BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0404800 Os03g0404800|AK099537
(266 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G47290.2 | chr1:17336121-17339030 FORWARD LENGTH=440 286 5e-78
AT2G26260.1 | chr2:11178237-11182872 FORWARD LENGTH=565 276 1e-74
AT2G43420.1 | chr2:18031493-18034936 REVERSE LENGTH=562 186 1e-47
AT2G33630.1 | chr2:14236951-14238734 REVERSE LENGTH=481 93 1e-19
AT4G33360.1 | chr4:16067989-16069374 REVERSE LENGTH=345 74 5e-14
AT1G78570.1 | chr1:29550110-29552207 FORWARD LENGTH=670 54 7e-08
AT1G80820.1 | chr1:30370646-30372460 FORWARD LENGTH=333 52 3e-07
AT3G14790.1 | chr3:4964791-4966875 FORWARD LENGTH=665 52 3e-07
AT1G15950.1 | chr1:5478855-5481915 FORWARD LENGTH=345 50 1e-06
AT1G68540.1 | chr1:25720066-25721282 FORWARD LENGTH=322 49 2e-06
>AT1G47290.2 | chr1:17336121-17339030 FORWARD LENGTH=440
Length = 439
Score = 286 bits (733), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 141/235 (60%), Positives = 168/235 (71%), Gaps = 4/235 (1%)
Query: 24 RWCAVTGGRGFMARHLVAALLRSGEWRVRITDLAPAITLDPVEEKGLLGEALRDGHAVYD 83
RWC VTGGRGF ARHLV L+R + VRI DLAPAI L+P EE G+LGEA+R G Y
Sbjct: 10 RWCVVTGGRGFAARHLVEMLVRYQMFHVRIADLAPAIVLNPHEETGILGEAIRSGRVQYV 69
Query: 84 SVNVCDITQLTKAFQGVEVVFHTAAADPDINDFQLHYKVNVEGTKNVIDACVTCKVKRLI 143
S ++ + TQ+ K FQG EVVFH AA D IN+ QL Y VNV+GT NVIDAC+ VKRLI
Sbjct: 70 SADLRNKTQVVKGFQGAEVVFHMAAPDSSINNHQLQYSVNVQGTTNVIDACIEVGVKRLI 129
Query: 144 YTSSSGVVFDGVHGLFDVDESMPYPNKFPDAYAQSKAEAEKLVRNSNGICELLTCSIRPG 203
YTSS VVFDGVHG + DES+PYP K D+Y+ +KAE E L+ +NG LLTC IRP
Sbjct: 130 YTSSPSVVFDGVHGTLNADESLPYPPKHNDSYSATKAEGEALILKANGRSGLLTCCIRPS 189
Query: 204 SIFGPGDTI-VPHLLSHWR---TMFIIGDGMNCDDFVYVENVVHGHICAEKTLST 254
SIFGPGD + VP L++ R + FIIGDG N DF YVENVVH H+CAE+ L++
Sbjct: 190 SIFGPGDKLMVPSLVTAARAGKSKFIIGDGSNFYDFTYVENVVHAHVCAERALAS 244
>AT2G26260.1 | chr2:11178237-11182872 FORWARD LENGTH=565
Length = 564
Score = 276 bits (705), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 143/243 (58%), Positives = 169/243 (69%), Gaps = 8/243 (3%)
Query: 20 EPAA----RWCAVTGGRGFMARHLVAALLRSGEWRVRITDLAPAITLDPVEEKGLLGEAL 75
PAA RWC VTGGRGF ARHLV L+R + VRI DLAPAI LDP E G+L E L
Sbjct: 2 SPAATETERWCVVTGGRGFAARHLVEMLVRYEMFCVRIADLAPAIMLDPQEGNGVLDEGL 61
Query: 76 RDGHAVYDSVNVCDITQLTKAFQGVEVVFHTAAADPDINDFQLHYKVNVEGTKNVIDACV 135
R G Y S ++ D +Q+ KAFQG EVVFH AA D IN+ QL Y VNV+GT+NVIDACV
Sbjct: 62 RSGRVQYISADLRDKSQVVKAFQGAEVVFHMAAPDSSINNHQLQYSVNVQGTQNVIDACV 121
Query: 136 TCKVKRLIYTSSSGVVFDGVHGLFDVDESMPYPNKFPDAYAQSKAEAEKLVRNSNGICEL 195
VKRLIYTSS VVFDGVHG+ + ESM YP K D+Y+ +KAE E+L+ +NG L
Sbjct: 122 DVGVKRLIYTSSPSVVFDGVHGILNGTESMAYPIKHNDSYSATKAEGEELIMKANGRNGL 181
