BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0397400 Os03g0397400|AK069928
(437 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G55730.1 | chr1:20831387-20833941 REVERSE LENGTH=442 563 e-161
AT3G13320.1 | chr3:4315418-4317997 FORWARD LENGTH=442 554 e-158
AT1G55720.1 | chr1:20828118-20830595 REVERSE LENGTH=468 525 e-149
AT5G01490.1 | chr5:195589-198465 FORWARD LENGTH=455 337 6e-93
AT2G38170.3 | chr2:15990113-15993178 REVERSE LENGTH=476 323 9e-89
AT3G51860.1 | chr3:19239458-19242519 FORWARD LENGTH=460 323 1e-88
>AT1G55730.1 | chr1:20831387-20833941 REVERSE LENGTH=442
Length = 441
Score = 563 bits (1450), Expect = e-161, Method: Compositional matrix adjust.
Identities = 283/396 (71%), Positives = 325/396 (82%), Gaps = 3/396 (0%)
Query: 42 GSLAAVAESLSTGSKWRRALTSVRVVILQAKINVLLPFGPLAVMLHYLSANHQGWVFLFS 101
GSL+A ST + L S ++VIL K+N+LLPFGPLA++LHYL+ N +GW+FL S
Sbjct: 46 GSLSASFRECSTKTPNNSVLQSFKIVILSNKLNLLLPFGPLAILLHYLTDN-KGWIFLLS 104
Query: 102 LIGITPLAERLGYATEQLALYTGPTIGGLLNATFGNATEMIISLYALKNGMIRVVQQSLL 161
L+GITPLAERLGYATEQLA YTG T+GGLLNATFGN TE+IIS++ALK+GMIRVVQ +LL
Sbjct: 105 LVGITPLAERLGYATEQLACYTGSTVGGLLNATFGNVTELIISIFALKSGMIRVVQLTLL 164
Query: 162 GSILSNMLLVLGCAFFAGGLVHPSRDQVFNKASAVVNSGLLLMAVLGLMFPAVLHFTHSE 221
GSILSNMLLVLGCAFF GGLV ++QVF+K +AVVNSGLLLMAV+GL+FPAVLH+THSE
Sbjct: 165 GSILSNMLLVLGCAFFCGGLVFSQKEQVFDKGNAVVNSGLLLMAVMGLLFPAVLHYTHSE 224
Query: 222 VQYGKSEVSLSRFSSCIMLVAYASYLFFQLKSQRSLYSPXXXXXXXXXXXXXXXXXXXXX 281
V G SE++LSRFSSCIMLVAYA+YLFFQLKSQ S Y+P
Sbjct: 225 VHAGSSELALSRFSSCIMLVAYAAYLFFQLKSQPSSYTPLTEETNQNEETSDDDEDPEIS 284
Query: 282 X--AICWLFVLTIWISILSGYLVDAIQGASESLNMPVAFISVILLPIVGNAAEHASAIMF 339
AI WL +LT W+S+LSGYLVDAI+GAS S +P++FISVILLPIVGNAAEHA AIMF
Sbjct: 285 KWEAIIWLSILTAWVSLLSGYLVDAIEGASVSWKIPISFISVILLPIVGNAAEHAGAIMF 344
Query: 340 AMKDKLDITLGVAIGSSTQISMFVIPFCVVIGWIMGQQMDLNFQLFETATLFITVLVVAF 399
AMKDKLD++LGVAIGSS QISMF +PFCVVIGW+MG QMDLNFQLFETATLFITV+VVAF
Sbjct: 345 AMKDKLDLSLGVAIGSSIQISMFAVPFCVVIGWMMGAQMDLNFQLFETATLFITVIVVAF 404
Query: 400 MLQEGTSNYFKGLMLILCYLIVAASFFVHVDPDSSN 435
LQEGTSNYFKGLMLILCYLIVAASFFVH DP +
Sbjct: 405 FLQEGTSNYFKGLMLILCYLIVAASFFVHEDPHQDD 440
>AT3G13320.1 | chr3:4315418-4317997 FORWARD LENGTH=442
Length = 441
Score = 554 bits (1427), Expect = e-158, Method: Compositional matrix adjust.
