BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0400200 Os03g0400200|Os03g0400200
(177 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G22900.1 | chr1:8103910-8104491 REVERSE LENGTH=194 76 8e-15
AT5G42500.1 | chr5:16994359-16994916 REVERSE LENGTH=186 74 5e-14
AT5G42510.1 | chr5:16998268-16998816 REVERSE LENGTH=183 73 6e-14
AT1G65870.1 | chr1:24503624-24504193 FORWARD LENGTH=190 71 3e-13
AT2G21110.1 | chr2:9050290-9050850 REVERSE LENGTH=187 63 9e-11
AT2G21100.1 | chr2:9048687-9049336 REVERSE LENGTH=188 58 2e-09
AT4G38700.1 | chr4:18076583-18077155 REVERSE LENGTH=191 57 6e-09
AT5G49040.1 | chr5:19882676-19883251 REVERSE LENGTH=192 55 1e-08
AT1G55210.1 | chr1:20598057-20598620 REVERSE LENGTH=188 55 2e-08
AT3G13660.1 | chr3:4465135-4465512 FORWARD LENGTH=126 50 9e-07
AT3G13650.1 | chr3:4463056-4463616 FORWARD LENGTH=187 49 1e-06
AT3G13662.1 | chr3:4467090-4468470 FORWARD LENGTH=174 49 2e-06
AT1G58170.1 | chr1:21536188-21536745 FORWARD LENGTH=186 48 2e-06
AT2G39430.1 | chr2:16463422-16464390 FORWARD LENGTH=323 46 8e-06
>AT1G22900.1 | chr1:8103910-8104491 REVERSE LENGTH=194
Length = 193
Score = 76.3 bits (186), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 68/127 (53%), Gaps = 9/127 (7%)
Query: 30 HLHFYIHETFAGDNATTASLAPSPLAVAGSNSS---FGSVGALDDELREGSDAASRYLGR 86
HLHFY H+ +GD TT +A +P G+NSS FG+V +D + EG + +S+ +GR
Sbjct: 52 HLHFYFHDIISGDKPTTIRVAEAP----GTNSSATVFGAVLIVDAPVTEGPELSSKEVGR 107
Query: 87 VEGLVVQADLGNPXXXXXXXXXXXXGGDYNGSTLVLDGRVDFGAAGDMERAVVGGTGRFR 146
+GL D+ G++NGST L GR + E ++GGTG FR
Sbjct: 108 AQGLYASTDMKT-FGFTMVFNFVFTEGEFNGSTAALYGRNPI-LLEERELPIIGGTGDFR 165
Query: 147 RARGYSL 153
ARGY+L
Sbjct: 166 FARGYAL 172
>AT5G42500.1 | chr5:16994359-16994916 REVERSE LENGTH=186
Length = 185
Score = 73.6 bits (179), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 65/124 (52%), Gaps = 5/124 (4%)
Query: 30 HLHFYIHETFAGDNATTASLAPSPLAVAGSNSSFGSVGALDDELREGSDAASRYLGRVEG 89
HLHFY H+ +GD T +A + SN +FG + DD L EG D +S+ +GR +G
Sbjct: 44 HLHFYFHDVISGDKPTAVKVAEA-RRTNSSNVNFGVIMIADDPLTEGPDPSSKEVGRAQG 102
Query: 90 LVVQADLGNPXXXXXXXXXXXXGGDYNGSTLVLDGRVD-FGAAGDMERAVVGGTGRFRRA 148
+ + N G++NGST+ + GR + F +M ++GGTG FR A
Sbjct: 103 MYALTAMKN-ISFTMVFNLAFTAGEFNGSTVAMYGRNEIFSKVREM--PIIGGTGAFRFA 159
Query: 149 RGYS 152
RGY+
Sbjct: 160 RGYA 163
>AT5G42510.1 | chr5:16998268-16998816 REVERSE LENGTH=183
Length = 182
Score = 73.2 bits (178), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 63/124 (50%), Gaps = 3/124 (2%)
Query: 30 HLHFYIHETFAGDNATTASLAPSPLAVAGSNSSFGSVGALDDELREGSDAASRYLGRVEG 89
