BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0425300 Os03g0425300|AK120530
(338 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G07920.1 | chr5:2525197-2528396 REVERSE LENGTH=729 573 e-164
AT5G63770.1 | chr5:25519293-25522404 FORWARD LENGTH=713 442 e-124
AT4G28130.1 | chr4:13971552-13974323 FORWARD LENGTH=467 116 2e-26
AT5G57690.1 | chr5:23372063-23374469 REVERSE LENGTH=488 115 3e-26
AT2G18730.1 | chr2:8118976-8121689 FORWARD LENGTH=489 110 1e-24
AT2G20900.1 | chr2:8989412-8992798 REVERSE LENGTH=510 109 2e-24
AT4G30340.1 | chr4:14838465-14840941 REVERSE LENGTH=493 106 2e-23
>AT5G07920.1 | chr5:2525197-2528396 REVERSE LENGTH=729
Length = 728
Score = 573 bits (1478), Expect = e-164, Method: Compositional matrix adjust.
Identities = 263/338 (77%), Positives = 307/338 (90%)
Query: 1 VFELSSSQGPEIGLLLFRKVPHFRILVCGGDGTVGWVLDAIDKQNYESPPPVAILPAGTG 60
VFELSS QGPE+GL LFRKVPHFR+LVCGGDGT GWVLDAI+KQN+ SPP VAILPAGTG
Sbjct: 391 VFELSSVQGPEVGLFLFRKVPHFRVLVCGGDGTAGWVLDAIEKQNFISPPAVAILPAGTG 450
Query: 61 NDLSRVLSWGGGLGAVEKQGGLCTVLHDIEHAAVTILDRWKVAIEDKRGKNVLMVKYMNN 120
NDLSRVL+WGGGLG+VE+QGGL TVL +IEHAAVT+LDRWKV+I +++GK + KYMNN
Sbjct: 451 NDLSRVLNWGGGLGSVERQGGLSTVLQNIEHAAVTVLDRWKVSILNQQGKQLQPPKYMNN 510
Query: 121 YLGIGCDAKVALDIHNLREENPEKFYSQFLNKVLYAREGAKSMIDRTFVDLPWQVRLEVD 180
Y+G+GCDAKVAL+IHNLREENPE+FYSQF+NKVLYAREGA+S++DRTF D PWQVR+EVD
Sbjct: 511 YIGVGCDAKVALEIHNLREENPERFYSQFMNKVLYAREGARSIMDRTFEDFPWQVRVEVD 570
Query: 181 GTEIEIPEDSEGVLVANIPSYMGGVDLWKSEDDNPDNFDPQSIHDKMVEVVSISGTWHLG 240
G +IE+PED+EG+LVANI SYMGGVDLW++ED+ +NFDPQS+HDK+VEVVSISGTWHLG
Sbjct: 571 GVDIEVPEDAEGILVANIGSYMGGVDLWQNEDETYENFDPQSMHDKIVEVVSISGTWHLG 630
Query: 241 TLQVGLSRARRIAQGQSIKIQIFAPFPVQVDGEPWTQNPCTLKISHHGQAFMLRRTIEES 300
LQVGLSRARR+AQG ++KIQ+ AP PVQ+DGEPW Q PCTL ISHHGQAFML+R EE
Sbjct: 631 KLQVGLSRARRLAQGSAVKIQLCAPLPVQIDGEPWNQQPCTLTISHHGQAFMLKRAAEEP 690
Query: 301 LGHAAAIVTDVLENAESSHLITASQKRALLQEMALRLS 338
LGHAAAI+TDVLENAE++ +I ASQKR LLQEMALRL+
Sbjct: 691 LGHAAAIITDVLENAETNQVINASQKRTLLQEMALRLT 728
>AT5G63770.1 | chr5:25519293-25522404 FORWARD LENGTH=713
Length = 712
Score = 442 bits (1138), Expect = e-124, Method: Compositional matrix adjust.
