BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0388800 Os03g0388800|Os03g0388800
(333 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G39955.1 | chr4:18530573-18532088 FORWARD LENGTH=329 273 7e-74
AT5G09430.1 | chr5:2932162-2933362 FORWARD LENGTH=312 260 6e-70
AT1G78210.1 | chr1:29422820-29424294 REVERSE LENGTH=315 234 5e-62
AT5G21950.1 | chr5:7254067-7255866 REVERSE LENGTH=309 184 4e-47
AT4G33180.1 | chr4:16000282-16002055 FORWARD LENGTH=308 171 5e-43
AT1G17430.1 | chr1:5982310-5983919 FORWARD LENGTH=333 153 1e-37
AT1G72620.1 | chr1:27341079-27342401 FORWARD LENGTH=336 145 3e-35
AT2G18360.1 | chr2:7976848-7979221 REVERSE LENGTH=314 139 2e-33
AT4G36610.1 | chr4:17265545-17267274 REVERSE LENGTH=318 132 2e-31
AT1G13820.1 | chr1:4735622-4737617 FORWARD LENGTH=340 67 9e-12
>AT4G39955.1 | chr4:18530573-18532088 FORWARD LENGTH=329
Length = 328
Score = 273 bits (699), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 137/270 (50%), Positives = 179/270 (66%), Gaps = 4/270 (1%)
Query: 55 SPAGAGTSVHVWX--XXXXXXXXVLLLHGFGASTTWQWASYLRPLLAAGFDPIVPDLLFF 112
S G GT H W +LLLHG GA+ WQW ++ + F+ VPDL+FF
Sbjct: 29 SDLGDGTVFHCWIPLTHIHTKPTLLLLHGIGANAMWQWDRFIDRFIPR-FNVYVPDLIFF 87
Query: 113 GDSCTLAADRSEVFQATAVKAAMDAIGVRRFDVVGVSYGGFVAYRMAAMYPEAVDRAVMV 172
GDS T DRSE FQAT V AMDA GVR V G+SYGGFVAY +AA + E VDR V++
Sbjct: 88 GDSYTTRPDRSESFQATCVMKAMDAYGVRTMTVAGLSYGGFVAYSLAAQFKERVDRVVLI 147
Query: 173 CAGVCLEETDLAAGLFPXXXXXXXXXXXXPSRPADVRRLVHLTFVRPPPIMPSCFLRDYI 232
CAGV LEE D G+F P P+ +RRL+ L+F +PP +PSCF DYI
Sbjct: 148 CAGVALEEKDSEDGMFKVKSPEEAAAVLFPQSPSMLRRLLQLSFYKPPIWIPSCFAMDYI 207
Query: 233 NVMGSDHNQEKTELLHTLINGRKLSDLPKISQPTLIIWGEQDQVFPMELAHRLERHLGE- 291
+VM D+ QE+ EL+ L GR+ ++LPKI+QPTL+IWGE+DQVFP+ELAHRL+R+LGE
Sbjct: 208 HVMCKDYLQERKELVEALHKGRRFANLPKITQPTLMIWGEEDQVFPVELAHRLKRYLGED 267
Query: 292 KSRLVVIKKAGHAVNLEKDKEVCKNIVEYL 321
+++LV++KK GHA+N EK KE+ K++ +L
Sbjct: 268 RAQLVLLKKTGHAINEEKPKEMYKHMKSFL 297
>AT5G09430.1 | chr5:2932162-2933362 FORWARD LENGTH=312
Length = 311
Score = 260 bits (665), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 129/280 (46%), Positives = 181/280 (64%), Gaps = 4/280 (1%)
Query: 45 GLRPFSIRLPSPAG-AGTSVHVW--XXXXXXXXXVLLLHGFGASTTWQWASYLRPLLAAG 101
GLR + L A T++H W +LLLHGFGA+ WQ+ +LR
Sbjct: 29 GLRSVTTDLSHGNSIASTAMHCWIPKSPNRSKPNLLLLHGFGANAMWQYGEHLRAF-TGR 87
Query: 102 FDPIVPDLLFFGDSCTLAADRSEVFQATAVKAAMDAIGVRRFDVVGVSYGGFVAYRMAAM 161
F+ VPDLLFFG S T +R+E FQA + M+A GV+R ++VG+SYGGFV Y +AA