HLHFY H+ +GD T +A + N FG + DD L EG D +S+ +GR +G
Sbjct: 41 HLHFYFHDVISGDKPTAVKVAEA-RPTTTLNVKFGVIMIADDPLTEGPDPSSKEVGRAQG 99
Query: 90 LVVQADLGNPXXXXXXXXXXXXGGDYNGSTLVLDGRVDFGAAGDMERAVVGGTGRFRRAR 149
+ + + G++NGST+ + GR D + E ++GGTG FR AR
Sbjct: 100 MYASTAMKD-IVFTMVFNYVFTAGEFNGSTIAVYGRNDIFSKVR-ELPIIGGTGAFRFAR 157
Query: 150 GYSL 153
GY+L
Sbjct: 158 GYAL 161
>AT1G65870.1 | chr1:24503624-24504193 FORWARD LENGTH=190
Length = 189
Score = 71.2 bits (173), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 71/145 (48%), Gaps = 4/145 (2%)
Query: 30 HLHFYIHETFAGDNATTASLAPSPLAVAGSNSSFGSVGALDDELREGSDAASRYLGRVEG 89
HLHFY H+ +GD T+ +A P S + FG V +DD+L G + S +GR +G
Sbjct: 46 HLHFYFHDIVSGDKPTSVQVANGP-TTNSSATGFGLVAVVDDKLTVGPEITSEEVGRAQG 104
Query: 90 LVVQADLGNPXXXXXXXXXXXXGGDYNGSTLVLDGRVDFGAAGDMERAVVGGTGRFRRAR 149
+ AD N G ++ ST+ + GR + + E ++GGTG FR R
Sbjct: 105 MYASAD-QNKLGLLMAFNLVFTKGKFSDSTVAMYGR-NPVLSKVREMPIIGGTGAFRFGR 162
Query: 150 GYSL-MTKFGNPTPNTGVFEMDVYV 173
GY+L T N T V E +VY+
Sbjct: 163 GYALAKTLVFNITSGDAVVEYNVYI 187
>AT2G21110.1 | chr2:9050290-9050850 REVERSE LENGTH=187
Length = 186
Score = 62.8 bits (151), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/147 (34%), Positives = 68/147 (46%), Gaps = 8/147 (5%)
Query: 30 HLHFYIHETFAGDNATTASLAPSPLAVAGSNSS----FGSVGALDDELREGSDAASRYLG 85
+LHF+ H+T N + A L P G N S FGS+ ALDD L G D S +G
Sbjct: 38 NLHFFFHDTLTAPNPS-AILIAKPTHTRGDNDSSPSPFGSLFALDDPLTVGPDPKSEKIG 96
Query: 86 RVEGLVVQADLGNPXXXXXXXXXXXXGGDYNGSTLVLDGRVDFGAAGDMERAVVGGTGRF 145
G+ V + P G +NGS++ + R + E AVVGG GRF
Sbjct: 97 NARGMYVSSGKHVP-TLTMYVDFGFTSGKFNGSSIAVFSRNTI-TEKEREVAVVGGRGRF 154
Query: 146 RRARGYS-LMTKFGNPTPNTGVFEMDV 171
R ARG + L T + N T + E +V
Sbjct: 155 RMARGVAQLNTYYVNLTNGDAIVEYNV 181
>AT2G21100.1 | chr2:9048687-9049336 REVERSE LENGTH=188
Length = 187
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 62/127 (48%), Gaps = 9/127 (7%)
Query: 30 HLHFYIHETFAGDNATTASLAPSPLAVAGSNSSFGSVGALDDELREGSDAASRYLGRVEG 89
+L FY H+T +G N T +A S + FG+V +DD L E +D S+ +GR +G
Sbjct: 44 NLQFYFHDTLSGKNPTAVKVAQGT-DTEKSPTLFGAVFMVDDALTETADPKSKLVGRAQG 102
Query: 90 LV---VQADLGNPXXXXXXXXXXXXGGDYNGSTLVLDGRVDFGAAGDMERAVVGGTGRFR 146
L + ++G G Y ST+ + G+ + E +VGGTG FR
Sbjct: 103 LYGSSCKEEVG----LIMAMSFCFEDGPYKDSTISMIGK-NSAMNPIREMPIVGGTGMFR 157
Query: 147 RARGYSL 153
ARGY++
Sbjct: 158 MARGYAI 164
>AT4G38700.1 | chr4:18076583-18077155 REVERSE LENGTH=191
Length = 190
Score = 56.6 bits (135), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 64/126 (50%), Gaps = 7/126 (5%)
Query: 31 LHFYIHETFAGDNATTASLAPSPLAVAGSNS--SFGSVGALDDELREGSDAASRYLGRVE 88
