BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0353900 Os03g0353900|AK073188
(836 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G48410.2 | chr1:17886285-17891892 REVERSE LENGTH=1051 180 3e-45
AT2G27880.1 | chr2:11871488-11876712 FORWARD LENGTH=998 176 5e-44
AT5G43810.1 | chr5:17611939-17616562 FORWARD LENGTH=989 169 5e-42
AT1G69440.1 | chr1:26101565-26105016 REVERSE LENGTH=991 75 1e-13
AT5G21030.1 | chr5:7139892-7144272 REVERSE LENGTH=851 64 3e-10
AT5G21150.1 | chr5:7193472-7198113 FORWARD LENGTH=897 61 3e-09
AT2G27040.1 | chr2:11536795-11541503 REVERSE LENGTH=925 60 4e-09
AT2G32940.1 | chr2:13972218-13976856 REVERSE LENGTH=879 55 2e-07
>AT1G48410.2 | chr1:17886285-17891892 REVERSE LENGTH=1051
Length = 1050
Score = 180 bits (457), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 98/254 (38%), Positives = 153/254 (60%), Gaps = 4/254 (1%)
Query: 15 VINTKTTSSQTSRILPDELIKLHGFTTLGGKRPAYDGRESLYTNGSLPFESKESVVKVFD 74
I + TS +R + +L+ + + LG + PAYDGR+SLYT G LPF SKE + + D
Sbjct: 214 TITPEVTSRGVNRAVMKQLVDNYRDSHLGSRLPAYDGRKSLYTAGPLPFNSKEFRINLLD 273
Query: 75 PEKNAK-ERAQKEFKITIEIVGKTNLYHLQRFLLGKHRGIAQEIIHVFDVILSD-KLSR- 131
E A +R ++EFK+ I++V + +L+HL FL GK QE + V D++L + SR
Sbjct: 274 EEVGAGGQRREREFKVVIKLVARADLHHLGMFLEGKQSDAPQEALQVLDIVLRELPTSRI 333
Query: 132 NHVTGPRSFLCTQIGHQGYIGDGLDSWRGYHQSLRLRKIGISLNTDMSAASFMPVR-IIQ 190
++ RSF IG + +GDGL+SWRG++QS+R ++G+SLN DMS+ +F+ +IQ
Sbjct: 334 RYIPVGRSFYSPDIGKKQSLGDGLESWRGFYQSIRPTQMGLSLNIDMSSTAFIEANPVIQ 393
Query: 191 IIDGFLNISYTSRPLLERNRVQLKKVLCHVCIETNHHDDQIGRYKITGITPIPMSNNICP 250
+ LN +SRPL + +RV++KK L V +E H + +Y+I+G+T + P
Sbjct: 394 FVCDLLNRDISSRPLSDADRVKIKKALRGVKVEVTHRGNMRRKYRISGLTAVATRELTFP 453
Query: 251 VGEEGTTMTVLQYF 264
V E T +V++YF
Sbjct: 454 VDERNTQKSVVEYF 467
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 84/173 (48%), Gaps = 12/173 (6%)
Query: 182 SFMPVRIIQIIDGFLNISYTSRPLLERNRVQLKKVLCHVCIETNH---HDDQIGRYKITG 238
+++P+ + +I++G S+ L ER L KV C I+ Q+ Y
Sbjct: 492 NYLPMEVCKIVEG----QRYSKRLNERQITALLKVTCQRPIDREKDILQTVQLNDYAKDN 547
Query: 239 ITP---IPMSNNICPVGEEGTTMTVLQYF-CDMEKTGVPSVGHWNIAEEKIINGGALDNW 294
I +S ++ V L+Y E T +P VG WN+ +K+INGG ++NW
Sbjct: 548 YAQEFGIKISTSLASVEARILPPPWLKYHESGREGTCLPQVGQWNMMNKKMINGGTVNNW 607