Sbjct: 88 FNVYVPDLLFFGLSSTSEPNRTESFQARCLMRLMEAHGVQRMNIVGISYGGFVGYSLAAQ 147
Query: 162 YPEAVDRAVMVCAGVCLEETDLAAGLFPXXXXXXXXXXXXPSRPADVRRLVHLTFVRPPP 221
+PE V++ V+ CAGVCLEE D+ GLF P P ++ L+ +FV+P
Sbjct: 148 FPENVEKLVLCCAGVCLEEKDMEDGLFKVPNLEEATGILIPQTPEKLKELIRFSFVKPIK 207
Query: 222 IMPSCFLRDYINVMGSDHNQEKTELLHTLINGRKLSDLPKISQPTLIIWGEQDQVFPMEL 281
+PS FL D+I+VM ++ +EK +L+ +++ R+LSDLP+I Q +LIIWGE+DQ+FP+EL
Sbjct: 208 GVPSFFLWDFIDVMCTEFVEEKRDLIKSILKDRRLSDLPRIKQKSLIIWGEEDQIFPLEL 267
Query: 282 AHRLERHLGEKSRLVVIKKAGHAVNLEKDKEVCKNIVEYL 321
+RL+RH+GE + +VVIKKAGHAVNLEK KE K++ +L
Sbjct: 268 GYRLKRHIGESAEIVVIKKAGHAVNLEKSKEFVKHLKSFL 307
>AT1G78210.1 | chr1:29422820-29424294 REVERSE LENGTH=315
Length = 314
Score = 234 bits (597), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 118/286 (41%), Positives = 173/286 (60%), Gaps = 12/286 (4%)
Query: 45 GLRPFSIRLPSPAGAGTSVHVWXXXXXXXXX----VLLLHGFGASTTWQWASYLRPLLAA 100
GLRP +I L GT V+ W +LL+HG GA+ WQW R L +
Sbjct: 23 GLRPVTIDLKD----GTVVNFWVSKTKPESKPKPNLLLIHGLGATAIWQWYDVARRL-SR 77
Query: 101 GFDPIVPDLLFFGDSCTLAADRSEVFQATAVKAAMDAIGVRRFDVVGVSYGGFVAYRMAA 160
F+ +PDL+FFG S T +RS++FQA + A++A V++F +VG+SYGGFV YRMA+
Sbjct: 78 YFNLYIPDLVFFGGSSTTRPERSDIFQAQTLMRALEAQSVKKFSLVGLSYGGFVGYRMAS 137
Query: 161 MYPEAVDRAVMVCAGVCLEETDLAAGLFPXXXXXXXXXXXXPSRPADVRRLVHLTFVRP- 219
MY +AV++ V+ CA VC+EE D+ AG+F P +R L+ F +P
Sbjct: 138 MYADAVEKVVICCAAVCVEEKDMKAGVFKVSDLDEASKILVPESVKKLRELMGYIFYKPA 197
Query: 220 -PPIMPSCFLRDYI-NVMGSDHNQEKTELLHTLINGRKLSDLPKISQPTLIIWGEQDQVF 277
++P+C L D+I + + D+ +EK EL+ + R +S++PK+ QPTLIIWGE DQVF
Sbjct: 198 LARLVPTCLLHDFIEHALTRDNMEEKRELIKAIPKDRIISEIPKLKQPTLIIWGEHDQVF 257
Query: 278 PMELAHRLERHLGEKSRLVVIKKAGHAVNLEKDKEVCKNIVEYLRE 323
P+E+ RLE+H+G+ +LV+IK+ GH N EK K+ K + +L E
Sbjct: 258 PLEMGKRLEKHVGDNGKLVIIKRTGHIFNFEKPKKFIKLLKSFLLE 303
>AT5G21950.1 | chr5:7254067-7255866 REVERSE LENGTH=309
Length = 308
Score = 184 bits (468), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 100/250 (40%), Positives = 141/250 (56%), Gaps = 3/250 (1%)
Query: 76 VLLLHGFGASTTWQWASYLRPLLAAGFDPIVPDLLFFGDSCTLAADRSEVFQATAVKAAM 135
+LLLHGFG S WQW+ ++PL + F VPDL+FFG S + +RSE+FQA + M
Sbjct: 57 LLLLHGFGPSAVWQWSHQVKPL-SHFFRLYVPDLVFFGGSSSSGENRSEMFQALCMGKLM 115
Query: 136 DAIGVRRFDVVGVSYGGFVAYRMAAMYPEAVDRAVMVCAGVCLEETDLAAGLFPXXXXXX 195
+ + V RF VVG SYGGFVAY MA M+PE V++ V+ +GV L +D A
Sbjct: 116 EKLEVERFSVVGTSYGGFVAYNMAKMFPEKVEKVVLASSGVNLRRSDNEA-FIARAKCHR 174
Query: 196 XXXXXXPSRPADVRRLVHLTFVRPPPIMPSCFLRDYINVMGSDHNQEKTELLHTLINGR- 254
