BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0370200 Os03g0370200|J033044F03
(180 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G61190.1 | chr5:24615480-24619886 FORWARD LENGTH=996 147 4e-36
AT3G62200.1 | chr3:23023437-23025671 REVERSE LENGTH=674 140 3e-34
AT5G61180.1 | chr5:24612867-24614174 FORWARD LENGTH=347 137 2e-33
AT3G62210.1 | chr3:23026910-23028113 REVERSE LENGTH=280 134 3e-32
AT5G09840.1 | chr5:3059027-3061970 FORWARD LENGTH=925 99 1e-21
AT5G64710.1 | chr5:25869368-25872092 FORWARD LENGTH=842 97 4e-21
AT3G60940.1 | chr3:22521615-22523029 REVERSE LENGTH=258 77 4e-15
AT2G15560.1 | chr2:6788319-6789788 REVERSE LENGTH=490 74 3e-14
AT3G61028.2 | chr3:22581506-22584209 REVERSE LENGTH=255 59 1e-09
AT3G62050.1 | chr3:22978305-22978944 FORWARD LENGTH=158 59 2e-09
AT5G35640.1 | chr5:13834633-13835606 FORWARD LENGTH=193 55 2e-08
>AT5G61190.1 | chr5:24615480-24619886 FORWARD LENGTH=996
Length = 995
Score = 147 bits (370), Expect = 4e-36, Method: Composition-based stats.
Identities = 75/148 (50%), Positives = 88/148 (59%), Gaps = 1/148 (0%)
Query: 1 MGDRAAAAAEAKTSVWWDIDRCGVPPCCRDPHRXXXXXXXXXXXXXXXXXXSIFAYGDXX 60
M A +AKTSVWWDI+ C VP D H SI AYGD
Sbjct: 1 MSTAEADYVKAKTSVWWDIENCEVPRGW-DAHVIALNVSSSLLKMNYCGPVSISAYGDTN 59
Query: 61 XXXXXXXXXXSSTGISLNHVPAGAKDGTDKKMLVDMLFWAFDNPPPGNYLLISGDQDFSD 120
SSTG++LNH+PAG KD +DKK+LVDML WA DNP P N LLISGD+DFS+
Sbjct: 60 LIPLHHQQALSSTGVALNHIPAGVKDASDKKILVDMLLWAIDNPAPANLLLISGDRDFSN 119
Query: 121 LLHRLRMKRYGILLAQPSNVSSRVLAAA 148
LH+LRM+RY ILLAQP S ++AAA
Sbjct: 120 ALHQLRMRRYNILLAQPPRASVPLVAAA 147
>AT3G62200.1 | chr3:23023437-23025671 REVERSE LENGTH=674
Length = 673
Score = 140 bits (354), Expect = 3e-34, Method: Composition-based stats.
Identities = 73/143 (51%), Positives = 86/143 (60%), Gaps = 1/143 (0%)
Query: 6 AAAAEAKTSVWWDIDRCGVPPCCRDPHRXXXXXXXXXXXXXXXXXXSIFAYGDXXXXXXX 65
A AKTSVWWDI+ C VP D H SI AYGD
Sbjct: 23 AQYVRAKTSVWWDIENCQVPNGL-DAHGIAQNITSALQKMNYCGPVSISAYGDTNRIPLT 81
Query: 66 XXXXXSSTGISLNHVPAGAKDGTDKKMLVDMLFWAFDNPPPGNYLLISGDQDFSDLLHRL 125
+STGI+LNHVPAG KD +DKK+LVDMLFWA DNP P N++LISGD+DFS+ LH L
Sbjct: 82 IQHALNSTGIALNHVPAGVKDASDKKILVDMLFWALDNPAPANFMLISGDRDFSNALHGL 141
Query: 126 RMKRYGILLAQPSNVSSRVLAAA 148
RM+RY +LLAQP S ++ AA
Sbjct: 142 RMRRYNVLLAQPLKASVPLVHAA 164
>AT5G61180.1 | chr5:24612867-24614174 FORWARD LENGTH=347
Length = 346
Score = 137 bits (346), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 77/166 (46%), Positives = 93/166 (56%), Gaps = 21/166 (12%)
Query: 3 DRAAAA--AEAKTSVWWDIDRCGVPPCCRDPHRXXXXXXXXXXXXXXXXXXSIFAYGDXX 60
D +A A A AKTSVWWDI+ C VP C DPH +I+AYGD
Sbjct: 70 DESAKADFAGAKTSVWWDIENCEVPKGC-DPHGVAQSIRSVLSKSNFCGPLTIYAYGDTN 128
Query: 61 XXXXXXXXXXSSTGISLNHVPA------------------GAKDGTDKKMLVDMLFWAFD 102
SSTG+SLNHVPA G KDG+DKK+LVD++ WA D
Sbjct: 129 QIPSSVQQALSSTGVSLNHVPAVSNGLIILYVLDDGEHLTGVKDGSDKKLLVDIMLWAMD 188
Query: 103 NPPPGNYLLISGDQDFSDLLHRLRMKRYGILLAQPSNVSSRVLAAA 148