Identities = 213/341 (62%), Positives = 265/341 (77%), Gaps = 3/341 (0%)
Query: 1 VFELSSSQGPEIGLLLFRKVPHFRILVCGGDGTVGWVLDAIDKQNYESPPPVAILPAGTG 60
VFEL S QGP+ GL L KV +FR+LVCGGDGTV WVLDAI+K+N+ESPPPVAILP GTG
Sbjct: 372 VFELGSCQGPDAGLDLCSKVKYFRVLVCGGDGTVAWVLDAIEKRNFESPPPVAILPLGTG 431
Query: 61 NDLSRVLSWGGGLGAVEKQGGLCTVLHDIEHAAVTILDRWKVAIEDKRGKNVLMV---KY 117
NDLSRVL WG G+ V+ QG L T L DI+HAAVT+LDRW V I ++ + K+
Sbjct: 432 NDLSRVLQWGRGISVVDGQGSLRTFLQDIDHAAVTMLDRWSVKIVEESTEKFPAREGHKF 491
Query: 118 MNNYLGIGCDAKVALDIHNLREENPEKFYSQFLNKVLYAREGAKSMIDRTFVDLPWQVRL 177
M NYLGIGCDAKVA + H +R+E PEKF SQF+NK+ YA+EGA+ ++DR DLPWQV L
Sbjct: 492 MMNYLGIGCDAKVAYEFHMMRQEKPEKFCSQFVNKLRYAKEGARDIMDRACADLPWQVWL 551
Query: 178 EVDGTEIEIPEDSEGVLVANIPSYMGGVDLWKSEDDNPDNFDPQSIHDKMVEVVSISGTW 237
EVDG +IEIP+DSEG++V NI SYMGGVDLW+++ ++ DNF Q +HDK +EVV + G W
Sbjct: 552 EVDGKDIEIPKDSEGLIVLNIGSYMGGVDLWQNDYEHDDNFSIQCMHDKTLEVVCVRGAW 611
Query: 238 HLGTLQVGLSRARRIAQGQSIKIQIFAPFPVQVDGEPWTQNPCTLKISHHGQAFMLRRTI 297
HLG LQVGLS+ARR+AQG+ I+I + +PFPVQ+DGEP+ Q P L+I+HHGQ FMLRR
Sbjct: 612 HLGKLQVGLSQARRLAQGKVIRIHVSSPFPVQIDGEPFIQQPGCLEITHHGQVFMLRRAS 671
Query: 298 EESLGHAAAIVTDVLENAESSHLITASQKRALLQEMALRLS 338
+E GHAAAI+ +VL +AE +I ASQK+ LLQ+MAL LS
Sbjct: 672 DEPRGHAAAIMNEVLLDAECKGVINASQKKVLLQQMALHLS 712
>AT4G28130.1 | chr4:13971552-13974323 FORWARD LENGTH=467
Length = 466
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/357 (24%), Positives = 159/357 (44%), Gaps = 66/357 (18%)
Query: 23 FRILVCGGDGTVGWVLDAIDKQNYESPPPVAILPAGTGNDLSRVLSWGGGLGAVEKQGGL 82
+I+V GGDGT GW+L + N +PPP+A +P GTGN+L WG ++ +
Sbjct: 112 LKIIVAGGDGTAGWLLGVVSDLNLSNPPPIATVPLGTGNNLPFAFGWGKKNPGTDR-SSV 170
Query: 83 CTVLHDIEHAAVTILDRWKVAIE---DKRGKNVLMVKYMN-------------------- 119
+ L + +A +D WK+ + K G + +K +
Sbjct: 171 ESFLGKVINAKEMKIDNWKILMRMKHPKEGSCDITLKLPHSLPRIFPSDQENMEGYHTYR 230
Query: 120 ----NYLGIGCDAKVALDIHNLREENPEKFYSQFLNKVLYAREGAK------SMIDRTFV 169
NY +G DA+V+ H+ R+ +PE+F +Q +N+ Y + S+ +
Sbjct: 231 GGFWNYFSLGMDAQVSYAFHSQRKLHPERFKNQLVNQSTYLKLSCTQGWFFASLFHPSSQ 290
Query: 170 DLPWQVRLEV-----DGTEIEIPEDSEGVLVANIPSYMGGVDLWKSEDDNPDNFDPQS-- 222
++ ++++ ++ IP+ ++ N+PS+ GG++ W + NP +S
Sbjct: 291 NIAKLAKIQICDRNGQWNDLHIPQSIRSIVCLNLPSFSGGLNPWGTP--NPKKQRDRSLT 348
Query: 223 ---IHDKMVEVVSISGTWHLGTLQVGLSRARRIAQGQSIKIQIFAPFP----VQVDGEPW 275
+ D ++E+V WH L R+AQ ++++ +++DGEPW
Sbjct: 349 APFVDDGLIEIVGFRNAWHGLILLSPNGHGTRLAQANRVRLEFKKGAAKHAYMRIDGEPW 408
Query: 276 TQ------NPCTLKISHHGQAFML--RRTIEESLGHAAAIV--------TDVLENAE 316
Q ++ISHHGQ ML + +S+ +++I+ + V+EN E
Sbjct: 409 KQPLPSNDETVMVEISHHGQVNMLATQNCRSKSMYESSSIIRFSNDEDDSSVVENEE 465
>AT5G57690.1 | chr5:23372063-23374469 REVERSE LENGTH=488
Length = 487
