BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0390600 Os03g0390600|AK063199
(136 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G40030.2 | chr4:18555840-18556827 REVERSE LENGTH=165 275 7e-75
AT5G10980.1 | chr5:3472591-3473349 REVERSE LENGTH=137 274 1e-74
AT4G40040.1 | chr4:18557539-18558236 REVERSE LENGTH=137 274 1e-74
AT5G65360.1 | chr5:26120099-26120509 REVERSE LENGTH=137 265 5e-72
AT5G10400.1 | chr5:3270478-3270888 REVERSE LENGTH=137 265 5e-72
AT5G10390.1 | chr5:3269065-3269475 REVERSE LENGTH=137 265 5e-72
AT3G27360.1 | chr3:10129459-10129869 REVERSE LENGTH=137 265 5e-72
AT1G09200.1 | chr1:2971722-2972132 REVERSE LENGTH=137 265 5e-72
AT1G75600.1 | chr1:28390753-28391461 FORWARD LENGTH=137 264 1e-71
AT1G13370.1 | chr1:4587926-4588522 REVERSE LENGTH=137 261 1e-70
AT5G65350.1 | chr5:26119406-26119825 REVERSE LENGTH=140 254 1e-68
AT1G19890.1 | chr1:6905034-6905792 FORWARD LENGTH=138 246 3e-66
AT5G12910.1 | chr5:4077162-4077557 FORWARD LENGTH=132 196 4e-51
AT1G01370.1 | chr1:143773-145400 FORWARD LENGTH=179 112 5e-26
>AT4G40030.2 | chr4:18555840-18556827 REVERSE LENGTH=165
Length = 164
Score = 275 bits (702), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 136/136 (100%), Positives = 136/136 (100%)
Query: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE
Sbjct: 29 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 88
Query: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 89 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 148
Query: 121 MPKDIQLARRIRGERA 136
MPKDIQLARRIRGERA
Sbjct: 149 MPKDIQLARRIRGERA 164
>AT5G10980.1 | chr5:3472591-3473349 REVERSE LENGTH=137
Length = 136
Score = 274 bits (700), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 136/136 (100%), Positives = 136/136 (100%)
Query: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
Query: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 121 MPKDIQLARRIRGERA 136
MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136
>AT4G40040.1 | chr4:18557539-18558236 REVERSE LENGTH=137
Length = 136
Score = 274 bits (700), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 136/136 (100%), Positives = 136/136 (100%)
Query: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
Query: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 121 MPKDIQLARRIRGERA 136
MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136
>AT5G65360.1 | chr5:26120099-26120509 REVERSE LENGTH=137
Length = 136
Score = 265 bits (678), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 132/136 (97%), Positives = 133/136 (97%)
Query: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
MARTKQTARKSTGGKAPRKQLATKAARKSAP TGGVKKPHR+RPGTVALREIRKYQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
Query: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
LLIRKLPFQRLVREIAQDFKTDLRFQS AV ALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 121 MPKDIQLARRIRGERA 136
MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136
>AT5G10400.1 | chr5:3270478-3270888 REVERSE LENGTH=137
Length = 136
Score = 265 bits (678), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 132/136 (97%), Positives = 133/136 (97%)
Query: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
MARTKQTARKSTGGKAPRKQLATKAARKSAP TGGVKKPHR+RPGTVALREIRKYQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
Query: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
LLIRKLPFQRLVREIAQDFKTDLRFQS AV ALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 121 MPKDIQLARRIRGERA 136
MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136
>AT5G10390.1 | chr5:3269065-3269475 REVERSE LENGTH=137
Length = 136
Score = 265 bits (678), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 132/136 (97%), Positives = 133/136 (97%)
Query: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
MARTKQTARKSTGGKAPRKQLATKAARKSAP TGGVKKPHR+RPGTVALREIRKYQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
Query: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
LLIRKLPFQRLVREIAQDFKTDLRFQS AV ALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 121 MPKDIQLARRIRGERA 136
MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136
>AT3G27360.1 | chr3:10129459-10129869 REVERSE LENGTH=137
Length = 136
Score = 265 bits (678), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 132/136 (97%), Positives = 133/136 (97%)
Query: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
MARTKQTARKSTGGKAPRKQLATKAARKSAP TGGVKKPHR+RPGTVALREIRKYQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
Query: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
LLIRKLPFQRLVREIAQDFKTDLRFQS AV ALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 121 MPKDIQLARRIRGERA 136
MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136
>AT1G09200.1 | chr1:2971722-2972132 REVERSE LENGTH=137
Length = 136
Score = 265 bits (678), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 132/136 (97%), Positives = 133/136 (97%)
Query: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
