BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0356400 Os03g0356400|009-148-D02
(203 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G13810.1 | chr5:4455769-4456593 FORWARD LENGTH=275 134 2e-32
AT3G57070.1 | chr3:21124174-21125427 FORWARD LENGTH=418 126 6e-30
AT2G41330.1 | chr2:17227067-17228275 FORWARD LENGTH=403 119 1e-27
AT5G58530.1 | chr5:23660428-23661249 FORWARD LENGTH=274 114 4e-26
AT5G39865.1 | chr5:15965560-15966732 REVERSE LENGTH=391 108 3e-24
AT5G03870.1 | chr5:1035813-1036967 REVERSE LENGTH=385 105 2e-23
AT5G06470.1 | chr5:1974659-1975378 REVERSE LENGTH=240 101 3e-22
AT3G28850.1 | chr3:10848669-10849955 FORWARD LENGTH=429 100 9e-22
AT1G32760.1 | chr1:11858251-11859195 FORWARD LENGTH=315 97 4e-21
AT1G64500.1 | chr1:23953270-23954376 FORWARD LENGTH=369 96 1e-20
AT4G10630.1 | chr4:6566625-6567629 REVERSE LENGTH=335 92 2e-19
AT5G01420.1 | chr5:174886-176091 REVERSE LENGTH=402 87 4e-18
AT3G11773.2 | chr3:3722989-3723659 REVERSE LENGTH=201 78 4e-15
>AT5G13810.1 | chr5:4455769-4456593 FORWARD LENGTH=275
Length = 274
Score = 134 bits (338), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 70/164 (42%), Positives = 96/164 (58%), Gaps = 3/164 (1%)
Query: 40 SFNARRQHHPQQQDHAVVLYTTSLRGVRRTFADCXXXXXXXXXXXXXXDERDVSMDASLR 99
S N P +D +V+Y TSLRG+RRT+ DC DERDVSMD + R
Sbjct: 114 SLNNSVIRLPGTEDR-IVVYFTSLRGIRRTYEDCYAVRMIFRGFRVWIDERDVSMDIAYR 172
Query: 100 RELQSLLAARGRPFSLPQLLVGARLVGGADEVRQLHEAGELRRLLEGAAGQDPAFXXXXX 159
+ELQ +A + SLPQ+ + + VGGAD ++ L E GEL ++L+ + P F
Sbjct: 173 KELQ--IAMGEKSVSLPQVFIMGKYVGGADVIKSLFEIGELAKILKEFPMRQPGFVCHCC 230
Query: 160 XXXRFVPCPACDGSRKVFVQEEGCARRCGDCNENGLVRCPNCCS 203
RFVPC C GS+K+F ++E +RC +CNENGL+RCP+C S
Sbjct: 231 GDIRFVPCSNCSGSKKLFDEDEDRVKRCPECNENGLIRCPDCSS 274
>AT3G57070.1 | chr3:21124174-21125427 FORWARD LENGTH=418
Length = 417
Score = 126 bits (317), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 63/150 (42%), Positives = 88/150 (58%)
Query: 53 DHAVVLYTTSLRGVRRTFADCXXXXXXXXXXXXXXDERDVSMDASLRRELQSLLAARGRP 112
+ +VLY T+LRG+R+T+ DC DERD+SMD+ R+ELQS+L A +P
Sbjct: 267 EDKIVLYFTTLRGIRKTYEDCCCVRAILRGVQVSVDERDISMDSKYRKELQSVLGAAEKP 326
Query: 113 FSLPQLLVGARLVGGADEVRQLHEAGELRRLLEGAAGQDPAFXXXXXXXXRFVPCPACDG 172
LPQ+ + +GG +E+ QL++ GEL +L+ + RFVPC CDG
Sbjct: 327 VCLPQVFIRGTHIGGVEEIMQLNDGGELAEMLKDFPACERLGTCRSCGDARFVPCTNCDG 386
Query: 173 SRKVFVQEEGCARRCGDCNENGLVRCPNCC 202
S KVF +++ +RC CNENGLVRC CC
Sbjct: 387 STKVFEEQDERFKRCPKCNENGLVRCRVCC 416
>AT2G41330.1 | chr2:17227067-17228275 FORWARD LENGTH=403
Length = 402
Score = 119 bits (297), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 59/153 (38%), Positives = 87/153 (56%), Gaps = 1/153 (0%)
Query: 50 QQQDHAVVLYTTSLRGVRRTFADCXXXXXXXXXXXXXXDERDVSMDASLRRELQSLLAAR 109
