BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0425600 Os03g0425600|Os03g0425600
(465 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G15490.1 | chr5:5027872-5029314 REVERSE LENGTH=481 840 0.0
AT3G29360.1 | chr3:11267375-11268817 REVERSE LENGTH=481 826 0.0
AT5G39320.1 | chr5:15743254-15744696 FORWARD LENGTH=481 818 0.0
AT1G26570.1 | chr1:9182801-9184246 FORWARD LENGTH=482 781 0.0
AT3G01010.1 | chr3:4342-4818 FORWARD LENGTH=159 274 7e-74
>AT5G15490.1 | chr5:5027872-5029314 REVERSE LENGTH=481
Length = 480
Score = 840 bits (2170), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/465 (85%), Positives = 432/465 (92%), Gaps = 1/465 (0%)
Query: 1 MAVIALKCPDVEVVVVDISAARIDAWNSDALPIYEPGLDDVVRRCRGRNLFFSSDVERHV 60
MAVIALKCP VEV VVDIS RI+AWNSD LPIYEPGLDDVV++CRG+NLFFS+DVE+HV
Sbjct: 17 MAVIALKCPSVEVAVVDISVPRINAWNSDQLPIYEPGLDDVVKQCRGKNLFFSTDVEKHV 76
Query: 61 GEADIVFVSVNTPTKARGLGAGKAADLTYWESAARMIAAVATSDKVVVEKSTVPVKTAEA 120
EADIVFVSVNTPTK RGLGAGKAADLTYWESAARMIA V+ SDK+VVEKSTVPVKTAEA
Sbjct: 77 READIVFVSVNTPTKTRGLGAGKAADLTYWESAARMIADVSVSDKIVVEKSTVPVKTAEA 136
Query: 121 IEKILDHNGRDGVGFQILSNPEFLAEGTAIRDLLAPDRVLIGGRETAAGRAAVQALKDVY 180
IEKIL HN + G+ FQILSNPEFLAEGTAI DL PDRVLIGGRET G AAV+ALKD+Y
Sbjct: 137 IEKILTHNSK-GIKFQILSNPEFLAEGTAIEDLFMPDRVLIGGRETTEGFAAVKALKDIY 195
Query: 181 TRWVPEERILTTNLWSAELSKLAANAFLAQRISSVNAMSALCEATGADVAEVAYAVGKDS 240
+WVPEERILTTNLWSAELSKLAANAFLAQRISSVNAMSALCEATGA+V+EV+YAVGKDS
Sbjct: 196 AQWVPEERILTTNLWSAELSKLAANAFLAQRISSVNAMSALCEATGANVSEVSYAVGKDS 255
Query: 241 RIGAKFLNASVGFGGSCFQKDILNLVYICECNGLPEVANYWKQVIKINDYQKSRFVNRVV 300
RIG KFLN+SVGFGGSCFQKDILNLVYICECNGLPEVA YWKQVIKINDYQK+RFVNR+V
Sbjct: 256 RIGPKFLNSSVGFGGSCFQKDILNLVYICECNGLPEVAEYWKQVIKINDYQKTRFVNRIV 315
Query: 301 SSMFNTVAGKKIAVLGFAFKKDTGDTRETPAIDVCKGLIGDKAKVSIYDPQVTEDQVQRD 360
SSMFNTV+ KKIAVLGFAFKKDTGDTRETPAIDVCKGL+GDKA++SIYDPQVTE+Q+QRD
Sbjct: 316 SSMFNTVSNKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDPQVTEEQIQRD 375
Query: 361 LAMSKFDWDHPVHLQPMSPTAIKQVSVAWDAYEAARAAHGVCILTEWDEFRSLDYARIYG 420
L M+KFDWDHP+HLQPMSPT +KQVSVAWDAY A + AHG+CILTEWDEF+ LD+ RI+
Sbjct: 376 LTMNKFDWDHPLHLQPMSPTTVKQVSVAWDAYTATKDAHGICILTEWDEFKKLDFQRIFE 435
Query: 421 GMQKPAFVFDGRNVVDAEKLREIGFIVYSIGKPLDAWLKDMPAVA 465
MQKPAFVFDGRNVVDA+KLREIGFIVYSIGKPLD WLKDMPA+A
Sbjct: 436 NMQKPAFVFDGRNVVDADKLREIGFIVYSIGKPLDQWLKDMPALA 480