+ FY+H+T +G N T +A + L GS S FGS+ +DD L G + S+ +G +
Sbjct: 41 VRFYLHDTLSGQNPTAVRIAHANLT-GGSASPVGFGSLFVIDDPLTVGPEKHSKEIGNGQ 99
Query: 89 GLVVQ--ADLGNPXXXXXXXXXXXXGGDYNGSTLVLDGRVDFGA-AGDMERAVVGGTGRF 145
G+ V DL + G +NGS++ + R G+ E A+VGG G+F
Sbjct: 100 GMYVSGCKDL-SKFTIVMYADLAFTAGKFNGSSISIFSRNPVAEEVGEREIAIVGGRGKF 158
Query: 146 RRARGY 151
R ARG+
Sbjct: 159 RMARGF 164
>AT5G49040.1 | chr5:19882676-19883251 REVERSE LENGTH=192
Length = 191
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 61/125 (48%), Gaps = 9/125 (7%)
Query: 30 HLHFYIHETFAGDNATTASLAPSPLAVAGSNSSFGSVGALDDELREGSDAASRYLGRVEG 89
HL Y H+ G N ++ + P+A S+S FGS+ +D+ L S +G+ +G
Sbjct: 47 HLRVYWHDIVTGRNPSSIRI-QGPVAKYSSSSYFGSITMIDNALTLDVPINSTVVGQAQG 105
Query: 90 LVV---QADLGNPXXXXXXXXXXXXGGDYNGSTLVLDGRVDFGAAGDMERAVVGGTGRFR 146
+ V Q ++G G YNGST+ + GR + + E VVGG+G FR
Sbjct: 106 MYVGAAQKEIG----LLMAMNLAFKTGKYNGSTITILGR-NTVMSKVREMPVVGGSGMFR 160
Query: 147 RARGY 151
ARGY
Sbjct: 161 FARGY 165
>AT1G55210.1 | chr1:20598057-20598620 REVERSE LENGTH=188
Length = 187
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 66/148 (44%), Gaps = 13/148 (8%)
Query: 30 HLHFYIHETFAGDNATTASLAPSPLAVAGSNSSFGSVGALDDELREGSDAASRYLGRVEG 89
H Y H+ +G N T+ + P P+ ++S FG++ +D+ L S LG+ +G
Sbjct: 46 HFKVYWHDILSGPNPTSIMIQP-PVT---NSSYFGAISMIDNALTAKVPMNSTVLGQAQG 101
Query: 90 L---VVQADLGNPXXXXXXXXXXXXGGDYNGSTLVLDGRVDFGAAGDMERAVVGGTGRFR 146
Q +LG G YNGST+ + GR + + E +VGG+G FR
Sbjct: 102 FYAGAAQKELG----FLMAMNFAFKTGKYNGSTITILGR-NTALSEVREMPIVGGSGLFR 156
Query: 147 RARGY-SLMTKFGNPTPNTGVFEMDVYV 173
ARGY TK+ N E YV
Sbjct: 157 FARGYVEARTKWINLKNGDATVEYSCYV 184
>AT3G13660.1 | chr3:4465135-4465512 FORWARD LENGTH=126
Length = 125
Score = 49.7 bits (117), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 58/124 (46%), Gaps = 11/124 (8%)
Query: 55 AVAGSNSSFGSVGALDDELREGSDAASRYLGRVEGL---VVQADLGNPXXXXXXXXXXXX 111
AV+ S++SFGS+ D+ L S +G+ +G Q +LG
Sbjct: 5 AVSNSSTSFGSITMTDNALTSDVPVNSTVVGQSQGFYAGAAQRELG----FLMAMNFAFK 60
Query: 112 GGDYNGSTLVLDGR-VDFGAAGDMERAVVGGTGRFRRARGY-SLMTKFGNPTPNTGVFEM 169
G YNGST+ + GR F +M VVGG+G FR ARGY TK+ +P E
Sbjct: 61 TGKYNGSTITILGRNTVFSKVREM--TVVGGSGIFRLARGYVEARTKWFDPKTGDATVEY 118
Query: 170 DVYV 173
+ YV
Sbjct: 119 NCYV 122
>AT3G13650.1 | chr3:4463056-4463616 FORWARD LENGTH=187
Length = 186
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 57/123 (46%), Gaps = 8/123 (6%)
Query: 30 HLHFYIHETFAGDNATTASLAPSPLAVAGSNSSF-GSVGALDDELREGSDAASRYLGRVE 88
H Y H+ +G N ++ + P P+ SNSSF GSV +D+ L S +G+ +
Sbjct: 45 HFRVYWHDILSGSNPSSVVINP-PI----SNSSFFGSVTVIDNRLTTEVAVNSTLVGQAQ 99