MARTKQTARKSTGGKAPRKQLATKAARKSAP TGGVKKPHR+RPGTVALREIRKYQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
Query: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
LLIRKLPFQRLVREIAQDFKTDLRFQS AV ALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 121 MPKDIQLARRIRGERA 136
MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136
>AT1G75600.1 | chr1:28390753-28391461 FORWARD LENGTH=137
Length = 136
Score = 264 bits (675), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 131/136 (96%), Positives = 133/136 (97%)
Query: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
MARTKQTARKS GGKAPR LATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE
Sbjct: 1 MARTKQTARKSHGGKAPRTLLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
Query: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
LLIRKLPFQRLVREIAQD+KTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61 LLIRKLPFQRLVREIAQDYKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 121 MPKDIQLARRIRGERA 136
MPKD+QLARRIRGERA
Sbjct: 121 MPKDVQLARRIRGERA 136
>AT1G13370.1 | chr1:4587926-4588522 REVERSE LENGTH=137
Length = 136
Score = 261 bits (666), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 129/136 (94%), Positives = 132/136 (97%)
Query: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
MARTKQ+ARKS GGKAP KQLATKAARKSAPTTGGVKKPHR+RPGTVALREIRKYQKSTE
Sbjct: 1 MARTKQSARKSHGGKAPTKQLATKAARKSAPTTGGVKKPHRFRPGTVALREIRKYQKSTE 60
Query: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
LL RKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61 LLNRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 121 MPKDIQLARRIRGERA 136
MPKD+QLARRIR ERA
Sbjct: 121 MPKDVQLARRIRAERA 136
>AT5G65350.1 | chr5:26119406-26119825 REVERSE LENGTH=140
Length = 139
Score = 254 bits (648), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 126/136 (92%), Positives = 131/136 (96%)
Query: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
MARTKQTAR STGGKAPRKQLA KAAR+SAP TGGVKKPHR+RPGTVALR+IRKYQKSTE
Sbjct: 1 MARTKQTARISTGGKAPRKQLAPKAARQSAPATGGVKKPHRFRPGTVALRDIRKYQKSTE 60
Query: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
+LIRKLPFQRLVREIAQDFKTDLRFQS AV ALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61 ILIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 121 MPKDIQLARRIRGERA 136
MPK+IQLARRIRGERA
Sbjct: 121 MPKEIQLARRIRGERA 136
>AT1G19890.1 | chr1:6905034-6905792 FORWARD LENGTH=138
Length = 137
Score = 246 bits (627), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 124/137 (90%), Positives = 129/137 (94%), Gaps = 1/137 (0%)
Query: 1 MARTKQTARKSTGGKAPRKQLATKAARKSA-PTTGGVKKPHRYRPGTVALREIRKYQKST 59
MARTKQTARKSTGGK PRK+LATKAARK+ P GGVK+ HR+RPGTVALREIRKYQKST
Sbjct: 1 MARTKQTARKSTGGKGPRKELATKAARKTRRPYRGGVKRAHRFRPGTVALREIRKYQKST 60
Query: 60 ELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVT 119
+LLIRKLPFQRLVREIAQDFK DLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVT
Sbjct: 61 DLLIRKLPFQRLVREIAQDFKVDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVT 120
Query: 120 IMPKDIQLARRIRGERA 136
IM KDIQLARRIRGERA
Sbjct: 121 IMSKDIQLARRIRGERA 137
>AT5G12910.1 | chr5:4077162-4077557 FORWARD LENGTH=132
Length = 131
Score = 196 bits (497), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 96/135 (71%), Positives = 115/135 (85%), Gaps = 5/135 (3%)
Query: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
MAR+ QTARK+TGGKAP A + + S P +KKP+RY+PGTVALREIRKYQK+T+
Sbjct: 1 MARSNQTARKATGGKAP--HFAMRVWQHSTPP---LKKPYRYKPGTVALREIRKYQKTTD 55
Query: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
L+IRKLPFQRLV+EIAQ K DLRFQ+ AV ALQEAAEA++VG+FEDTNLCA+HAKR TI
Sbjct: 56 LVIRKLPFQRLVKEIAQSLKADLRFQTGAVSALQEAAEAFMVGMFEDTNLCAMHAKRSTI 115
Query: 121 MPKDIQLARRIRGER 135
MPKDIQLA+R+RG+R
Sbjct: 116 MPKDIQLAKRLRGDR 130
>AT1G01370.1 | chr1:143773-145400 FORWARD LENGTH=179
Length = 178
Score = 112 bits (281), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 62/113 (54%), Positives = 78/113 (69%), Gaps = 3/113 (2%)
Query: 24 KAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDL 83
K +R++ P G KK +RYRPGTVAL+EIR +QK T LLI F R VR I
Sbjct: 63 KRSRQAMPR-GSQKKSYRYRPGTVALKEIRHFQKQTNLLIPAASFIREVRSITHMLAPPQ 121
Query: 84 --RFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGE 134
R+ + A++ALQEAAE YLVGLF D+ LCAIHA+RVT+M KD +LARR+ G+
Sbjct: 122 INRWTAEALVALQEAAEDYLVGLFSDSMLCAIHARRVTLMRKDFELARRLGGK 174
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.321 0.132 0.367
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 2,551,134
Number of extensions: 86485
Number of successful extensions: 251
Number of sequences better than 1.0e-05: 14
Number of HSP's gapped: 248
Number of HSP's successfully gapped: 14
Length of query: 136
Length of database: 11,106,569
Length adjustment: 88
Effective length of query: 48
Effective length of database: 8,693,961
Effective search space: 417310128
Effective search space used: 417310128
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 106 (45.4 bits)