N P N +LISGD+DFS LLH+L MKRY ILLA+P S+ ++AAA
Sbjct: 189 NQAPANIMLISGDKDFSYLLHKLGMKRYNILLARPEKASTPLIAAA 234
>AT3G62210.1 | chr3:23026910-23028113 REVERSE LENGTH=280
Length = 279
Score = 134 bits (336), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 70/138 (50%), Positives = 83/138 (60%), Gaps = 1/138 (0%)
Query: 11 AKTSVWWDIDRCGVPPCCRDPHRXXXXXXXXXXXXXXXXXXSIFAYGDXXXXXXXXXXXX 70
AKTSVWWDI+ C VP D H SI AYGD
Sbjct: 22 AKTSVWWDIENCQVPKGL-DAHGIAQNISSALKKMNYCGRVSISAYGDTSGIPHVIQHAL 80
Query: 71 SSTGISLNHVPAGAKDGTDKKMLVDMLFWAFDNPPPGNYLLISGDQDFSDLLHRLRMKRY 130
+STGI L+HVPAG KD +DKK+LVDMLFWAFDNP P N +LISGD+DFS+ LH+L ++RY
Sbjct: 81 NSTGIELHHVPAGVKDASDKKILVDMLFWAFDNPAPSNIMLISGDRDFSNALHKLSLRRY 140
Query: 131 GILLAQPSNVSSRVLAAA 148
ILLA P S+ + AA
Sbjct: 141 NILLAHPPKASAPLSQAA 158
>AT5G09840.1 | chr5:3059027-3061970 FORWARD LENGTH=925
Length = 924
Score = 99.4 bits (246), Expect = 1e-21, Method: Composition-based stats.
Identities = 49/138 (35%), Positives = 72/138 (52%), Gaps = 1/138 (0%)
Query: 12 KTSVWWDIDRCGVPPCCRDPHRXXXXXXXXXXXXXXXXXXSIFAYGDXXXXXXXXXXXXS 71
+ SVWWD C +P + ++ +I A+GD S
Sbjct: 72 RVSVWWDFLSCNLP-VDTNVYKVAQSITAAIRNSGIKGPITITAFGDVLQLPRSNQDALS 130
Query: 72 STGISLNHVPAGAKDGTDKKMLVDMLFWAFDNPPPGNYLLISGDQDFSDLLHRLRMKRYG 131
+TGISL HVP G K+ D+ ++ D++ W NPPP + LLIS D++F+ +LHRLRM Y
Sbjct: 131 ATGISLTHVPNGGKNSADRSLITDLMCWVSQNPPPAHLLLISSDKEFASVLHRLRMNNYN 190
Query: 132 ILLAQPSNVSSRVLAAAA 149
ILLA S+ + +AA+
Sbjct: 191 ILLASKSSAPGVLCSAAS 208
>AT5G64710.1 | chr5:25869368-25872092 FORWARD LENGTH=842
Length = 841
Score = 97.4 bits (241), Expect = 4e-21, Method: Composition-based stats.
Identities = 48/138 (34%), Positives = 70/138 (50%), Gaps = 1/138 (0%)
Query: 12 KTSVWWDIDRCGVPPCCRDPHRXXXXXXXXXXXXXXXXXXSIFAYGDXXXXXXXXXXXXS 71
+ VWWD + C +P + + +I AYGD
Sbjct: 61 RVPVWWDFENCHLPSGA-NVFKLAQTITSAVRICGIKGPITITAYGDMIQLSRTNQEALF 119
Query: 72 STGISLNHVPAGAKDGTDKKMLVDMLFWAFDNPPPGNYLLISGDQDFSDLLHRLRMKRYG 131
+TGI+L HVP G K+ TD+ ++ +++ W NPPP + LIS D DF+++LHRLRM+ Y
Sbjct: 120 ATGINLTHVPQGGKNSTDRSLITEIMCWVSQNPPPAHLFLISSDSDFANVLHRLRMRNYN 179
Query: 132 ILLAQPSNVSSRVLAAAA 149
ILLA + VL +AA
Sbjct: 180 ILLACYEETTLGVLCSAA 197
>AT3G60940.1 | chr3:22521615-22523029 REVERSE LENGTH=258
Length = 257
Score = 77.4 bits (189), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 74/151 (49%), Gaps = 9/151 (5%)
Query: 9 AEAKTSVWWDIDRCGVPPCCRDPHRXXXXXXXXXXXXXXXXXXSIFAYGDXXXXXXXXXX 68
+ AKT VWWD + VP D +R SI A+G+
Sbjct: 79 STAKTQVWWDTENSPVPRGF-DAYRIGGNIRNALNENGYRGPISIRAFGNMRLIPTPIQL 137
Query: 69 XXSSTGISLNHVPAGA-------KDGTDKKMLVDMLFW-AFDNPPPGNYLLISGDQDFSD 120
+STGI L HVP KD +D K++ +L W A ++P P N ++I+GD+D+S
Sbjct: 138 ALTSTGIDLYHVPGNKVGSRKTIKDASDFKIIGHVLTWIALNHPQPSNLMVITGDRDYSV 197
Query: 121 LLHRLRMKRYGILLAQPSNVSSRVLAAAART 151
LH+LR + + ILLA P + +S L AA +
Sbjct: 198 ALHQLRCRSFNILLACPESSTSTALLRAATS 228
>AT2G15560.1 | chr2:6788319-6789788 REVERSE LENGTH=490