Query: 295 TSLNLSRMRPEEVQR-FCSDLIQMCNATGMSFYPRPVVDFRSSHPNNIQNALR 346
+N SR + + R FC +L QMC +GM+F P PV+ S+ P ++ L+
Sbjct: 608 ICINFSRQVQDNLARTFCQELAQMCYVSGMAFNPEPVLPPVSARPEQVEKVLK 660
>AT2G27880.1 | chr2:11871488-11876712 FORWARD LENGTH=998
Length = 997
Score = 176 bits (446), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 103/257 (40%), Positives = 155/257 (60%), Gaps = 8/257 (3%)
Query: 16 INTKTTSSQTSRILPDELIKLHGFTTLGGKRPAYDGRESLYTNGSLPFESKESVVKVFDP 75
IN + S +R + L+K + + LGGK PAYDGR+SLYT G LPF+SKE VV + +
Sbjct: 183 INPEVISKTVNRNVMKLLVKNYKDSHLGGKSPAYDGRKSLYTAGPLPFDSKEFVVNLAEK 242
Query: 76 EKNAKERAQKEFKITIEIVGKTNLYHLQRFLLGKHRGIAQEIIHVFDVILSDKLSRNHVT 135
+ + FK+ ++ V T+LY LQ+FL K R + I V DV+L DK S ++V+
Sbjct: 243 RADGSSGKDRPFKVAVKNVTSTDLYQLQQFLDRKQREAPYDTIQVLDVVLRDKPSNDYVS 302
Query: 136 GPRSFLCTQIGH-----QGYIGDGLDSWRGYHQSLRLRKIGISLNTDMSAASFM-PVRII 189
RSF T +G +G +GDG++ WRGY QSLRL ++G+SLN D+SA SF P+ +
Sbjct: 303 VGRSFFHTSLGKDARDGRGELGDGIEYWRGYFQSLRLTQMGLSLNIDVSARSFYEPIVVT 362
Query: 190 QIIDGFLNISYTSRPLLERNRVQLKKVLCHVCIETNHHDDQIGRYKITGITPIPMSNNIC 249
I FLNI +RPL + +R+++KKVL + ++ H + KI+GI+ +P+ +
Sbjct: 363 DFISKFLNIRDLNRPLRDSDRLKVKKVLRTLKVKLLHWNG-TKSAKISGISSLPI-RELR 420
Query: 250 PVGEEGTTMTVLQYFCD 266
E+ + TV+QYF +
Sbjct: 421 FTLEDKSEKTVVQYFAE 437
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 89/181 (49%), Gaps = 23/181 (12%)
Query: 183 FMPVRIIQIIDGFLNISYTSRPLLERNRVQLKKVLC-----------HVCIETNHHDDQI 231
++P+ + QI +G YT R L E+ L K C ++ ++ N++DD
Sbjct: 461 YLPMELCQIDEG---QRYTKR-LNEKQVTALLKATCQRPPDRENSIKNLVVKNNYNDDLS 516
Query: 232 GRYKITGITPIPMSNNICPVGEEGTTMTVLQYF-CDMEKTGVPSVGHWNIAEEKIINGGA 290
+ ++ ++ + + +L+Y EK P +G WN+ ++K++NG
Sbjct: 517 KEFGMS------VTTQLASIEARVLPPPMLKYHDSGKEKMVNPRLGQWNMIDKKMVNGAK 570
Query: 291 LDNWTSLNLS-RMRPEEVQRFCSDLIQMCNATGMSFYPRPVVDFRSSHPNNIQNALRDVH 349
+ +WT ++ S R+ Q FC LI MC + GM F P+P + F S P +I+ AL D+H
Sbjct: 571 VTSWTCVSFSTRIDRGLPQEFCKQLIGMCVSKGMEFKPQPAIPFISCPPEHIEEALLDIH 630
Query: 350 R 350
+
Sbjct: 631 K 631
>AT5G43810.1 | chr5:17611939-17616562 FORWARD LENGTH=989
Length = 988
Score = 169 bits (429), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 90/256 (35%), Positives = 150/256 (58%), Gaps = 5/256 (1%)
Query: 16 INTKTTSSQTSRILPDELIKLHGFTTLGGKRPAYDGRESLYTNGSLPFESKESVVKVFDP 75