+ ++ +V+Y TSLRG+R+T+ DC +ERD+SMD+ R+ELQ+ L
Sbjct: 250 EDNENKIVVYFTSLRGIRKTYEDCCCVRAILRGFQVAVEERDISMDSKYRKELQNALGEE 309
Query: 110 GRPFSLPQLLVGARLVGGADEVRQLHEAGELRRLLEGAAGQDPAFXXXXXXXXRFVPCPA 169
+P LPQ+ + +GG +E++ L++ GEL +L+ + RFVPC
Sbjct: 310 -KPVCLPQVFIRGVRIGGIEEIKILNDGGELAEMLKDFPACESIGACDSCGDARFVPCTN 368
Query: 170 CDGSRKVFVQEEGCARRCGDCNENGLVRCPNCC 202
C GS KVF ++E +RC CNENGLVRC CC
Sbjct: 369 CGGSTKVFEEQEDGFKRCNGCNENGLVRCNKCC 401
>AT5G58530.1 | chr5:23660428-23661249 FORWARD LENGTH=274
Length = 273
Score = 114 bits (285), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 64/156 (41%), Positives = 86/156 (55%), Gaps = 9/156 (5%)
Query: 53 DHAVVLYTTSLRGVRRTFADCXXXXXXXXXXXXXXDERDVSMDASLRRELQSLLAA---- 108
+ ++V+Y TSLR VR TF C DERD+SMDAS ELQ +
Sbjct: 112 EKSIVVYFTSLRVVRPTFEACKSVTSILHSFPVRIDERDLSMDASFSTELQRIFGKDQNQ 171
Query: 109 ---RGRPFSLPQLLVGARLVGGADEVRQLHEAGELRRLLEGAAGQDPAFXXXXXXXXRFV 165
+ + LP++ +G R +GGA+EV+QLHE GEL++L++ +P RFV
Sbjct: 172 NQNQAKTPKLPRVFIGGRYIGGAEEVKQLHEIGELKKLVQELPKIEPGV-CEMCGGHRFV 230
Query: 166 PCPACDGSRKVFVQEEGCARRCGDCNENGLVRCPNC 201
PC C GS KV ++ G R C CNENGLVRC +C
Sbjct: 231 PCKDCHGSHKVHTEKLG-FRTCLTCNENGLVRCSSC 265
>AT5G39865.1 | chr5:15965560-15966732 REVERSE LENGTH=391
Length = 390
Score = 108 bits (269), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 63/163 (38%), Positives = 89/163 (54%), Gaps = 16/163 (9%)
Query: 56 VVLYTTSLRGVRRTFADCXXXXXXXXXXXXXXDERDVSMDASLRRELQSLLAAR---GRP 112
VVLY TSLRG+R+T+ DC DERDVSM + + EL+ LL + G
Sbjct: 227 VVLYFTSLRGIRKTYEDCCNIRIILKSLGIRIDERDVSMHSGFKDELKKLLEGKFNNGVG 286
Query: 113 FSLPQLLVGARLVGGADEVRQLHEAGELRRLL---EGAAGQDPAFXXXXXX--XXRFVPC 167
+LP++ +G + +GG +E+++L+E GEL +L+ E P F RFVPC
Sbjct: 287 ITLPRVFLGNKYLGGVEEIKKLNENGELEKLIKDCEMVEDGSPGFGNECEACGDVRFVPC 346
Query: 168 PACDGSRKVF----VQEEGCA----RRCGDCNENGLVRCPNCC 202
C GS K++ ++EG +RC CNENGL+RC CC
Sbjct: 347 ETCSGSCKLYHEGEEEDEGVTEYGFQRCPYCNENGLIRCHVCC 389
>AT5G03870.1 | chr5:1035813-1036967 REVERSE LENGTH=385
Length = 384
Score = 105 bits (262), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 81/150 (54%), Gaps = 3/150 (2%)
Query: 53 DHAVVLYTTSLRGVRRTFADCXXXXXXXXXXXXXXDERDVSMDASLRRELQSLLAARGRP 112
+H+VV+Y T+LRG+R+TF DC ERDVSM + + E++ ++ +
Sbjct: 236 EHSVVIYITTLRGIRKTFEDCNVVRSILDSHEVRFSERDVSMHSVFKEEIRGIMGTKH-- 293
Query: 113 FSLPQLLVGARLVGGADEVRQLHEAGELRRLLEGA-AGQDPAFXXXXXXXXRFVPCPACD 171
+P + V R+VG +EV +L E G+L LLEG A + RF+ C C+
Sbjct: 294 VKIPAVFVKGRMVGSVEEVMRLEEEGKLGILLEGIPAARLGGSCCRGCGGMRFMMCVVCN 353
Query: 172 GSRKVFVQEEGCARRCGDCNENGLVRCPNC 201
GS KV +E+ +C CNENGLV CP C
Sbjct: 354 GSCKVREEEKKSMVKCLKCNENGLVLCPIC 383
>AT5G06470.1 | chr5:1974659-1975378 REVERSE LENGTH=240
Length = 239
