BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os03g0417800 Os03g0417800|AK121654
         (148 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G26355.1  | chr1:9117950-9118611 REVERSE LENGTH=114             70   5e-13
AT1G69230.1  | chr1:26026543-26027085 REVERSE LENGTH=111           64   2e-11
AT2G03680.1  | chr2:1121398-1121850 FORWARD LENGTH=120             64   3e-11
AT5G15600.1  | chr5:5078405-5078863 FORWARD LENGTH=128             59   9e-10
AT3G02180.1  | chr3:404989-405457 FORWARD LENGTH=123               58   2e-09
AT4G23496.1  | chr4:12257914-12258297 REVERSE LENGTH=100           48   2e-06

>AT1G26355.1 | chr1:9117950-9118611 REVERSE LENGTH=114
          Length = 113

 Score = 70.1 bits (170), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 36/41 (87%), Positives = 36/41 (87%), Gaps = 1/41 (2%)

Query: 95  TKQIPAGIQGSRSNNNYHRADGQNTGNFLTDRPSTKVHAAP 135
           TKQIPAGI  S S NNY RADGQNTGNFLTDRPSTKVHAAP
Sbjct: 58  TKQIPAGINKS-STNNYIRADGQNTGNFLTDRPSTKVHAAP 97



>AT1G69230.1 | chr1:26026543-26027085 REVERSE LENGTH=111
          Length = 110

 Score = 64.3 bits (155), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 30/40 (75%), Positives = 35/40 (87%), Gaps = 1/40 (2%)

Query: 96  KQIPAGIQGSRSNNNYHRADGQNTGNFLTDRPSTKVHAAP 135
           KQ+PAG+  S S NNY RA+GQNTGNF+TDRPSTKVH+AP
Sbjct: 57  KQVPAGLN-SNSANNYMRAEGQNTGNFITDRPSTKVHSAP 95



>AT2G03680.1 | chr2:1121398-1121850 FORWARD LENGTH=120
          Length = 119

 Score = 63.9 bits (154), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 32/40 (80%), Positives = 34/40 (85%), Gaps = 2/40 (5%)

Query: 96  KQIPAGIQGSRSNNNYHRADGQNTGNFLTDRPSTKVHAAP 135
           KQIPAGI+     NNY RA+GQNTGNFLTDRPSTKVHAAP
Sbjct: 68  KQIPAGIK--TPVNNYARAEGQNTGNFLTDRPSTKVHAAP 105



>AT5G15600.1 | chr5:5078405-5078863 FORWARD LENGTH=128
          Length = 127

 Score = 58.9 bits (141), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 28/41 (68%), Positives = 35/41 (85%), Gaps = 2/41 (4%)

Query: 95  TKQIPAGIQGSRSNNNYHRADGQNTGNFLTDRPSTKVHAAP 135
           T++  AG++GS   NNY+R+DGQN GNFLT+RPSTKVHAAP
Sbjct: 70  TEENSAGVRGSP--NNYYRSDGQNCGNFLTERPSTKVHAAP 108



>AT3G02180.1 | chr3:404989-405457 FORWARD LENGTH=123
          Length = 122

 Score = 57.8 bits (138), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 28/40 (70%), Positives = 33/40 (82%), Gaps = 2/40 (5%)

Query: 96  KQIPAGIQGSRSNNNYHRADGQNTGNFLTDRPSTKVHAAP 135
           K+  AG++GS   NNY R++GQN GNFLTDRPSTKVHAAP
Sbjct: 64  KKTSAGVRGSP--NNYFRSEGQNCGNFLTDRPSTKVHAAP 101



>AT4G23496.1 | chr4:12257914-12258297 REVERSE LENGTH=100
          Length = 99

 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 20/29 (68%), Positives = 24/29 (82%)

Query: 107 SNNNYHRADGQNTGNFLTDRPSTKVHAAP 135
           SNNNY R  GQN+GNF+TDRP+TKV + P
Sbjct: 58  SNNNYQRVQGQNSGNFVTDRPTTKVKSVP 86



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.312    0.128    0.373 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 1,210,906
Number of extensions: 25054
Number of successful extensions: 48
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 46
Number of HSP's successfully gapped: 6
Length of query: 148
Length of database: 11,106,569
Length adjustment: 89
Effective length of query: 59
Effective length of database: 8,666,545
Effective search space: 511326155
Effective search space used: 511326155
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 107 (45.8 bits)