BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0370400 Os03g0370400|AK060059
(193 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G21550.1 | chr3:7591708-7592262 REVERSE LENGTH=185 169 1e-42
AT3G21520.1 | chr3:7582000-7582623 FORWARD LENGTH=208 149 1e-36
AT4G24310.1 | chr4:12600900-12601541 FORWARD LENGTH=214 123 7e-29
AT3G02430.1 | chr3:499360-500019 FORWARD LENGTH=220 120 3e-28
AT5G46090.1 | chr5:18693485-18694129 FORWARD LENGTH=215 110 5e-25
AT1G09157.1 | chr1:2951665-2952396 REVERSE LENGTH=244 106 9e-24
AT4G18425.1 | chr4:10181421-10182062 REVERSE LENGTH=214 104 3e-23
AT5G39650.1 | chr5:15875265-15875999 FORWARD LENGTH=245 101 2e-22
AT5G27370.1 | chr5:9667311-9667886 FORWARD LENGTH=192 97 4e-21
AT4G28485.1 | chr4:14075321-14076011 REVERSE LENGTH=166 60 5e-10
>AT3G21550.1 | chr3:7591708-7592262 REVERSE LENGTH=185
Length = 184
Score = 169 bits (427), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 87/179 (48%), Positives = 113/179 (63%), Gaps = 7/179 (3%)
Query: 10 SVADRALRGVADLIKLLPSGTVFLFQFLSPLVTNNGHCAAAYSRVXXXXXXXXXXXXXXX 69
++ DR GV DLIKLLP+GTVFLFQFL+P++TNNGHC ++
Sbjct: 7 AIRDRTYSGVGDLIKLLPTGTVFLFQFLNPVLTNNGHCLLI-NKYLTGVLIVICAFSCCF 65
Query: 70 XSFTDSYVGSDGRVYYGVVTARGLRTFAADPDAAARDLSGYRLRAGDFVHAALSLLVFAT 129
FTDSY DG V+YGV T +GL PD+++ DLS RLR GDFVHA SL+VF+
Sbjct: 66 TCFTDSYRTRDGYVHYGVATVKGLW-----PDSSSVDLSSKRLRVGDFVHAFFSLIVFSV 120
Query: 130 IALLDADTVACLYPALEVSERTMMAVLPPVVGGVASYAFMVFPNNRHGIGYQPTRATED 188
I+LLDA+TV C YP + + + VLPPV+G ++ F VFP+ RHGIG P+ +ED
Sbjct: 121 ISLLDANTVNCFYPGFGSAGKIFLMVLPPVIGVISGAVFTVFPSRRHGIG-NPSDHSED 178
>AT3G21520.1 | chr3:7582000-7582623 FORWARD LENGTH=208
Length = 207
Score = 149 bits (375), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 74/180 (41%), Positives = 111/180 (61%), Gaps = 6/180 (3%)
Query: 5 PARSVSVAD--RALRGVADLIKLLPSGTVFLFQFLSPLVTNNGHCAAAYSRVXXXXXXXX 62
PA S ++A+ ++L G+ LIKLLP+GT+F++ L+P++TN+G C+ ++V
Sbjct: 14 PASSENMANTNKSLTGLESLIKLLPTGTLFIYLLLNPVLTNDGECSTG-NKVMSSILVAL 72
Query: 63 XXXXXXXXSFTDSYVGSDGRVYYGVVTARGLRTFAADPDAAARDLSGYRLRAGDFVHAAL 122
FTDS+ G DG +G+VT +GL T+A + + DLS Y+LR DFVHA
Sbjct: 73 CSFSCVFSCFTDSFKGVDGSRKFGIVTKKGLWTYA---EPGSVDLSKYKLRIADFVHAGF 129
Query: 123 SLLVFATIALLDADTVACLYPALEVSERTMMAVLPPVVGGVASYAFMVFPNNRHGIGYQP 182