I + +S +R + EL++L+ + LG + PAYDGR+SLYT G LPF KE VK+ D
Sbjct: 164 ITPEVSSKSVNRAIIAELVRLYKESDLGRRLPAYDGRKSLYTAGELPFTWKEFSVKIVDE 223
Query: 76 EK---NAKERAQKEFKITIEIVGKTNLYHLQRFLLGKHRGIAQEIIHVFDVILSDKLSRN 132
+ N +R ++ +K+ I+ V + N++HL FL GK QE + + D++L + +
Sbjct: 224 DDGIINGPKR-ERSYKVAIKFVARANMHHLGEFLAGKRADCPQEAVQILDIVLRELSVKR 282
Query: 133 HVTGPRSFLCTQIGHQGYIGDGLDSWRGYHQSLRLRKIGISLNTDMSAASFM-PVRIIQI 191
RSF I +G+GL+SW G++QS+R ++G+SLN DM++A+F+ P+ +I+
Sbjct: 283 FCPVGRSFFSPDIKTPQRLGEGLESWCGFYQSIRPTQMGLSLNIDMASAAFIEPLPVIEF 342
Query: 192 IDGFLNISYTSRPLLERNRVQLKKVLCHVCIETNHHDDQIGRYKITGITPIPMSNNICPV 251
+ L S+PL + +RV++KK L V +E H + +Y++ G+T P + PV
Sbjct: 343 VAQLLGKDVLSKPLSDSDRVKIKKGLRGVKVEVTHRANVRRKYRVAGLTTQPTRELMFPV 402
Query: 252 GEEGTTMTVLQYFCDM 267
E T +V++YF +M
Sbjct: 403 DENCTMKSVIEYFQEM 418
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 89/180 (49%), Gaps = 18/180 (10%)
Query: 181 ASFMPVRIIQIIDGFLNISYTSRPLLERNRVQLKKVLCHV-------CIETNHHD--DQI 231
AS++P+ +I++G YT R L E+ L KV C + T H+ DQ
Sbjct: 439 ASYLPMEACKIVEG---QRYTKR-LNEKQITALLKVTCQRPRDRENDILRTVQHNAYDQD 494
Query: 232 GRYKITGITPIPMSNNICPVGEEGTTMTVLQYFCD-MEKTGVPSVGHWNIAEEKIINGGA 290
K G+ +S + V L+Y + EK +P VG WN+ +K+ING
Sbjct: 495 PYAKEFGMN---ISEKLASVEARILPAPWLKYHENGKEKDCLPQVGQWNMMNKKMINGMT 551
Query: 291 LDNWTSLNLSRMRPEEVQR-FCSDLIQMCNATGMSFYPRPVVDFRSSHPNNIQNALRDVH 349
+ W +N SR E V R FC++L QMC +GM F P PV+ S+ P+ ++ AL+ V+
Sbjct: 552 VSRWACVNFSRSVQENVARGFCNELGQMCEVSGMEFNPEPVIPIYSARPDQVEKALKHVY 611
>AT1G69440.1 | chr1:26101565-26105016 REVERSE LENGTH=991
Length = 990
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 126/268 (47%), Gaps = 32/268 (11%)
Query: 22 SSQTSRILPDELIKLHGFTTLGGKRPAYDGRESLYTNG-----------SLPFESKESVV 70
S + +R++ +L++ + G PA+DGR+++Y+ +LP S ++V+
Sbjct: 193 SKEIARMIKQKLVETDR-NSFSGVVPAFDGRQNIYSPVEFQGDRLEFFVNLPIPSCKAVM 251
Query: 71 KVFD-PEKNAKERAQKEFKITIEIVGKTNLYHLQRFLLGKHRGIAQEIIHVFDVILSDKL 129
D EK +++ +K F++ +++V K + QR + E IH DVIL +
Sbjct: 252 NYGDLREKQPQKKIEKLFRVNMKLVSKFDGKE-QRKEGEDWAPLPPEYIHALDVILRENP 310
Query: 130 SRNHVTGPRSFLCTQIGHQGYIGDGLDSWRGYHQSLRLRKIGISLNTDMSAASFM-PVRI 188
+ RSF + +G IG G RG+ QSLR + G++LN D+S +F + +
Sbjct: 311 MEKCTSIGRSFYSSSMGGSKEIGGGAVGLRGFFQSLRHTQQGLALNMDLSITAFHESIGV 370