Identities = 276/392 (70%), Positives = 320/392 (81%), Gaps = 3/392 (0%)
Query: 42 GSLAAVAESLSTGSKWRRALTSVRVVILQAKINVLLPFGPLAVMLHYLSANHQGWVFLFS 101
GSL+ + + L S+++VI K+N+LLPFGPLA+++HY+ + +GWVFL +
Sbjct: 46 GSLSTSFPQHTPKAPKNSVLNSIKIVIFCNKLNLLLPFGPLAILVHYM-IDSKGWVFLLT 104
Query: 102 LIGITPLAERLGYATEQLALYTGPTIGGLLNATFGNATEMIISLYALKNGMIRVVQQSLL 161
L+GITPLAERLGYATEQLA YTGPT+GGLLNATFGN TE+IIS++ALKNGMIRVVQ +LL
Sbjct: 105 LVGITPLAERLGYATEQLACYTGPTVGGLLNATFGNVTELIISIFALKNGMIRVVQLTLL 164
Query: 162 GSILSNMLLVLGCAFFAGGLVHPSRDQVFNKASAVVNSGLLLMAVLGLMFPAVLHFTHSE 221
GSILSNMLLVLGCAFF GGLV +DQVF+K A VNSGLLLMAV+G++FPAVLH+THSE
Sbjct: 165 GSILSNMLLVLGCAFFCGGLVFYQKDQVFDKGIATVNSGLLLMAVMGILFPAVLHYTHSE 224
Query: 222 VQYGKSEVSLSRFSSCIMLVAYASYLFFQLKSQRSLYSPXXXXXXXXXXXXXXXXXXXXX 281
V G SE++LSRFSSCIML+AYA+YLFFQLKSQ + YSP
Sbjct: 225 VHAGSSELALSRFSSCIMLIAYAAYLFFQLKSQSNSYSPLDEESNQNEETSAEDEDPEIS 284
Query: 282 X--AICWLFVLTIWISILSGYLVDAIQGASESLNMPVAFISVILLPIVGNAAEHASAIMF 339
AI WL +LT W+S+LSGYLVDAI+GAS S N+P+AFIS ILLPIVGNAAEHA AIMF
Sbjct: 285 KWEAIIWLSILTAWVSLLSGYLVDAIEGASVSWNIPIAFISTILLPIVGNAAEHAGAIMF 344
Query: 340 AMKDKLDITLGVAIGSSTQISMFVIPFCVVIGWIMGQQMDLNFQLFETATLFITVLVVAF 399
AMKDKLD++LGVAIGSS QISMF +PFCVVIGW+MGQQMDLNFQLFETA LFITV+VVAF
Sbjct: 345 AMKDKLDLSLGVAIGSSIQISMFAVPFCVVIGWMMGQQMDLNFQLFETAMLFITVIVVAF 404
Query: 400 MLQEGTSNYFKGLMLILCYLIVAASFFVHVDP 431
LQEG+SNYFKGLMLILCYLIVAASFFVH DP
Sbjct: 405 FLQEGSSNYFKGLMLILCYLIVAASFFVHEDP 436
>AT1G55720.1 | chr1:20828118-20830595 REVERSE LENGTH=468
Length = 467
Score = 525 bits (1351), Expect = e-149, Method: Compositional matrix adjust.