L VF T+ LLDA+T +C YP +++T++ LPP VG ++ F +FP+ R GIGY P
Sbjct: 130 VLAVFGTLVLLDANTASCFYPRFRETQKTLVMALPPAVGVASATIFALFPSKRSGIGYAP 189
>AT4G24310.1 | chr4:12600900-12601541 FORWARD LENGTH=214
Length = 213
Score = 123 bits (308), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 69/173 (39%), Positives = 95/173 (54%), Gaps = 3/173 (1%)
Query: 10 SVADRALRGVADLIKLLPSGTVFLFQFLSPLVTNNGHCAAAYSRVXXXXXXXXXXXXXXX 69
+V + L A+L LLP+GT+ F L P+ T+NG C ++V
Sbjct: 33 AVMSQTLTSAANLANLLPTGTLLAFTLLIPVFTSNGSCDYP-TQVLTIVLLTLLSISCFL 91
Query: 70 XSFTDSYVGSDGRVYYGVVTARGLRTFA-ADPDAAAR-DLSGYRLRAGDFVHAALSLLVF 127
SFTDS DG VYYG T +G+ F DPD +LS YR+R D++HA LS+LVF
Sbjct: 92 SSFTDSVKAEDGNVYYGFATRKGMWVFDYPDPDGLGLPNLSKYRIRIIDWIHAVLSVLVF 151
Query: 128 ATIALLDADTVACLYPALEVSERTMMAVLPPVVGGVASYAFMVFPNNRHGIGY 180
+AL D + V+C YPA E + ++ ++P VG + F+VFP RHGIGY
Sbjct: 152 GAVALRDKNAVSCFYPAPEQETKKVLDIVPMGVGVICGMLFLVFPARRHGIGY 204
>AT3G02430.1 | chr3:499360-500019 FORWARD LENGTH=220
Length = 219
Score = 120 bits (302), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 104/189 (55%), Gaps = 11/189 (5%)
Query: 7 RSVSVADRA----LRGVADLIKLLPSGTVFLFQFLSPLVTNNGHCAAAYSRVXXXXXXXX 62
R +S++ RA L A+L LLP+GT+ FQ L+P+ T+NG C A +R
Sbjct: 32 RQMSMSQRAMSNTLTSAANLSNLLPTGTLLAFQLLTPVFTSNGVCDHA-TRFLTAVLLFL 90
Query: 63 XXXXXXXXSFTDSYVGSDGRVYYGVVTARGLRTFAAD-PDAAAR---DLSGYRLRAGDFV 118
SFTDS DG +Y+G VT +G+ + D PD + DL+ YR+R D++
Sbjct: 91 LAASCFVSSFTDSVKADDGTIYFGFVTFKGM--WVVDYPDPSGLGLPDLAKYRMRFVDWI 148
Query: 119 HAALSLLVFATIALLDADTVACLYPALEVSERTMMAVLPPVVGGVASYAFMVFPNNRHGI 178
HA LS+LVF +AL D C YP+ E + ++ ++P VG + S FMVFP RHGI
Sbjct: 149 HATLSVLVFGAVALRDKYITDCFYPSPEAETKHVLDIVPVGVGVMCSLLFMVFPARRHGI 208
Query: 179 GYQPTRATE 187
GY T + +
Sbjct: 209 GYLVTGSVD 217
>AT5G46090.1 | chr5:18693485-18694129 FORWARD LENGTH=215
Length = 214
Score = 110 bits (275), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 62/167 (37%), Positives = 75/167 (44%), Gaps = 1/167 (0%)
Query: 14 RALRGVADLIKLLPSGTVFLFQFLSPLVTNNGHCAAAYSRVXXXXXXXXXXXXXXXXSFT 73
+ + A+L LLP+GTV FQ LSP+ TN G C SR SFT
Sbjct: 44 KTFQTTANLANLLPTGTVLAFQILSPICTNVGRCDLT-SRFMTALLVSICGFSCFILSFT 102
Query: 74 DSYVGSDGRVYYGVVTARGLRTFAADPDAAARDLSGYRLRAGDFVHAALSLLVFATIALL 133