>AT3G29360.1 | chr3:11267375-11268817 REVERSE LENGTH=481
Length = 480
Score = 826 bits (2133), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/465 (83%), Positives = 428/465 (92%), Gaps = 1/465 (0%)
Query: 1 MAVIALKCPDVEVVVVDISAARIDAWNSDALPIYEPGLDDVVRRCRGRNLFFSSDVERHV 60
MAVIALKCPDVEV VVDIS RI+AWNSD LPIYEPGLDDVV++CRG+NLFFS+DVE+HV
Sbjct: 17 MAVIALKCPDVEVAVVDISVPRINAWNSDTLPIYEPGLDDVVKQCRGKNLFFSTDVEKHV 76
Query: 61 GEADIVFVSVNTPTKARGLGAGKAADLTYWESAARMIAAVATSDKVVVEKSTVPVKTAEA 120
EADIVFVSVNTPTK RGLGAGKAADLTYWESAARMIA V+ SDK+VVEKSTVPVKTAEA
Sbjct: 77 READIVFVSVNTPTKTRGLGAGKAADLTYWESAARMIADVSVSDKIVVEKSTVPVKTAEA 136
Query: 121 IEKILDHNGRDGVGFQILSNPEFLAEGTAIRDLLAPDRVLIGGRETAAGRAAVQALKDVY 180
IEKIL HN + G+ FQILSNPEFLAEGTAI+DL PDRVLIGGRET G AVQ LK+VY
Sbjct: 137 IEKILTHNSK-GIKFQILSNPEFLAEGTAIKDLFNPDRVLIGGRETPEGFKAVQTLKNVY 195
Query: 181 TRWVPEERILTTNLWSAELSKLAANAFLAQRISSVNAMSALCEATGADVAEVAYAVGKDS 240
WVPE +I+TTNLWSAELSKLAANAFLAQRISSVNAMSALCEATGADV +V+YAVG DS
Sbjct: 196 AHWVPEGQIITTNLWSAELSKLAANAFLAQRISSVNAMSALCEATGADVTQVSYAVGTDS 255
Query: 241 RIGAKFLNASVGFGGSCFQKDILNLVYICECNGLPEVANYWKQVIKINDYQKSRFVNRVV 300
RIG KFLN+SVGFGGSCFQKDILNLVYICECNGLPEVA YWKQVIKINDYQKSRFVNRVV
Sbjct: 256 RIGPKFLNSSVGFGGSCFQKDILNLVYICECNGLPEVAEYWKQVIKINDYQKSRFVNRVV 315
Query: 301 SSMFNTVAGKKIAVLGFAFKKDTGDTRETPAIDVCKGLIGDKAKVSIYDPQVTEDQVQRD 360
SSMFN+V+ KKIAVLGFAFKKDTGDTRETPAIDVCKGL+ DKA++SIYDPQVTEDQ+QRD
Sbjct: 316 SSMFNSVSNKKIAVLGFAFKKDTGDTRETPAIDVCKGLLEDKARLSIYDPQVTEDQIQRD 375
Query: 361 LAMSKFDWDHPVHLQPMSPTAIKQVSVAWDAYEAARAAHGVCILTEWDEFRSLDYARIYG 420
L+M+KFDWDHP+HLQPMSPT +KQV+V WDAYEA + AHG+CI+TEWDEF++LD+ +I+
Sbjct: 376 LSMNKFDWDHPLHLQPMSPTTVKQVTVTWDAYEATKDAHGICIMTEWDEFKNLDFQKIFD 435
Query: 421 GMQKPAFVFDGRNVVDAEKLREIGFIVYSIGKPLDAWLKDMPAVA 465
MQKPAFVFDGRN+++ +KLREIGFIVYSIGKPLD WLKDMPAVA
Sbjct: 436 NMQKPAFVFDGRNIMNLQKLREIGFIVYSIGKPLDDWLKDMPAVA 480
>AT5G39320.1 | chr5:15743254-15744696 FORWARD LENGTH=481
Length = 480
Score = 818 bits (2113), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/463 (82%), Positives = 423/463 (91%), Gaps = 1/463 (0%)
Query: 1 MAVIALKCPDVEVVVVDISAARIDAWNSDALPIYEPGLDDVVRRCRGRNLFFSSDVERHV 60
MAVIALKCPD+EV VVDIS RI+AWNSD LPIYEPGLDD+V++CRG+NLFFS+DVE+HV
Sbjct: 17 MAVIALKCPDIEVAVVDISVPRINAWNSDQLPIYEPGLDDIVKQCRGKNLFFSTDVEKHV 76
Query: 61 GEADIVFVSVNTPTKARGLGAGKAADLTYWESAARMIAAVATSDKVVVEKSTVPVKTAEA 120