Identities = 267/389 (68%), Positives = 310/389 (79%), Gaps = 10/389 (2%)
Query: 56 KWRRA-------LTSVRVVILQAKINVLLPFGPLAVMLHYLSANHQGWVFLFSLIGITPL 108
+ RRA + S ++VIL K+N+LLPFGPLA+++HYL+ N +GW FL SL+GITPL
Sbjct: 64 RERRAKAPRNSVVQSFKIVILSNKLNLLLPFGPLAILVHYLTDN-KGWFFLLSLVGITPL 122
Query: 109 AERLGYATEQLALYTGPTIGGLLNATFGNATEMIISLYALKNGMIRVVQQSLLGSILSNM 168
AERLGYATEQL+ YTG T+GGLLNATFGN E+IIS+ ALKNGMIRVVQ +LLGSILSN+
Sbjct: 123 AERLGYATEQLSCYTGATVGGLLNATFGNVIELIISIIALKNGMIRVVQLTLLGSILSNI 182
Query: 169 LLVLGCAFFAGGLVHPSRDQVFNKASAVVNSGLLLMAVLGLMFPAVLHFTHSEVQYGKSE 228
LLVLGCAFF GGLV P +DQVF+K +AVV+SG+LLMAV+GL+FP LH+THSEV G SE
Sbjct: 183 LLVLGCAFFCGGLVFPGKDQVFDKRNAVVSSGMLLMAVMGLLFPTFLHYTHSEVHAGSSE 242
Query: 229 VSLSRFSSCIMLVAYASYLFFQLKSQRSLYSPXXXXXXXXXXXXXXXXXXXXXXAICWLF 288
++LSRF SCIMLVAYA+YLFFQLKSQ S Y+ AI WL
Sbjct: 243 LALSRFISCIMLVAYAAYLFFQLKSQPSFYTE-KTNQNEETSNDDEDPEISKWEAIIWLS 301
Query: 289 VLTIWISILSGYLVDAIQGASESLNMPVAFISVILLPIVGNAAEHASAIMFAMKDKLDIT 348
+ T W+S+LSGYLVDAI+G S S +P++FISVILLPIVGNAAEHA AIMFAMKDKLD++
Sbjct: 302 IFTAWVSLLSGYLVDAIEGTSVSWKIPISFISVILLPIVGNAAEHAGAIMFAMKDKLDLS 361
Query: 349 LGVAIGSSTQISMFVIPFCVVIGWIMGQQMDLNFQLFETATLFITVLVVAFMLQ-EGTSN 407
LGVAIGSS QISMF +PFCVVIGW+MG QMDLN QLFETATL ITV+VVAF LQ EGTSN
Sbjct: 362 LGVAIGSSIQISMFAVPFCVVIGWMMGAQMDLNLQLFETATLLITVIVVAFFLQLEGTSN 421
Query: 408 YFKGLMLILCYLIVAASFFVHVDPDSSNN 436
YFK LMLILCYLIVAASFFVH DP +
Sbjct: 422 YFKRLMLILCYLIVAASFFVHEDPHQGTD 450
>AT5G01490.1 | chr5:195589-198465 FORWARD LENGTH=455
Length = 454
Score = 337 bits (865), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 180/391 (46%), Positives = 255/391 (65%), Gaps = 11/391 (2%)
Query: 56 KW---RRALTSVRVVILQAKINVLLPFGPLAVMLHYLSANHQGWVFLFSLIGITPLAERL 112
+W RR LT+++ V+L K+ +L P PLAV+ H + WVF SL+G+TPLAER+
Sbjct: 56 RWEFMRRILTNLQEVLLGTKLFILFPAVPLAVVAHRYDC-PRAWVFALSLLGLTPLAERI 114
Query: 113 GYATEQLALYTGPTIGGLLNATFGNATEMIISLYALKNGMIRVVQQSLLGSILSNMLLVL 172
+ TEQ+A +TGPT+GGL+NAT GNATEMII++ A+ +R+V+ SLLGSILSN+L VL
Sbjct: 115 SFLTEQIAFHTGPTVGGLMNATCGNATEMIIAILAVGQRKMRIVKLSLLGSILSNLLFVL 174
Query: 173 GCAFFAGGLVHPSRDQVFNKASAVVNSGLLLMAVLGLMFPAVLHFTHSEVQYGKSEVS-L 231
G + F GG+ + + Q F+ +NS LL +A+L P ++ FT +Y S+V L