P+ D+RR + + +P L D+ M S+ +EK ELL L G+
Sbjct: 175 IKEVMLPASATDLRRFSGMVSSKRLDYVPDFVLNDFCQKMYSEKREEKAELLEGLSIGKD 234
Query: 255 KLSDLPKISQPTLIIWGEQDQVFPMELAHRLERHLGEKSRLVVIKKAGHAVNLEKDKEVC 314
+++ I Q ++IWGEQDQVFP+++AH L+ LG K+ L VI+K H EK KE
Sbjct: 235 DKTNVSPIQQDVMLIWGEQDQVFPLKMAHDLKEMLGTKATLKVIQKTSHIPQTEKSKEFN 294
Query: 315 KNIVEYLREP 324
++ +L P
Sbjct: 295 GFVMSFLLPP 304
>AT4G33180.1 | chr4:16000282-16002055 FORWARD LENGTH=308
Length = 307
Score = 171 bits (433), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 87/249 (34%), Positives = 141/249 (56%), Gaps = 3/249 (1%)
Query: 76 VLLLHGFGASTTWQWASYLRPLLAAGFDPIVPDLLFFGDSCTLAADRSEVFQATAVKAAM 135
+LLLHGFG S+ WQW ++ + F PDL+FFGDS + + +R+EVFQA + M
Sbjct: 58 MLLLHGFGPSSMWQWRRQMQAFSPSAFRVYSPDLVFFGDSTSSSTNRTEVFQAECMAKLM 117
Query: 136 DAIGVRRFDVVGVSYGGFVAYRMAAMYPEAVDRAVMVCAGVCLEETDLAAGLFPXXXXXX 195
IG+ +++V G SYGGFVAY MA M+PE V++ V+ +G+ + + D L
Sbjct: 118 AKIGIGKYNVAGTSYGGFVAYHMAKMWPEKVEKVVIASSGINMRKCD-GESLLQRSNCEC 176
Query: 196 XXXXXXPSRPADVRRLVHL-TFVRPPPIMPSCFLRDYINVMGSDHNQEKTELLHTLINGR 254
PS + R L+ L + R + P D IN + + +EK ELL + GR
Sbjct: 177 IEKVMLPSTATEFRTLMALASSWRLVRMFPDALWNDVINNLYKKNRKEKIELLKGVTFGR 236
Query: 255 KLS-DLPKISQPTLIIWGEQDQVFPMELAHRLERHLGEKSRLVVIKKAGHAVNLEKDKEV 313
+ ++ +SQ LI+WG++DQ+FP+++A+ L+ LG+K++L +I H +E +E
Sbjct: 237 SENLNIDSLSQEVLIVWGDKDQIFPVKMAYELKEILGDKTKLEIIDNTSHVPQIECAQEF 296
Query: 314 CKNIVEYLR 322
++ +L+
Sbjct: 297 NNIVLRFLK 305
>AT1G17430.1 | chr1:5982310-5983919 FORWARD LENGTH=333
Length = 332
Score = 153 bits (387), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 100/275 (36%), Positives = 148/275 (53%), Gaps = 22/275 (8%)
Query: 46 LRPFSIRLPSPAGAGTSVHVWXX--XXXXXXXVLLLHGFGASTTWQWASYLRPLLAAGFD 103
LRP ++ L T+VH W +++LHG+G ++ WQ+ + L + F+
Sbjct: 52 LRPVTVDLDD---GETTVHFWISGHRRISRQNLVMLHGYGGNSKWQFVHQVSDL-SKSFN 107
Query: 104 PIVPDLLFFGDSCTLAADRSEVFQATAVKAAMDAIGVRR----FDVVGVSYGGFVAYRMA 159
+PDL+FFG S + DRS QA +V + +G + +SYGGFVAY+MA
Sbjct: 108 LFIPDLVFFGKSYSKNRDRSVEIQARSVVGGLKKLGCVEGGGGISIYSISYGGFVAYKMA 167
Query: 160 AMYPEAVDRAVMVCAGVCLEETDLAAGLFPXXXXXXXXXXXXPSRPADVRRLVH------ 213
++P V++ V+V +GV + A L P P D+R L+
Sbjct: 168 EIWPAMVEKLVIVSSGVGFTQQQKTAEL--KKHGGDCSKILVPKTPMDLRLLIKISMNTG 225
Query: 214 LTFVRPPPIMPSCFLRDYINVMGSDHNQEKTELLHTLINGRKLSDLPKISQPTLIIWGEQ 273
LTFV +P FL +I VM + QE EL L+ + +LP ISQ TLI+WG++
Sbjct: 226 LTFV---DWVPDFFLSQFIAVMYEKNRQELLELAKNLLEREEEPELPVISQKTLIVWGDK 282