Length = 489
Score = 74.3 bits (181), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 61/135 (45%), Gaps = 1/135 (0%)
Query: 7 AAAEAKTSVWWDIDRCGVPPCCRDPHRXXXXXXXXXXXXXXXXXXSIF-AYGDXXXXXXX 65
++ + ++ WD++ C VP R F AYGD
Sbjct: 44 SSTDGPMAILWDMENCPVPSDVRPEDVASNIRMAIQLHPVISGPVVNFSAYGDFNGFPRR 103
Query: 66 XXXXXSSTGISLNHVPAGAKDGTDKKMLVDMLFWAFDNPPPGNYLLISGDQDFSDLLHRL 125
TG+ L VP G KD +DK +L+DM + DN PP +L+SGD DF+ LH L
Sbjct: 104 VREGCQRTGVKLIDVPNGRKDASDKAILIDMFLFVLDNKPPATIVLVSGDVDFAPALHIL 163
Query: 126 RMKRYGILLAQPSNV 140
+ Y ++L PS+V
Sbjct: 164 GQRGYTVILVIPSSV 178
>AT3G61028.2 | chr3:22581506-22584209 REVERSE LENGTH=255
Length = 254
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 53/115 (46%), Gaps = 3/115 (2%)
Query: 11 AKTSVWWDIDRCGVPPCCRDPHRXXXXXXXXXXXXXXXX-XXSIFAYGDXXXXXXXXXXX 69
AKT +WWD+D C +P DP+R SI A+G+
Sbjct: 80 AKTEIWWDVDSCRLPDSV-DPYRLVGNLRKSLNEKGYRGPITSINAFGNTNRIDETTMLA 138
Query: 70 XSSTGISLNHVPAGAKDGTDKKMLVDMLFWAFDN-PPPGNYLLISGDQDFSDLLH 123
S+TG+ H+P G K+ KK+LVD+L + DN P N +LIS S +H
Sbjct: 139 LSATGVYTRHIPDGRKESAHKKILVDLLCFGMDNIQQPCNIMLISARPGCSPKMH 193
>AT3G62050.1 | chr3:22978305-22978944 FORWARD LENGTH=158
Length = 157
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 59/130 (45%), Gaps = 13/130 (10%)
Query: 2 GDRAAAAAEAKTSVWWDIDRCGVPPCCRDPHRXXXXXXXXXXXXXXXXXXSIFAYGDXXX 61
GD AAA +T ++WDI+ C +P + S+ AYGD
Sbjct: 7 GDFAAA----ETGIFWDIEDCKIPDDL-NAGDALKNIKSALSSDGHHGTVSVRAYGDTTG 61
Query: 62 XXXXXXXXXSSTGISLNHVPAGAKDGTDKKMLVDMLFWAFDNPPPGNYLLISGD--QDFS 119
S GI LNH PAG + KML D++ W+ ++P P LI GD +DF
Sbjct: 62 LDF------PSEGIKLNHFPAGERYARQTKMLEDIVSWSAEHPEPSTLFLIVGDTSRDFL 115
Query: 120 DLLHRLRMKR 129
D++ L+ K+
Sbjct: 116 DVVQLLKSKK 125
>AT5G35640.1 | chr5:13834633-13835606 FORWARD LENGTH=193
Length = 192
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 59/128 (46%), Gaps = 4/128 (3%)
Query: 7 AAAEAKTSVWWDIDRCGVPPCCRDPHRXXXXXXXXXXXXXXXXXXSIFAYGDXXXXXXXX 66
+A A TSVWWDI+RC +P D R + A G
Sbjct: 28 SAGAAATSVWWDINRCPLPNDV-DVRRVSPFIKRALEKLGYTGALTTTAIGILTDVPHDF 86
Query: 67 XXXXSSTGISLNHVPAGAKDGTDKKMLVD-MLFWAFDNPPPGNYLLISGDQDFSDLLHRL 125
S+GI+++H+P ++ TD L +++W +DN PP N +LIS + FS LL +L
Sbjct: 87 LTQVYSSGIAIHHIPLVSE--TDIFELSSAVIYWTWDNLPPSNIMLISNELIFSSLLDKL 144
Query: 126 RMKRYGIL 133
Y ++
Sbjct: 145 CGFGYNVV 152
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.324 0.136 0.437
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 3,360,842
Number of extensions: 109749
Number of successful extensions: 334
Number of sequences better than 1.0e-05: 11
Number of HSP's gapped: 324
Number of HSP's successfully gapped: 11
Length of query: 180
Length of database: 11,106,569
Length adjustment: 92
Effective length of query: 88
Effective length of database: 8,584,297
Effective search space: 755418136
Effective search space used: 755418136
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 108 (46.2 bits)