Score = 101 bits (251), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 87/164 (53%), Gaps = 12/164 (7%)
Query: 45 RQHHPQQQDHAVVLYTTSLRGVRRTFADCXXXXXXXXXXXXXXDERDVSMDASLRRELQS 104
+++ P + +VV YTT LR VR+TF C ERDVSMD+ R E+
Sbjct: 80 KENCPPGGEDSVVFYTTGLRSVRKTFEACRRVRFLLENHQVMYRERDVSMDSEFREEMWR 139
Query: 105 LLAARGRPFSLPQLLVGARLVGGADEVRQLHEAGELRRLLEGAAGQDPAFXXXXXXXXRF 164
LL G + P+L + R +GGA+EV L+E G+L++LL+G + D RF
Sbjct: 140 LL---GGKVTSPRLFIRGRYIGGAEEVVALNENGKLKKLLQGISQVDSP--CESCENERF 194
Query: 165 VPCPACDGSRKVFVQ-------EEGCARRCGDCNENGLVRCPNC 201
+ C +C+GS ++ + + RC +CNENGLV+CP C
Sbjct: 195 LICSSCNGSTRLLAEHHDEESSNDNMWTRCRECNENGLVKCPLC 238
>AT3G28850.1 | chr3:10848669-10849955 FORWARD LENGTH=429
Length = 428
Score = 99.8 bits (247), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 89/175 (50%), Gaps = 28/175 (16%)
Query: 56 VVLYTTSLRGVRRTFADCXXXXXXXXXXXXXXDERDVSMDASLRRELQSLLAA---RGRP 112
V+LY TSLRG+R+T+ + DERDVSM + + EL+ LL +G
Sbjct: 253 VILYFTSLRGIRKTYEESCDVRVILKSLGIRVDERDVSMHSGFKDELKELLGEKFNKGVG 312
Query: 113 FSLPQLLVGARLVGGADEVRQLHEAGELRRLLEGAAGQDP-----AFXXXXXXXXRFVPC 167
+LP++ +G + +GGA+E+R+L+E G+L +LL G + RFVPC
Sbjct: 313 ITLPRVFLGRKYIGGAEEIRKLNEDGKLEKLLGGCERVEENQNGNGLECEACGDVRFVPC 372
Query: 168 PACDGSRKVF------------------VQE--EGCARRCGDCNENGLVRCPNCC 202
C GS KV+ V+E E + C DCNENGL+RCP CC
Sbjct: 373 ETCSGSCKVYYEYEDDDDDDDEGDDDESVKEEREYGFQTCPDCNENGLIRCPVCC 427
>AT1G32760.1 | chr1:11858251-11859195 FORWARD LENGTH=315
Length = 314
Score = 97.4 bits (241), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 61/154 (39%), Positives = 79/154 (51%), Gaps = 5/154 (3%)
Query: 53 DHAVVLYTTSLRGVRRTFADCXXXXXXXXXXXXXXDERDVSMDASLRRELQSLLAARGRP 112
++ VV+YTTSLRGVRRTF C ERDVSMD R EL +L+A
Sbjct: 160 ENRVVIYTTSLRGVRRTFEACNAVRAAIESFGVVVCERDVSMDRGFREELSNLMAVESTA 219
Query: 113 FSL-PQLLVGARLVGGADEVRQLHEAGELRRLLEGAAGQD--PAFXXXXXXXXRFVPCPA 169
L P++ V + +GGA+EV +L E G L LL+ + F+PC
Sbjct: 220 AVLPPRVFVKGKYIGGAEEVMRLVEEGLLGELLKEIPRKKDRCGGGCGGCGGLAFLPCSG 279
Query: 170 CDGSRKVF--VQEEGCARRCGDCNENGLVRCPNC 201
C+GS KV + +C +CNENGLVRCP C
Sbjct: 280 CNGSCKVVEGWGNDAVVVKCKECNENGLVRCPIC 313
>AT1G64500.1 | chr1:23953270-23954376 FORWARD LENGTH=369
Length = 368
Score = 96.3 bits (238), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/157 (38%), Positives = 83/157 (52%), Gaps = 12/157 (7%)
Query: 54 HAVVLYTTSLRGVRRTFADCXXXXXXXXXXXXXXDERDVSMDASLRRELQSLLAARGRPF 113
+++YTTSL+GVRRT+ DC DERDVS+DA + EL+ LL
Sbjct: 212 EGLIVYTTSLQGVRRTYEDCMRVRAIMEQQGVVVDERDVSLDAGVLSELKELLQDEAS-V 270
Query: 114 SLPQLLVGARLVGGADEVRQLHEAGELRRLLEGA----AGQDPAFXXXXXXXXRFVPCPA 169
+ P++ V R +GGA EV ++E G+L R+L A G++ R++PC
Sbjct: 271 APPRVFVKGRYLGGAAEVTAMNENGKLGRVLRWARVERVGEEGRLTCEGCGGARWLPCFE 330
Query: 170 CDGSRKVFVQEEGCAR-----RCGDCNENGLVRCPNC 201