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 98/329 (29%), Positives = 142/329 (43%), Gaps = 56/329 (17%)
Query: 1 VFELSSSQGPEIGLLLFRKVPHFRILVCGGDGTVGWVLDAIDK---QNYESPPPVAILPA 57
E +S+G E + K+ RI+V GGDGTVGWVL + + QN PPV+I+P
Sbjct: 138 CLEAFASRGDECAKEIREKM---RIVVAGGDGTVGWVLGCLGELNLQNRLPVPPVSIMPL 194
Query: 58 GTGNDLSRVLSWGGGLGAVEKQGGLCTVLHDIEHAAVTILDRWKVAIEDKRGKNV----- 112
GTGNDLSR WGG K + LH A ++ LD W + I G+ V
Sbjct: 195 GTGNDLSRSFGWGGSFPFAWKS-AIKRTLHRASVAPISRLDSWNILITMPSGEIVDPPYS 253
Query: 113 ---LMVKYMN---------------------NYLGIGCDAKVALDIHNLREENPEKFYSQ 148
Y++ NY IG DA+VA H+LR E P
Sbjct: 254 LKATQECYIDQNLEIEGEIPPSTNGYEGVFYNYFSIGMDAQVAYGFHHLRNEKPYLANGP 313
Query: 149 FLNKVLYAREGAK-------SMIDRTFVDLPWQVRLEV---DGTEIE---IPEDSEGVLV 195
NK++Y+ G + D L + L + D +E E +P+ V+
Sbjct: 314 IANKIIYSGYGCSQGWFLTHCINDPGLRGLKNIMTLHIKKLDSSEWEKVPVPKSVRAVVA 373
Query: 196 ANIPSYMGGVDLW---KSEDDNPDNFDPQSIHDKMVEVVSISGTWHLGTLQVGLSRARRI 252
N+ SY G + W K + F D ++E+ + WH + V L A+ I
Sbjct: 374 LNLHSYGSGRNPWGNLKQDYLEKRGFVEAQADDGLLEIFGLKQGWHASFVMVELISAKHI 433
Query: 253 AQGQSIKIQI----FAPFPVQVDGEPWTQ 277
AQ +I+++I + +Q+DGEPW Q
Sbjct: 434 AQAAAIRLEIRGGDWKDAFMQMDGEPWKQ 462
>AT2G18730.1 | chr2:8118976-8121689 FORWARD LENGTH=489
Length = 488
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 126/307 (41%), Gaps = 53/307 (17%)
Query: 23 FRILVCGGDGTVGWVLDAIDKQNYESP---PPVAILPAGTGNDLSRVLSWGGGLGAVEKQ 79
RI+V GGDGTVGWVL + + N + PPV ++P GTGNDLSR WGG +
Sbjct: 158 LRIMVAGGDGTVGWVLGCLGELNKDGKSQIPPVGVIPLGTGNDLSRSFGWGGSF-PFAWR 216
Query: 80 GGLCTVLHDIEHAAVTILDRWKVAIEDKRGKNV--------------------------L 113
+ LH V LD WK+ + G+ V L
Sbjct: 217 SAVKRTLHRASMGPVARLDSWKILVSMPSGEVVDPPYSLKPAEENELDQGLDAGIDAPPL 276
Query: 114 MVKY---MNNYLGIGCDAKVALDIHNLREENPEKFYSQFLNKVLYAREGAK-------SM 163
Y NYL IG DA+VA H+LR P NK++Y+ G +
Sbjct: 277 AKAYEGVFYNYLSIGMDAQVAYGFHHLRNTKPYLAQGPISNKIIYSSFGCSQGWFCTPCV 336
Query: 164 IDRTFVDLPWQVRLEVDGT------EIEIPEDSEGVLVANIPSYMGGVDLW---KSEDDN 214
D L +++ + EI +P++ ++ N+ SY G W K +
Sbjct: 337 NDPGLRGLRNIMKIHIKKVNCSQWEEIAVPKNVRSIVALNLHSYGSGSHPWGNLKPDYLE 396
Query: 215 PDNFDPQSIHDKMVEVVSISGTWHLGTLQVGLSRARRIAQGQSIKIQI----FAPFPVQV 270
F D ++E+ WH + L A+ IAQ +++ ++ + +Q+
Sbjct: 397 KRGFVEAHCDDGLIEIFGFKQGWHASFVMAELISAKHIAQAAAVRFELRGGDWRDAFLQM 456
Query: 271 DGEPWTQ 277
DGEPW Q
Sbjct: 457 DGEPWKQ 463
>AT2G20900.1 | chr2:8989412-8992798 REVERSE LENGTH=510
Length = 509
Score = 109 bits (272), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 135/328 (41%), Gaps = 58/328 (17%)
Query: 23 FRILVCGGDGTVGWVLDAIDKQNYESPPPVAILPAGTGNDLSRVLSWGGGLGAVEKQGGL 82
+I+V GGDGT GW+L + PPP+A +P GTGN+L WG ++ +
Sbjct: 105 LKIIVAGGDGTAGWLLGVVCDLKLSHPPPIATVPLGTGNNLPFAFGWGKKNPGTDRTA-V 163
