFLGSLRGKAETNT-CQERLKLEGWLSSSLFKEQFPNHYAEILNILPISHYMDPKRGLLN 626
Query: 62 LAVRLPAGVLKPDLGPKTYIAYGCYEELGRGDSVTKLHCDMSDAVNILMHTAEVSYDTEQ 121
+A LP V PD GP I+Y EE + DSV KL + D V+IL++ E T Q
Sbjct: 627 IAANLPDTVQPPDFGPCLNISYRSGEEYAQPDSVKKLGFETCDMVDILLYVTETPVSTNQ 686
Query: 122 LDKIAKI 128
+ +I K+
Sbjct: 687 ICRIRKL 693
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.316 0.134 0.406
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 10,842,214
Number of extensions: 493843
Number of successful extensions: 1589
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 1584
Number of HSP's successfully gapped: 11
Length of query: 454
Length of database: 11,106,569
Length adjustment: 102
Effective length of query: 352
Effective length of database: 8,310,137
Effective search space: 2925168224
Effective search space used: 2925168224
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 113 (48.1 bits)