Query: 89 GLVVQADLGNPXXXXXXXXXXXXGGDYNGSTLVLDGRVDFGAAGDMERAVVGGTGRFRRA 148
G + A G YNGS++ + GR + E V+GG+G FR A
Sbjct: 100 G-IYAATGQRDASALMVMNFAFKTGKYNGSSIAILGR-NAVLTKVREMPVIGGSGLFRFA 157
Query: 149 RGY 151
RGY
Sbjct: 158 RGY 160
>AT3G13662.1 | chr3:4467090-4468470 FORWARD LENGTH=174
Length = 173
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 56/123 (45%), Gaps = 8/123 (6%)
Query: 30 HLHFYIHETFAGDNATTASLAPSPLAVAGSNSSF-GSVGALDDELREGSDAASRYLGRVE 88
HL Y H + G N ++ + L NSS GS+ +DD L + +G+ +
Sbjct: 44 HLRVYWHNSVNGRNPSSVMIQQPVL-----NSSLSGSITMMDDPLTFDVPRNATVVGQAQ 98
Query: 89 GLVVQADLGNPXXXXXXXXXXXXGGDYNGSTLVLDGRVDFGAAGDMERAVVGGTGRFRRA 148
G+ V A G G YNGST+ + GR + + E VVGG+G FR A
Sbjct: 99 GMYVAAAQGEIGFLMVMNFAFTTG-KYNGSTITILGR-NVVMSKVREMPVVGGSGIFRFA 156
Query: 149 RGY 151
RGY
Sbjct: 157 RGY 159
>AT1G58170.1 | chr1:21536188-21536745 FORWARD LENGTH=186
Length = 185
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 59/126 (46%), Gaps = 11/126 (8%)
Query: 30 HLHFYIHETFAGDNATTASLAPSPLAVAGSNSSFGSVGALDDELREGSDAASRYLGRVEG 89
H Y H+ G ++++ S+ P G+ + FG + +D+ L +S+ +GR +G
Sbjct: 41 HFRVYWHDIVTGQDSSSVSIMNPPKKYTGA-TGFGLMRMIDNPLTLTPKLSSKMVGRAQG 99
Query: 90 LVV---QADLGNPXXXXXXXXXXXXGGDYNGSTLVLDGRVD-FGAAGDMERAVVGGTGRF 145
+ ++G G YNGST+ + GR F +M V+GG+G F
Sbjct: 100 FYAGTSKEEIG----LLMAMNFAILDGKYNGSTITVLGRNSVFDKVREM--PVIGGSGLF 153
Query: 146 RRARGY 151
R ARGY
Sbjct: 154 RFARGY 159
>AT2G39430.1 | chr2:16463422-16464390 FORWARD LENGTH=323
Length = 322
Score = 46.2 bits (108), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 47/102 (46%), Gaps = 8/102 (7%)
Query: 63 FGSVGALDDELREGSDAASRYLGRVEGLVVQADLGNPXXXXXXXXXXXXGGDYNGSTLVL 122
FG++ +DDEL E + S +GR +G + + L D + + L
Sbjct: 200 FGTITVVDDELTESHELGSAVIGRAQGFYLASSLDGTSQTLSLTVLLHGEHDQHDT---L 256
Query: 123 DGRVDF-----GAAGDMERAVVGGTGRFRRARGYSLMTKFGN 159
D + F A+ + AV+GGTG+F A+GY+++ N
Sbjct: 257 DDAISFFGVHRTASHASQIAVIGGTGKFEHAKGYAIVETLHN 298
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.317 0.136 0.399
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 3,235,121
Number of extensions: 115266
Number of successful extensions: 286
Number of sequences better than 1.0e-05: 16
Number of HSP's gapped: 265
Number of HSP's successfully gapped: 16
Length of query: 177
Length of database: 11,106,569
Length adjustment: 92
Effective length of query: 85
Effective length of database: 8,584,297
Effective search space: 729665245
Effective search space used: 729665245
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 108 (46.2 bits)