Query: 196 LTCSIRPGSIFGPGD-TIVPHLLSHWR---TMFIIGDGMNCDDFVYVENVVHGHICAEKT 251
LTC IRP SIFGPGD +VP L++ R + FIIGDG N DF YVENV H H+CAE+
Sbjct: 182 LTCCIRPSSIFGPGDRLLVPSLVAAARAGKSKFIIGDGNNLYDFTYVENVAHAHVCAERA 241
Query: 252 LST 254
L++
Sbjct: 242 LAS 244
>AT2G43420.1 | chr2:18031493-18034936 REVERSE LENGTH=562
Length = 561
Score = 186 bits (472), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 106/234 (45%), Positives = 139/234 (59%), Gaps = 6/234 (2%)
Query: 26 CAVTGGRGFMARHLVAALLRSGEWRVRITDLAPAITLDPVEEKGLLGEALRDGHAVYDSV 85
C V GGRGF+ R LV+ LLR G W VR+ D + LD E LL +AL G A Y V
Sbjct: 15 CVVLGGRGFIGRSLVSRLLRLGNWTVRVADSGHTLHLD--ESDSLLEDALSSGRASYHCV 72
Query: 86 NVCDITQLTKAFQGVEVVFHTAAADPDINDFQLHYKVNVEGTKNVIDACVTCKVKRLIYT 145
+V D Q+ K +G VVF+ A D +D+ YKV V+GT+NVI AC V++LIY
Sbjct: 73 DVRDKPQIVKVTEGSYVVFYMGATDLRSHDYFDCYKVIVQGTRNVISACRESGVRKLIYN 132
Query: 146 SSSGVVFDGVHGLFDVDESMPYPNKFPDAYAQSKAEAEKLVRNSNGICELLTCSIRPGSI 205
S++ VVFDG + D DES+ P KF KA+AE L++ +N LLTC++R +
Sbjct: 133 STADVVFDGSQPIRDGDESLRRPLKFQSMLTDFKAQAEALIKLANNRDGLLTCALRSSIV 192
Query: 206 FGPGDT-IVPHLLSHWRT---MFIIGDGMNCDDFVYVENVVHGHICAEKTLSTK 255
FGPGDT VP L++ ++ FI+G G N DF Y ENV H HICA K L ++
Sbjct: 193 FGPGDTEFVPFLVNLAKSGYAKFILGSGENISDFTYSENVSHAHICAVKALDSQ 246
>AT2G33630.1 | chr2:14236951-14238734 REVERSE LENGTH=481
Length = 480
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 127/259 (49%), Gaps = 35/259 (13%)
Query: 28 VTGGRGFMARHLVAALLRSGEWRVRITDLAPAITLDPVEEKGLLGEALRDGHAVYDSVNV 87
VTGG GF+ L L+R G +VR DL + L++ +V
Sbjct: 16 VTGGLGFVGAALCLELVRRGARQVRSFDL---------RHSSPWSDDLKNSGVRCIQGDV 66
Query: 88 CDITQLTKAFQGVEVVFHTAA---ADPDINDFQLHYKVNVEGTKNVIDACVTCKVKRLIY 144
+ A G + V H A+ + ++ F +VN+ GT NV++A ++ R++Y
Sbjct: 67 TKKQDVDNALDGADCVLHLASYGMSGKEMLRFGRCDEVNINGTCNVLEAAFKHEITRIVY 126
Query: 145 TSSSGVVFDGVHGLFDVDESMPYPNKFP-----DAYAQSKAEAEKLVRNSNGIC------ 193
S+ VVF G + + +E +PY FP DAY+++K+ AE+LV SNG
Sbjct: 127 VSTYNVVFGGKE-ILNGNEGLPY---FPLDDHVDAYSRTKSIAEQLVLKSNGRPFKNGGK 182
Query: 194 ELLTCSIRPGSIFGPG-DTIVPHLLSHWR---TMFIIGDGMNCDDFVYVENVVHGHICAE 249
+ TC+IRP +I+GPG D +P +++ + +F IG+ D++YVEN+V I A
Sbjct: 183 RMYTCAIRPAAIYGPGEDRHLPRIVTLTKLGLALFKIGEPSVKSDWIYVENLVLAIILAS 242
Query: 250 KTL----STKEGSKISGGK 264
L +EG ++ G+
Sbjct: 243 MGLLDDIPGREGQPVAAGQ 261
>AT4G33360.1 | chr4:16067989-16069374 REVERSE LENGTH=345
Length = 344
Score = 74.3 bits (181), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 113/261 (43%), Gaps = 56/261 (21%)
Query: 13 GRRLQEEEPAARWCAVTGGRGFMARHLVAALLRSGEWRVR--------ITDLAPAITLDP 64
G ++ E VTG G++ L LLR G VR ++DL P + L
Sbjct: 2 GPKMPNTETENMKILVTGSTGYLGARLCHVLLRRGH-SVRALVRRTSDLSDLPPEVEL-- 58