Query: 274 DQVFPMELAHRLERHLGEKSRLVVIKKAGHAVNLE 308
D+VFP+E A+RL+RHL + SRL +IK+ GHAVN+E
Sbjct: 283 DKVFPLEHAYRLQRHL-QSSRLEIIKETGHAVNIE 316
>AT1G72620.1 | chr1:27341079-27342401 FORWARD LENGTH=336
Length = 335
Score = 145 bits (366), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 93/283 (32%), Positives = 148/283 (52%), Gaps = 14/283 (4%)
Query: 46 LRPFSIRLPSPAGAGTSVHVWXXXXXXXX--XVLLLHGFGASTTWQWASYLRPLLAAGFD 103
LRP ++ L T++H W +++LHG+G ++ WQ+ + L + F+
Sbjct: 56 LRPITVDLND---GETTLHFWISGHRKINRPNLVMLHGYGGNSKWQFIHQVSDL-SKSFN 111
Query: 104 PIVPDLLFFGDSCTLAADRSEVFQATAVKAAMDAIGVRRFD--VVGVSYGGFVAYRMAAM 161
+PDL+FFG S + DR+ FQA ++ + +G D V +SYGGFVAYR+A +
Sbjct: 112 LFIPDLVFFGKSYSRNTDRTIEFQARSIVGGLKRLGCGDGDLSVYSISYGGFVAYRIAKI 171
Query: 162 YPEAVDRAVMVCAGVCLEETDLAAGLFPXXXXXXXXXXXXPSRPADVRRLVHL---TFVR 218
+PE +++ V+V +GV + + PS P D+R LV + T +R
Sbjct: 172 WPEMIEKLVIVSSGVGFTQQQKMTEM--KKHGGDVSEILVPSNPRDLRLLVKVSMNTGIR 229
Query: 219 PPPIMPSCFLRDYINVMGSDHNQEKTELLHTLINGRKLSDLPKISQPTLIIWGEQDQVFP 278
+P L +I VM + QE +L L+ + +L ISQ TLI+WG++D VFP
Sbjct: 230 FLDWVPDFILSQFIAVMYETNRQELVDLAKNLLEREEEPELFSISQRTLIVWGDKDNVFP 289
Query: 279 MELAHRLERHLGEKSRLVVIKKAGHAVNLEKDKEVCKNIVEYL 321
+E RL+RHL S L V+K+ GH VN+E + I+ ++
Sbjct: 290 LEHGRRLQRHL-PNSSLEVLKEIGHGVNIEAPTTLNNLIISFV 331
>AT2G18360.1 | chr2:7976848-7979221 REVERSE LENGTH=314
Length = 313
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 83/237 (35%), Positives = 124/237 (52%), Gaps = 10/237 (4%)
Query: 76 VLLLHGFGAS--TTWQWASYLRPLLAAGFDPIVPDLLFFGDSCTLAADRSEVFQATAVKA 133
+L +HGF A TWQ+ LA + +PDLLFFG S + ADRS FQA +
Sbjct: 65 LLFIHGFAAEGIVTWQFQV---GSLAKKYSVYIPDLLFFGGSYSDNADRSPAFQAHCLVK 121
Query: 134 AMDAIGVRRFDVVGVSYGGFVAYRMAAMYPEAVDRAVMVCAGVCLEETD-LAAGLFPXXX 192
++ +G+ +F +VG SYGG VA+++A YPE V MV +G L TD ++
Sbjct: 122 SLRILGIEKFTLVGFSYGGMVAFKIAEEYPEMVQ--AMVVSGSILAMTDTISESNLNQLG 179
Query: 193 XXXXXXXXXPSRPADVRRLVHLTFVRPPPIMPSCFLRDYINVMGSDHNQEKTELLHTLIN 252
P+ ++ L L V P P +D+I VM ++ +E+ ELL L+
Sbjct: 180 FKSSADLLLPTSVKGLKTLFTLA-VHKPMWFPKRLFKDFIEVMITNR-KERAELLEALVI 237
Query: 253 GRKLSDLPKISQPTLIIWGEQDQVFPMELAHRLERHLGEKSRLVVIKKAGHAVNLEK 309
K +P+ Q ++WGE DQ+F +E A ++ LGE + + IKKAGH +LE+
Sbjct: 238 SNKDVTIPRFQQKIHLLWGESDQIFNLEFAKSMKEQLGENATMESIKKAGHLAHLER 294
>AT4G36610.1 | chr4:17265545-17267274 REVERSE LENGTH=318
Length = 317
Score = 132 bits (332), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 79/236 (33%), Positives = 120/236 (50%), Gaps = 8/236 (3%)