DSY +G V YG T G Y+LR DFVHA +S LVF + L
Sbjct: 103 DSYKDLNGSVCYGFATIHGFWIIDGSATLPQELSKSYKLRFIDFVHAIMSFLVFGAVVLF 162
Query: 134 DADTVACLYPALEVSERTMMAVLPPVVGGVASYAFMVFPNNRHGIGY 180
D + V C YP ++ LP VG S F FP RHGIG+
Sbjct: 163 DQNVVNCFYPEPSAEVVELLTTLPVAVGVFCSMVFAKFPTTRHGIGF 209
>AT1G09157.1 | chr1:2951665-2952396 REVERSE LENGTH=244
Length = 243
Score = 106 bits (264), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 89/184 (48%), Gaps = 13/184 (7%)
Query: 12 ADRALRGVADLIKLLPSGTVFLFQFLSPLVTNNGHCAAAYSRVXXXXXXXXXXXXXXXXS 71
+ + + L+ LP+GT+ +F+ + P + +G C + +
Sbjct: 61 VQKTVSKTSMLVNFLPTGTLLMFEMVLPTIYRDGDCNGI-NTLMIHLLLLLCAMSCFFFH 119
Query: 72 FTDSYVGSDGRVYYGVVTARGLRTFAADPDA--------AARDL----SGYRLRAGDFVH 119
FTDS+ SDG++YYG VT RGL F P A +++ Y+LR DFVH
Sbjct: 120 FTDSFKASDGKIYYGFVTPRGLAVFMKPPSPGFGGGDVIAEKEIPVTDERYKLRVNDFVH 179
Query: 120 AALSLLVFATIALLDADTVACLYPALEVSERTMMAVLPPVVGGVASYAFMVFPNNRHGIG 179
+ +S+LVF IA D CL+P E +M P +VG V S F+VFP +R+G+G
Sbjct: 180 SVMSVLVFMAIAFSDRRVTGCLFPGKEKEMDQVMESFPLMVGIVCSALFLVFPTSRYGVG 239
Query: 180 YQPT 183
T
Sbjct: 240 CMST 243
>AT4G18425.1 | chr4:10181421-10182062 REVERSE LENGTH=214
Length = 213
Score = 104 bits (259), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 78/167 (46%), Gaps = 1/167 (0%)
Query: 14 RALRGVADLIKLLPSGTVFLFQFLSPLVTNNGHCAAAYSRVXXXXXXXXXXXXXXXXSFT 73
+ + A L LLP+GTV FQ LSP+ +N G C S++ SFT
Sbjct: 43 QTFQTTAHLANLLPTGTVLAFQLLSPIFSNGGQCDLV-SKIMTSTLVAICGFSCFILSFT 101
Query: 74 DSYVGSDGRVYYGVVTARGLRTFAADPDAAARDLSGYRLRAGDFVHAALSLLVFATIALL 133
DSY +G + YG+ T G Y+LR DFVHA +SL VF + L
Sbjct: 102 DSYKDKNGTICYGLATIHGFWIIDGSTTLPQELSKRYKLRFIDFVHAFMSLFVFGAVVLF 161
Query: 134 DADTVACLYPALEVSERTMMAVLPPVVGGVASYAFMVFPNNRHGIGY 180
D + V C +P+ ++ LP VG +S F FP R+GIG+
Sbjct: 162 DRNAVNCFFPSPSAEALEVLTALPVGVGVFSSMLFATFPTTRNGIGF 208
>AT5G39650.1 | chr5:15875265-15875999 FORWARD LENGTH=245
Length = 244
Score = 101 bits (252), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 85/180 (47%), Gaps = 13/180 (7%)
Query: 12 ADRALRGVADLIKLLPSGTVFLFQFLSPLVTNNGHCAAAYSRVXXXXXXXXXXXXXXXXS 71
+ + + L+ LP+GT+ +F+ + P + +G C + +
Sbjct: 62 VQKTVSKTSMLVNFLPTGTLLMFEMVLPSIYRDGDCNGI-NTLMIHLLLLLCAMSCFFFH 120
Query: 72 FTDSYVGSDGRVYYGVVTARGLRTFAADP--DAAARDLSG----------YRLRAGDFVH 119