Query: 83 CTVLHDIEHAAVTILDRWKVAIEDKRGK---------------------NVLMVKYMN-- 119
+ L + A V +D W + + K K V +N
Sbjct: 164 ESFLEQVLKAKVMKIDNWHILMRMKTPKEGGSCDPVAPLELPHSLHAFHRVSPTDELNKE 223
Query: 120 ----------NYLGIGCDAKVALDIHNLREENPEKFYSQFLNKVLYAREGAK------SM 163
NY +G DA+++ H+ R+ +PEKF +Q +N+ Y + G S+
Sbjct: 224 GCHTFRGGFWNYFSLGMDAQISYAFHSERKLHPEKFKNQLVNQSTYVKLGCTQGWFCASL 283
Query: 164 IDRTFVDLPWQVRLEV-----DGTEIEIPEDSEGVLVANIPSYMGGVDLWKSEDDNPDN- 217
++ ++++ ++ IP ++ N+PS+ GG++ W + +
Sbjct: 284 FHPASRNIAQLAKVKIATRNGQWQDLHIPHSIRSIVCLNLPSFSGGLNPWGTPNPRKQRD 343
Query: 218 --FDPQSIHDKMVEVVSISGTWHLGTLQVGLSRARRIAQGQSIKIQIFAPFP----VQVD 271
P + D ++EVV WH L R+AQ I+ + +++D
Sbjct: 344 RGLTPPFVDDGLIEVVGFRNAWHGLVLLAPNGHGTRLAQANRIRFEFHKGATDHTFMRMD 403
Query: 272 GEPWTQ------NPCTLKISHHGQAFML 293
GEPW Q ++ISH GQ ML
Sbjct: 404 GEPWKQPLPLDDETVMVEISHLGQVNML 431
>AT4G30340.1 | chr4:14838465-14840941 REVERSE LENGTH=493
Length = 492
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/309 (27%), Positives = 125/309 (40%), Gaps = 58/309 (18%)
Query: 24 RILVCGGDGTVGWVLDAI---DKQNYESPPPVAILPAGTGNDLSRVLSWGGGLGAVEKQG 80
RI+V GGDGTVGWVL + K PPV ++P GTGNDLSR SWGG +
Sbjct: 162 RIMVAGGDGTVGWVLGCLGELHKDGKSHIPPVGVIPLGTGNDLSRSFSWGGSF-PFAWRS 220
Query: 81 GLCTVLHDIEHAAVTILDRWKVAIEDKRG------------------------------- 109
+ LH ++ LD WK+ + G
Sbjct: 221 AMKRTLHRATLGSIARLDSWKIVVSMPSGEVVDPPYSLKPTIEETALDQALDADGDVPPK 280
Query: 110 -KNVLMVKYMNNYLGIGCDAKVALDIHNLREENPEKFYSQFLNKVLYAREGA-KSMIDRT 167
K+ V Y NY IG DA+VA H+LR E P NK++Y+ +
Sbjct: 281 AKSYEGVFY--NYFSIGMDAQVAYGFHHLRNEKPYLAQGPVTNKIIYSSYSCTQGWFCTP 338
Query: 168 FVDLPWQVRLE------------VDGTEIEIPEDSEGVLVANIPSYMGGVDLW---KSED 212
V+ P L + EI +P+ ++V N+ +Y G W + +
Sbjct: 339 CVNNPALRGLRNIMKIHIKKANCSEWEEIHVPKSVRSIVVLNLYNYGSGRHPWGNLRPKY 398
Query: 213 DNPDNFDPQSIHDKMVEVVSISGTWHLGTLQVGLSRARRIAQGQSIKIQI----FAPFPV 268
F D ++E+ + WH + + A+ IAQ +I+ ++ + +
Sbjct: 399 LEKRGFVEAHCDDGLIEIFGLKQGWHASFVMAEIISAKHIAQAAAIRFELRGGDWKNAFL 458
Query: 269 QVDGEPWTQ 277
Q+DGEPW Q
Sbjct: 459 QMDGEPWKQ 467
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.318 0.137 0.412
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 7,599,627
Number of extensions: 338402
Number of successful extensions: 804
Number of sequences better than 1.0e-05: 7
Number of HSP's gapped: 790
Number of HSP's successfully gapped: 10
Length of query: 338
Length of database: 11,106,569
Length adjustment: 99
Effective length of query: 239
Effective length of database: 8,392,385
Effective search space: 2005780015
Effective search space used: 2005780015
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 112 (47.8 bits)