Query: 65 VEEKGLLGEALRDGHAVYDSVNVCDITQLTKAFQGVEVVFHTAA-ADPDINDFQLHYKVN 123
Y +V D LT A G ++VFH AA +P + D VN
Sbjct: 59 ----------------AYG--DVTDYRSLTDACSGCDIVFHAAALVEPWLPDPSRFISVN 100
Query: 124 VEGTKNVIDACVTCK-VKRLIYTSSSGVVFDGVHGLFDVDESMPYPNK------FPDAYA 176
V G KNV++A K V+++IYTSS L D S+ N+ F Y
Sbjct: 101 VGGLKNVLEAVKETKTVQKIIYTSS-------FFALGSTDGSVANENQVHNERFFCTEYE 153
Query: 177 QSKAEAEKLVRN--SNGICELLTCSIRPGSIFGPGDTIVPHLLSHW-------RTMFIIG 227
+SKA A+K+ N S G+ +L + PG IFGPG ++++ R IG
Sbjct: 154 RSKAVADKMALNAASEGVPIIL---LYPGVIFGPGKLTSANMVARMLIERFNGRLPGYIG 210
Query: 228 DGMNCDDFVYVENVVHGHICA 248
G + F +V++VV GH+ A
Sbjct: 211 SGTDRYSFSHVDDVVEGHVAA 231
>AT1G78570.1 | chr1:29550110-29552207 FORWARD LENGTH=670
Length = 669
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 108/233 (46%), Gaps = 31/233 (13%)
Query: 28 VTGGRGFMARHLVAALLRS-GEWRVRITD----LAPAITLDPVEEKGLLGEALRDGHAVY 82
+TG GF+A H+ L+RS ++++ + D + L+P + + ++ A
Sbjct: 11 ITGAAGFIASHVANRLIRSYPDYKIVVLDKLDYCSNLKNLNPSKHSPNF-KFVKGDIASA 69
Query: 83 DSVNVCDITQLTKAFQGVEVVFHTAAADPDINDFQLHY---KVNVEGTKNVIDAC-VTCK 138
D VN IT +G++ + H AA N F + K N+ GT +++AC VT +
Sbjct: 70 DLVNHLLIT------EGIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQ 123
Query: 139 VKRLIYTSSSGVV----FDGVHGLFDVDESMPYPNKFPDAYAQSKAEAEKLVRNSNGICE 194
++R I+ S+ V D + G + + +P + Y+ +KA AE LV
Sbjct: 124 IRRFIHVSTDEVYGETDEDALVGNHEASQLLP-----TNPYSATKAGAEMLVMAYGRSYG 178
Query: 195 LLTCSIRPGSIFGPG---DTIVPH---LLSHWRTMFIIGDGMNCDDFVYVENV 241
L + R +++GP + ++P L + + I GDG N ++Y E+V
Sbjct: 179 LPVITTRGNNVYGPNQFPEKLIPKFILLAMRGQVLPIHGDGSNVRSYLYCEDV 231
>AT1G80820.1 | chr1:30370646-30372460 FORWARD LENGTH=333
Length = 332
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 61/127 (48%), Gaps = 11/127 (8%)
Query: 28 VTGGRGFMARHLVAALLRSGEWRVRITDLAPAITLDPVEE--KGLLGEALRDGHAVYDSV 85
VTG G++A +V LL G + VR T P DP + L G R S
Sbjct: 10 VTGAGGYIASWIVKLLLERG-YTVRGTVRNPT---DPKNNHLRELQGAKER---LTLHSA 62
Query: 86 NVCDITQLTKAFQGVEVVFHTAAADPDINDFQLHYKVNVEGTKNVIDACVTCKVKRLIYT 145
++ D L G + VFHTA+ P +D + + V G K VIDA KVKR+++T
Sbjct: 63 DLLDYEALCATIDGCDGVFHTAS--PMTDDPETMLEPAVNGAKFVIDAAAKAKVKRVVFT 120
Query: 146 SSSGVVF 152
SS G V+
Sbjct: 121 SSIGAVY 127
>AT3G14790.1 | chr3:4964791-4966875 FORWARD LENGTH=665
Length = 664
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 109/233 (46%), Gaps = 31/233 (13%)
Query: 28 VTGGRGFMARHLVAALLRS-GEWRVRITD----LAPAITLDPVEEKGLLGEALRDGHAVY 82
+TG GF+A H+ L+RS ++++ + D + L+P + + ++ A
Sbjct: 11 ITGAAGFIASHVANRLVRSYPDYKIVVLDKLDYCSNLKNLNPSKSSPNF-KFVKGDIASA 69
Query: 83 DSVNVCDITQLTKAFQGVEVVFHTAAADPDINDFQLHY---KVNVEGTKNVIDAC-VTCK 138
D VN IT + ++ + H AA N F + K N+ GT +++AC VT +