EADIVFVSVNTPTK GLGAGKAADLTYWESAARMIA V+ SDK+VVEKSTVPVKTAEA
Sbjct: 77 READIVFVSVNTPTKTTGLGAGKAADLTYWESAARMIADVSVSDKIVVEKSTVPVKTAEA 136
Query: 121 IEKILDHNGRDGVGFQILSNPEFLAEGTAIRDLLAPDRVLIGGRETAAGRAAVQALKDVY 180
IEKIL HN + G+ FQILSNPEFLAEGTAI DL PDRVLIGGRET G AVQ LK+VY
Sbjct: 137 IEKILMHNSK-GIKFQILSNPEFLAEGTAIADLFNPDRVLIGGRETPEGFKAVQTLKEVY 195
Query: 181 TRWVPEERILTTNLWSAELSKLAANAFLAQRISSVNAMSALCEATGADVAEVAYAVGKDS 240
WVPE +I+TTNLWSAELSKLAANAFLAQRISSVNAMSALCE+TGADV +V+YAVG DS
Sbjct: 196 ANWVPEGQIITTNLWSAELSKLAANAFLAQRISSVNAMSALCESTGADVTQVSYAVGTDS 255
Query: 241 RIGAKFLNASVGFGGSCFQKDILNLVYICECNGLPEVANYWKQVIKINDYQKSRFVNRVV 300
RIG+KFLNASVGFGGSCFQKDILNLVYIC+CNGLPEVA YWKQVIKINDYQK+RFVNR+V
Sbjct: 256 RIGSKFLNASVGFGGSCFQKDILNLVYICQCNGLPEVAEYWKQVIKINDYQKNRFVNRIV 315
Query: 301 SSMFNTVAGKKIAVLGFAFKKDTGDTRETPAIDVCKGLIGDKAKVSIYDPQVTEDQVQRD 360
SSMFNTV+ KK+A+LGFAFKKDTGDTRETPAIDVCKGL+GDKA++SIYDPQVTE+Q+QRD
Sbjct: 316 SSMFNTVSNKKVAILGFAFKKDTGDTRETPAIDVCKGLLGDKAQISIYDPQVTEEQIQRD 375
Query: 361 LAMSKFDWDHPVHLQPMSPTAIKQVSVAWDAYEAARAAHGVCILTEWDEFRSLDYARIYG 420
L+M KFDWDHP+HLQPMSPT +KQVSV WDAYEA + AH VC+LTEWDEF+SLDY +I+
Sbjct: 376 LSMKKFDWDHPLHLQPMSPTTVKQVSVTWDAYEATKDAHAVCVLTEWDEFKSLDYQKIFD 435
Query: 421 GMQKPAFVFDGRNVVDAEKLREIGFIVYSIGKPLDAWLKDMPA 463
MQKPAF+FDGRN+++ KLREIGFIVYSIGKPLD WLKDMPA
Sbjct: 436 NMQKPAFIFDGRNIMNVNKLREIGFIVYSIGKPLDPWLKDMPA 478
>AT1G26570.1 | chr1:9182801-9184246 FORWARD LENGTH=482
Length = 481
Score = 781 bits (2016), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 370/466 (79%), Positives = 422/466 (90%), Gaps = 2/466 (0%)
Query: 1 MAVIALKCPDVEVVVVDISAARIDAWNSDALPIYEPGLDDVVRRCRGRNLFFSSDVERHV 60
MAV+ALKCP++EVVVVDIS RI+AWNSD LPIYEPGL+DVV++CRG+NLFFS+DVE+HV
Sbjct: 17 MAVMALKCPEIEVVVVDISEPRINAWNSDRLPIYEPGLEDVVKQCRGKNLFFSTDVEKHV 76
Query: 61 GEADIVFVSVNTPTKARGLGAGKAADLTYWESAARMIAAVATSDKVVVEKSTVPVKTAEA 120
E+DIVFVSVNTPTK +GLGAGKAADLTYWESAARMIA V+ S K+VVEKSTVPV+TAEA
Sbjct: 77 FESDIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSSKIVVEKSTVPVRTAEA 136
Query: 121 IEKILDHNGRDGVGFQILSNPEFLAEGTAIRDLLAPDRVLIGGRETAAGRAAVQALKDVY 180
IEKIL HN + G+ FQILSNPEFLAEGTAI+DL PDRVLIGGR+TAAG+ A++AL+DVY
Sbjct: 137 IEKILTHNSK-GIEFQILSNPEFLAEGTAIKDLYNPDRVLIGGRDTAAGQKAIKALRDVY 195
Query: 181 TRWVPEERILTTNLWSAELSKLAANAFLAQRISSVNAMSALCEATGADVAEVAYAVGKDS 240