Query: 76 VLLLHGFGAS--TTWQWASYLRPLLAAGFDPIVPDLLFFGDSCTLAADRSEVFQATAVKA 133
VLL+HGF TWQ+ L+ + +PDLLFFG S T +DRS FQA +
Sbjct: 63 VLLIHGFAGEGIVTWQFQV---GALSKKYSVYIPDLLFFGGSYTDNSDRSPAFQADCLVK 119
Query: 134 AMDAIGVRRFDVVGVSYGGFVAYRMAAMYPEAVDRAVMVCAGVCLEETDLAAGLFPXXXX 193
+ +GV +F VG SYGG VA+++A YP+ V RA++V + +
Sbjct: 120 GLRILGVDKFVPVGFSYGGMVAFKIAEAYPDMV-RAIVVSGSIPTMTDTINEASLNRLGF 178
Query: 194 XXXXXXXXPSRPADVRRLVHLTFVRPPPIMPSCFLRDYINVMGSDHNQEKTELLHTLING 253
P+ ++ L + V P P +DYI VM ++ +E+ ELL ++
Sbjct: 179 SSSTDLLLPTSVTGLKALFTIA-VHKPLWFPKRLFKDYIEVM-FNNRKERAELLEAVVVS 236
Query: 254 RKLSDLPKISQPTLIIWGEQDQVFPMELAHRLERHLGEKSRLVVIKKAGHAVNLEK 309
K + +P + +WGE DQ+F +ELA ++ +GE + + IKKAGH V LE+
Sbjct: 237 NKEAQIPHFPRKIHFLWGESDQIFDLELARDMKEQIGENATIESIKKAGHLVQLER 292
>AT1G13820.1 | chr1:4735622-4737617 FORWARD LENGTH=340
Length = 339
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 85/279 (30%), Positives = 119/279 (42%), Gaps = 66/279 (23%)
Query: 76 VLLLHGFGASTTWQWASYLRPLLA-AGFDPIVPDLLFFGDS-------CTLAADRSEV-- 125
V+LLHGF +S +W Y PLL AG + D+L +G S C +A+ R
Sbjct: 85 VVLLHGFDSSCL-EW-RYTYPLLEEAGLETWAFDILGWGFSDLDKLPPCDVASKREHFYK 142
Query: 126 FQATAVKAAMDAIGVRRFDVVGVSYGGFVAYRMAAMYPEAVDRAVMVCAGVCLEETDLAA 185
F + +K R +VG S G VA +A +PEAV+ V++ A V E T A
Sbjct: 143 FWKSHIK--------RPVVLVGPSLGAAVAIDIAVNHPEAVESLVLMDASVYAEGTGNLA 194
Query: 186 GLFPXXXXXXXXXXXXPSRPADVRRLVHLTFVRPPPIMPSCFLRDYINV-------MGSD 238
L P A V+L + S LR Y+N + +
Sbjct: 195 TL--------------PKAAAYAG--VYL--------LKSIPLRLYVNFICFNGISLETS 230
Query: 239 HNQEKTELLHTLI-------------NGRKLSDL-PKISQPTLIIWGEQDQVFPMELAHR 284
+ K LH L G ++ L K+SQ TLI+WGE DQ+ +LA R
Sbjct: 231 WDWTKIGRLHCLYPWWEDATVSFMTSGGYNVTSLIKKVSQKTLILWGEDDQIISNKLAWR 290
Query: 285 LERHLGEKSRLVVIKKAGHAVNLEKDKEVCKNIVEYLRE 323
L L +R+ I GH ++EK V K I E++RE
Sbjct: 291 LHGELS-NARVKQISNCGHLPHVEKPAAVTKLIAEFVRE 328
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.323 0.139 0.427
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 5,880,461
Number of extensions: 223324
Number of successful extensions: 590
Number of sequences better than 1.0e-05: 11
Number of HSP's gapped: 578
Number of HSP's successfully gapped: 11
Length of query: 333
Length of database: 11,106,569
Length adjustment: 99
Effective length of query: 234
Effective length of database: 8,392,385
Effective search space: 1963818090
Effective search space used: 1963818090
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 112 (47.8 bits)