Sbjct: 70 DLVNYLLIT------EEIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQ 123
Query: 139 VKRLIYTSSSGVVFDGVHGLFDVDESM---PYPNKFP-DAYAQSKAEAEKLVRNSNGICE 194
++R I+ S+ D V+G D D S+ P + Y+ +KA AE LV
Sbjct: 124 IRRFIHVST-----DEVYGETDEDASVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYG 178
Query: 195 LLTCSIRPGSIFGPG---DTIVPHLL---SHWRTMFIIGDGMNCDDFVYVENV 241
L + R +++GP + ++P + + + + I GDG N ++Y E+V
Sbjct: 179 LPVITTRGNNVYGPNQFPEKLIPKFILLAMNGKPLPIHGDGSNVRSYLYCEDV 231
>AT1G15950.1 | chr1:5478855-5481915 FORWARD LENGTH=345
Length = 344
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 63/134 (47%), Gaps = 11/134 (8%)
Query: 21 PAARWCAVTGGRGFMARHLVAALLRSGEWRVRITDLAPAITLDPVEEKGLLGEALRDGHA 80
PA + VTG G++A +V LL G + V+ T +P + K L G
Sbjct: 8 PAGKTVCVTGAGGYIASWIVKILLERG-YTVKGT------VRNPDDPKNTHLRELEGGKE 60
Query: 81 --VYDSVNVCDITQLTKAFQGVEVVFHTAAADPDINDFQLHYKVNVEGTKNVIDACVTCK 138
+ ++ D L A G + VFHTA+ P +D + + V G K VI+A K
Sbjct: 61 RLILCKADLQDYEALKAAIDGCDGVFHTAS--PVTDDPEQMVEPAVNGAKFVINAAAEAK 118
Query: 139 VKRLIYTSSSGVVF 152
VKR++ TSS G V+
Sbjct: 119 VKRVVITSSIGAVY 132
>AT1G68540.1 | chr1:25720066-25721282 FORWARD LENGTH=322
Length = 321
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 103/248 (41%), Gaps = 43/248 (17%)
Query: 28 VTGGRGFMARHLVAALLRSGEWRVRITDLAPAITLDPVEEKGLLGEALRDGHAVYDSVNV 87
VTGG GF+A +++ +LL G VR T P E+ G L E G +
Sbjct: 6 VTGGTGFIASYIIKSLLELGH-TVRTTVRNPRDE----EKVGFLWEF--QGAKQRLKILQ 58
Query: 88 CDIT---QLTKAFQGVEVVFHTAA---ADPDINDFQLHYKVNVEGTKNVIDACVTCK--V 139
D+T +A GV+ VFHTA+ D N + ++GT NV+ +C K +
Sbjct: 59 ADLTVEGSFDEAVNGVDGVFHTASPVLVPQDHNIQETLVDPIIKGTTNVMSSCAKSKATL 118
Query: 140 KRLIYTSSSGVVFDGVHGLFDVDESMP----------YPNKFPDAYAQSKAEAEKLVRNS 189
KR++ TSS + FD E+ P Y +F Y +K E R +
Sbjct: 119 KRIVLTSSCS----SIRYRFDATEASPLNESHWSDPEYCKRFNLWYGYAKTLGE---REA 171
Query: 190 NGICE---LLTCSIRPGSIFGPGDTIVPHLLSHWRTMFIIGDGMNCD------DFVYVEN 240
I E L + P + GP + P S + I G+ + FV++++
Sbjct: 172 WRIAEEKGLDLVVVNPSFVVGP--LLGPKPTSTLLMILAIAKGLAGEYPNFTVGFVHIDD 229
Query: 241 VVHGHICA 248
VV H+ A
Sbjct: 230 VVAAHVLA 237
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.320 0.136 0.420
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 6,319,103
Number of extensions: 271382
Number of successful extensions: 650
Number of sequences better than 1.0e-05: 10
Number of HSP's gapped: 649
Number of HSP's successfully gapped: 10
Length of query: 266
Length of database: 11,106,569
Length adjustment: 97
Effective length of query: 169
Effective length of database: 8,447,217
Effective search space: 1427579673
Effective search space used: 1427579673
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 111 (47.4 bits)