FTDS+ SDG++YYG VT RGL F P + D+ Y+L DFVH
Sbjct: 121 FTDSFKASDGKIYYGFVTPRGLAVFMKPPPPEFGGGDVIAEAEIPVTDDRYKLTVNDFVH 180
Query: 120 AALSLLVFATIALLDADTVACLYPALEVSERTMMAVLPPVVGGVASYAFMVFPNNRHGIG 179
A +S+LVF IA D CL+P E +M P +VG V S F+VFP R+G+G
Sbjct: 181 AVMSVLVFMAIAFSDRRVTGCLFPGKEKEMDQVMESFPIMVGIVCSALFLVFPTTRYGVG 240
>AT5G27370.1 | chr5:9667311-9667886 FORWARD LENGTH=192
Length = 191
Score = 97.4 bits (241), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/187 (33%), Positives = 89/187 (47%), Gaps = 18/187 (9%)
Query: 14 RALRGVADLIKLLPSGTVFLFQFLSPLVTNNGHCAAA-YSRVXXXXXXXXXXXXXXXXSF 72
R+L + LLP+GT +F+ L P +N G C +++ SF
Sbjct: 7 RSLPSAGNFANLLPTGTALIFETLLPSFSNGGECNNKPVNKLLTITLISFCAAACFFSSF 66
Query: 73 TDSYVGSDGRVYYGVVTARGLRTFAADPDAAARDLSG--------YRLRAGDFVHAALSL 124
TDSYVG DGR+YYG+ T+ GL PD SG Y+L DFVHA +S+
Sbjct: 67 TDSYVGQDGRIYYGIATSNGLHILNDYPDEGYDPESGLTADKRERYKLSFVDFVHAFVSV 126
Query: 125 LVFATIALLDADTVACLYPALEVSERT-------MMAVLPPVVGGVASYAFMVFPNNRHG 177
+VF +A+ +D CL P E E + M+ +V +AS+ F +FP+ R G
Sbjct: 127 IVFLALAVESSDFRRCLLP--EDDENSWGGHFVLMIKYFAVMVLTMASFFFAIFPSKRRG 184
Query: 178 IGYQPTR 184
IG R
Sbjct: 185 IGISDIR 191
>AT4G28485.1 | chr4:14075321-14076011 REVERSE LENGTH=166
Length = 165
Score = 60.5 bits (145), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 51/100 (51%)
Query: 85 YGVVTARGLRTFAADPDAAARDLSGYRLRAGDFVHAALSLLVFATIALLDADTVACLYPA 144
YG+ T GL + Y+L+ DF+HA +S+LVF +++ D + CL+P
Sbjct: 65 YGLATWSGLLVMDGSITLTEEEKEKYKLKILDFIHAIMSMLVFFAVSMFDQNVTRCLFPV 124
Query: 145 LEVSERTMMAVLPPVVGGVASYAFMVFPNNRHGIGYQPTR 184
+ ++ LP V+G + F+ FP RHGIG T+
Sbjct: 125 PSEETKEILTSLPFVIGVICGAFFLAFPTRRHGIGSPLTK 164
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.324 0.137 0.405
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 3,571,200
Number of extensions: 116465
Number of successful extensions: 334
Number of sequences better than 1.0e-05: 10
Number of HSP's gapped: 315
Number of HSP's successfully gapped: 10
Length of query: 193
Length of database: 11,106,569
Length adjustment: 93
Effective length of query: 100
Effective length of database: 8,556,881
Effective search space: 855688100
Effective search space used: 855688100
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 109 (46.6 bits)