Sbjct: 175 GTSLFLGGISNLRKHQSFDPRQGDMNSMLLYLALLCQTLPMIMRFTMEAEEYDGSDVVVL 234
Query: 232 SRFSSCIMLVAYASYLFFQL------KSQRSLYSPXXXXXXXXXXXXXXXXXXXXXXAIC 285
SR SS +ML+AY ++L F L L AI
Sbjct: 235 SRASSFVMLIAYLAFLIFHLFSSHLSPPPPPLPQREDVHDDDVSDKEEEGAVIGMWSAIF 294
Query: 286 WLFVLTIWISILSGYLVDAIQGASESLNMPVAFISVILLPIVGNAAEHASAIMFAMKDKL 345
WL ++T+ +++LS YLV IQ A++S + V FI +ILLPIVGNAAEHA A++FA ++KL
Sbjct: 295 WLIIMTLLVALLSDYLVSTIQDAADSWGLSVGFIGIILLPIVGNAAEHAGAVIFAFRNKL 354
Query: 346 DITLGVAIGSSTQISMFVIPFCVVIGWIMGQQMDLNFQLFETATLFITVLVVAFMLQEGT 405
DITLG+A+GS+TQI++FV+P V++ W MG +MDLNF L ETA +++LV + +LQ+GT
Sbjct: 355 DITLGIALGSATQIALFVVPVTVLVAWTMGIEMDLNFNLLETACFALSILVTSLVLQDGT 414
Query: 406 SNYFKGLMLILCYLIVAASFFVHVDPDSSNN 436
SNY KGL+L+LCY+++AA FFV P + N
Sbjct: 415 SNYMKGLVLLLCYVVIAACFFVSNSPSTETN 445
>AT2G38170.3 | chr2:15990113-15993178 REVERSE LENGTH=476
Length = 475
Score = 323 bits (829), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 175/378 (46%), Positives = 249/378 (65%), Gaps = 5/378 (1%)
Query: 61 LTSVRVVILQAKINVLLPFGPLAVMLHYLSANHQGWVFLFSLIGITPLAERLGYATEQLA 120
L++++ VIL K+ +L P P A++ Y + Q W+F SL+G+TPLAER+ + TEQLA
Sbjct: 63 LSNLQEVILGTKLAILFPAIPAAIICTYCGVS-QPWIFGLSLLGLTPLAERVSFLTEQLA 121
Query: 121 LYTGPTIGGLLNATFGNATEMIISLYALKNGMIRVVQQSLLGSILSNMLLVLGCAFFAGG 180
YTGPT+GGLLNAT GNATE+II++ AL N + VV+ SLLGSILSN+LLVLG + F GG
Sbjct: 122 FYTGPTLGGLLNATCGNATELIIAILALTNNKVAVVKYSLLGSILSNLLLVLGTSLFCGG 181
Query: 181 LVHPSRDQVFNKASAVVNSGLLLMAVLGLMFPAVLHFTH----SEVQYGKSEVSLSRFSS 236
+ + R+Q F++ A VN LLL+ L + P ++ + S ++S+SR S
Sbjct: 182 IANIRREQRFDRKQADVNFFLLLLGFLCHLLPLLVGYLKNGEASAAVLSDMQLSISRGFS 241
Query: 237 CIMLVAYASYLFFQLKSQRSLYSPXXXXXXXXXXXXXXXXXXXXXXAICWLFVLTIWISI 296
+ML++Y +YL FQL + R L+ WL +T+ I++
Sbjct: 242 IVMLISYIAYLVFQLWTHRQLFDAQEQEDEYDDDVEQETAVISFWSGFAWLVGMTLVIAL 301
Query: 297 LSGYLVDAIQGASESLNMPVAFISVILLPIVGNAAEHASAIMFAMKDKLDITLGVAIGSS 356
LS Y+V I+ AS+ N+ V+FIS+ILLPIVGNAAEHA A++FA K+KLDI+LGVA+GS+
Sbjct: 302 LSEYVVATIEEASDKWNLSVSFISIILLPIVGNAAEHAGAVIFAFKNKLDISLGVALGSA 361
Query: 357 TQISMFVIPFCVVIGWIMGQQMDLNFQLFETATLFITVLVVAFMLQEGTSNYFKGLMLIL 416
TQI +FV+P +++ WI+G MDLNF ET L +++++ AF LQ+G+S+Y KGL+L+L
Sbjct: 362 TQIGLFVVPLTIIVAWILGINMDLNFGPLETGCLAVSIIITAFTLQDGSSHYMKGLVLLL 421