C GS KV G A+ RC CNENGL+RCP C
Sbjct: 331 CGGSCKVAAV--GAAKGERWERCVKCNENGLIRCPVC 365
>AT4G10630.1 | chr4:6566625-6567629 REVERSE LENGTH=335
Length = 334
Score = 92.0 bits (227), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/164 (40%), Positives = 83/164 (50%), Gaps = 12/164 (7%)
Query: 49 PQQQDHAVVLYTTSLRGVRRTFADCXXXXXXXXXXXXXXDERDVSMDASLRRELQSLLAA 108
P ++ VV+YTTSLRGVR+TF C ERDVSMD R EL SL+A
Sbjct: 171 PPGGENRVVMYTTSLRGVRQTFEACNAVRAAVESFGVVVCERDVSMDRRFREELVSLMAK 230
Query: 109 R----GRPFSLPQLLVGARLVGGADEVRQLHEAGELRRLLEGA----AGQDPAFXXXXXX 160
R G P++ V R +GG +EV +L E G L+ G AG +
Sbjct: 231 RVGDEGVAALPPRVFVKGRYIGGGEEVLRLVEEGSFGELISGIPRKKAGGCESGACDGCG 290
Query: 161 XXRFVPCPACDGSRKVFVQEEGCAR---RCGDCNENGLVRCPNC 201
F+PC C+GS K+ V+ G A RC +CNENGLV CP C
Sbjct: 291 GLFFLPCFRCNGSCKM-VKGWGSASVVVRCNECNENGLVPCPIC 333
>AT5G01420.1 | chr5:174886-176091 REVERSE LENGTH=402
Length = 401
Score = 87.4 bits (215), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/155 (37%), Positives = 76/155 (49%), Gaps = 7/155 (4%)
Query: 49 PQQQDHAVVLYTTSLRGVRRTFADCXXXXXXXXXXXXXXDERDVSMDASLRRELQSLLAA 108
P + +VV YTT+LRG+R+TF DC ERDVSM R EL+ + AA
Sbjct: 251 PPGGEESVVFYTTTLRGIRKTFDDCNMIRFLLDSFKVKYYERDVSMHREYREELRRISAA 310
Query: 109 RGRPFSLPQLLVGARLVGGADEVRQLHEAGELRRLLEG--AAGQDPAFXXXXXXXXRFVP 166
P L V R +GGA V LHE G+ + L EG G + RF+
Sbjct: 311 ETEVLP-PVLFVKGRCIGGAQRVLGLHEQGKFKILFEGIPITGDERC---RRCDGFRFLM 366
Query: 167 CPACDGSRKVFVQEEGCARRCGDCNENGLVRCPNC 201
C C GSR++ + +G +C CNENGL+ C C
Sbjct: 367 CDGCRGSRRI-ISGDGSRIQCLICNENGLIVCVGC 400
>AT3G11773.2 | chr3:3722989-3723659 REVERSE LENGTH=201
Length = 200
Score = 77.8 bits (190), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 63/113 (55%), Gaps = 5/113 (4%)
Query: 89 ERDVSMDASLRRELQSLLAARGRPFSLPQLLVGARLVGGADEVRQLHEAGELRRLLEGAA 148
ERDVSMD + E+ LL + P P+L + + +GGADEV L+E +L++LLE +
Sbjct: 92 ERDVSMDCEYKEEMWRLLGEQVTP---PRLFIKCKYIGGADEVVSLNENEKLKKLLEVFS 148
Query: 149 GQDPAFXXXXXXXXRFVPCPACDGSRKVFVQEEGCARRCGDCNENGLVRCPNC 201
+ RF+ C C+G +V + E +RC +CNENGLV+C C
Sbjct: 149 SA-KSRQCEMCENERFLICSKCNGRSRVVAEHET-WKRCIECNENGLVKCALC 199
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.322 0.138 0.433
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 3,897,307
Number of extensions: 132935
Number of successful extensions: 337
Number of sequences better than 1.0e-05: 13
Number of HSP's gapped: 300
Number of HSP's successfully gapped: 13
Length of query: 203
Length of database: 11,106,569
Length adjustment: 94
Effective length of query: 109
Effective length of database: 8,529,465
Effective search space: 929711685
Effective search space used: 929711685
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 109 (46.6 bits)