WVP E+I+ TNLWSAELSKLAANAFLAQRISSVNAMSALCEATGADV +VA+AVG D+
Sbjct: 196 AHWVPVEQIICTNLWSAELSKLAANAFLAQRISSVNAMSALCEATGADVTQVAHAVGTDT 255
Query: 241 RIGAKFLNASVGFGGSCFQKDILNLVYICECNGLPEVANYWKQVIKINDYQKSRFVNRVV 300
RIG KFLNASVGFGGSCFQKDILNL+YICECNGLPE ANYWKQV+K+NDYQK RF NRVV
Sbjct: 256 RIGPKFLNASVGFGGSCFQKDILNLIYICECNGLPEAANYWKQVVKVNDYQKIRFANRVV 315
Query: 301 SSMFNTVAGKKIAVLGFAFKKDTGDTRETPAIDVCKGLIGDKAKVSIYDPQVTEDQVQRD 360
SSMFNTV+GKKIA+LGFAFKKDTGDTRETPAIDVC L+ DKAK+SIYDPQV E+Q++RD
Sbjct: 316 SSMFNTVSGKKIAILGFAFKKDTGDTRETPAIDVCNRLVADKAKLSIYDPQVLEEQIRRD 375
Query: 361 LAMSKFDWDHPVHLQPMSPTAI-KQVSVAWDAYEAARAAHGVCILTEWDEFRSLDYARIY 419
L+M++FDWDHPV LQ + I +QV+V DAYEA + AHG+C+LTEWDEF+SLD+ +I+
Sbjct: 376 LSMARFDWDHPVPLQQIKAEGISEQVNVVSDAYEATKDAHGLCVLTEWDEFKSLDFKKIF 435
Query: 420 GGMQKPAFVFDGRNVVDAEKLREIGFIVYSIGKPLDAWLKDMPAVA 465
MQKPAFVFDGRNVVDA KLREIGFIVYSIGKPLD+WLKDMPAVA
Sbjct: 436 DNMQKPAFVFDGRNVVDAVKLREIGFIVYSIGKPLDSWLKDMPAVA 481
>AT3G01010.1 | chr3:4342-4818 FORWARD LENGTH=159
Length = 158
Score = 274 bits (701), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 125/163 (76%), Positives = 143/163 (87%), Gaps = 5/163 (3%)
Query: 303 MFNTVAGKKIAVLGFAFKKDTGDTRETPAIDVCKGLIGDKAKVSIYDPQVTEDQVQRDLA 362
MFNTV+ KKI VL FAFKKDT RETPAIDVCKGL+GDKA++SIYDPQVTE+Q+QRDL
Sbjct: 1 MFNTVSNKKIVVLEFAFKKDT---RETPAIDVCKGLLGDKARISIYDPQVTEEQIQRDLT 57
Query: 363 MSKFDWDHPVHLQPMSPTAIKQVSVAWDAYEAARAAHGVCILTEWDEFRSLDYARIYGGM 422
M+ FDWDHP+HLQPMSPT +KQVSVAWDAY A + AHG+C+LTEWDE+++LDY RI+ M
Sbjct: 58 MNTFDWDHPLHLQPMSPTTVKQVSVAWDAYAATKDAHGICLLTEWDEYKTLDYERIFENM 117
Query: 423 QKPAFVFDGRNVVDAEKLREIGFIVYSIGKPLDAWLKDMPAVA 465
QKPAFVFDGRNV DAEKLR+IGFIVYSIGKPLD W MPA+A
Sbjct: 118 QKPAFVFDGRNVFDAEKLRKIGFIVYSIGKPLDQW--HMPALA 158
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.320 0.134 0.400
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 9,595,056
Number of extensions: 381799
Number of successful extensions: 833
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 827
Number of HSP's successfully gapped: 5
Length of query: 465
Length of database: 11,106,569
Length adjustment: 102
Effective length of query: 363
Effective length of database: 8,310,137
Effective search space: 3016579731
Effective search space used: 3016579731
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 113 (48.1 bits)