Query: 417 CYLIVAASFFVHVDPDSS 434
CY I+A FFV P S
Sbjct: 422 CYFIIAICFFVDKLPQSE 439
>AT3G51860.1 | chr3:19239458-19242519 FORWARD LENGTH=460
Length = 459
Score = 323 bits (827), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 183/387 (47%), Positives = 258/387 (66%), Gaps = 13/387 (3%)
Query: 58 RRALTSVRVVILQAKINVLLPFGPLAVMLHYLSANH-QGWVFLFSLIGITPLAERLGYAT 116
+ L++++ VIL K+ +L PLA++ + S N+ + +F SLIG+TPLAER+ + T
Sbjct: 60 KNILSNLQEVILGTKLTLLFLAIPLAILAN--SYNYGRPLIFGLSLIGLTPLAERVSFLT 117
Query: 117 EQLALYTGPTIGGLLNATFGNATEMIISLYALKNGMIRVVQQSLLGSILSNMLLVLGCAF 176
EQLA YTGPT+GGLLNAT GNATE+II++ AL N + VV+ SLLGSILSN+LLVLG +
Sbjct: 118 EQLAFYTGPTVGGLLNATCGNATELIIAILALANNKVAVVKYSLLGSILSNLLLVLGTSL 177
Query: 177 FAGGLVHPSRDQVFNKASAVVN------SGLLLMAVLGLMFPAVLHFTHSEVQYGKSEVS 230
F GG+ + R+Q F++ A VN L + L L + A + S + K ++
Sbjct: 178 FFGGIANIRREQRFDRKQADVNFFLLLMGLLCHLLPLLLKYAATGEVSTSMIN--KMSLT 235
Query: 231 LSRFSSCIMLVAYASYLFFQLKSQRSLYSPXXXXXXXXXXXXXXXXXXXXX--XAICWLF 288
LSR SS +ML+AY +YL FQL + R L+ WL
Sbjct: 236 LSRTSSIVMLIAYIAYLIFQLWTHRQLFEAQQDDDDAYDDEVSVEETPVIGFWSGFAWLV 295
Query: 289 VLTIWISILSGYLVDAIQGASESLNMPVAFISVILLPIVGNAAEHASAIMFAMKDKLDIT 348
+TI I++LS Y+VD I+ AS+S + V+FIS+ILLPIVGNAAEHA AI+FA K+KLDI+
Sbjct: 296 GMTIVIALLSEYVVDTIEDASDSWGLSVSFISIILLPIVGNAAEHAGAIIFAFKNKLDIS 355
Query: 349 LGVAIGSSTQISMFVIPFCVVIGWIMGQQMDLNFQLFETATLFITVLVVAFMLQEGTSNY 408
LGVA+GS+TQIS+FV+P V++ WI+G +MDLNF + ET++L + +++ AF LQ+GTS+Y
Sbjct: 356 LGVALGSATQISLFVVPLSVIVAWILGIKMDLNFNILETSSLALAIIITAFTLQDGTSHY 415
Query: 409 FKGLMLILCYLIVAASFFVHVDPDSSN 435
KGL+L+LCY+I+AA FFV P ++
Sbjct: 416 MKGLVLLLCYVIIAACFFVDQIPQPND 442
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.327 0.139 0.406
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 7,067,947
Number of extensions: 241917
Number of successful extensions: 732
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 713
Number of HSP's successfully gapped: 6
Length of query: 437
Length of database: 11,106,569
Length adjustment: 102
Effective length of query: 335
Effective length of database: 8,310,137
Effective search space: 2783895895
Effective search space used: 2783895895
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 113 (48.1 bits)