Query: 189 IQIIDGFLNISYTSRP--------LLERNRVQ--LKKVLCHVCIETNHHDDQIGRYKITG 238
I + L T P L E+ V+ LK + VC H + + RY++ G
Sbjct: 371 IAYLQKRLEF-LTDLPRNKGRELSLEEKREVEKALKNIRVFVC-----HRETVQRYRVYG 424
Query: 239 ITPIPMSNNICPVGEEGTTMTVLQYFCD 266
+T ++ NI EG + ++ YF D
Sbjct: 425 LTE-EITENIWFPDREGKYLRLMSYFKD 451
>AT5G21030.1 | chr5:7139892-7144272 REVERSE LENGTH=851
Length = 850
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 99/208 (47%), Gaps = 15/208 (7%)
Query: 42 LGGKRPAYDGRESLYTNGSLPFESKE-SVVKVFDPEK-NAKERAQ-----KEFKITIEIV 94
LG K AYDG ++LYT G LP S + SVV P + NA +R + K+F + I
Sbjct: 92 LGCKHFAYDGDKNLYTVGPLPRSSLDFSVVLETAPSRRNADKRLKLPHQSKKFNVAILFA 151
Query: 95 G-KTNLYHLQRFLLGKHRGIAQEIIHVFDVILSDKLSRNHVTGPR-SFLCTQIGHQGYIG 152
+ + + L GK + I V D ILS +R R SF + IG
Sbjct: 152 PPEIPMEAIANALQGKKTKHLLDAIRVMDCILSQNAARQGCLLVRQSFFHNDAKYFANIG 211
Query: 153 DGLDSWRGYHQSLRLRKIGISLNTDMSAASFMPVRIIQIIDGFLNISYTSRPLLERNRVQ 212
+G+D +G+H S R + G+SLN D+S A M V+ ++D + + P N +
Sbjct: 212 EGVDCCKGFHSSFRTTQGGLSLNIDVSTA--MIVKPGPVVDFLIANQGVNDP-FSINWKK 268
Query: 213 LKKVLCHVCIETNHHDDQIGRYKITGIT 240
K L ++ ++ + + YKITG++
Sbjct: 269 AKNTLKNLRVKVLPSNQE---YKITGLS 293
>AT5G21150.1 | chr5:7193472-7198113 FORWARD LENGTH=897
Length = 896
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 98/219 (44%), Gaps = 25/219 (11%)
Query: 40 TTLGGKRPAYDGRESLYTNGSLPFESKESVVKV----------------FDPEKNAKERA 83
+ LG K AYDG ++L+T G+LP + V + D +++ +
Sbjct: 102 SDLGAKYFAYDGEKTLFTVGALPSNKLDFSVVLEEIPSSRNHAGNDTNDADRKRSRRPNQ 161
Query: 84 QKEFKITIEIVGKTNLYHLQRFLLGKHRGIAQEIIHVFDVILSDKLSRNHVTGPR-SFLC 142
K+F + I K + + L GK Q+ + V D+IL +R R SF
Sbjct: 162 TKKFMVEISYAAKIPMQAIASALQGKETENLQDALRVLDIILRQSAARQGCLLVRQSFFH 221
Query: 143 TQIGHQGYIGDGLDSWRGYHQSLRLRKIGISLNTDMSAASFMPVRIIQIIDGFLNISYTS 202
+ + IG G+ RG+H S R + G+SLN D S M V+ ++D L
Sbjct: 222 NDVKNFVPIGGGVSGCRGFHSSFRTTQGGLSLNIDTSTT--MIVQPGPVVDFLLANQNKK 279
Query: 203 RPL-LERNRVQLKKVLCHVCIETNHHDDQIGRYKITGIT 240
P ++ N+ ++VL ++ ++ + + YKI+G++
Sbjct: 280 DPYGMDWNKA--RRVLKNLRVQITLSNRE---YKISGLS 313
>AT2G27040.1 | chr2:11536795-11541503 REVERSE LENGTH=925
Length = 924
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 111/259 (42%), Gaps = 38/259 (14%)
Query: 40 TTLGGKRPAYDGRESLYTNGSLPFESKESVVKVFD-----------------PEKNAKER 82
+ L GK AYDG ++L+T G+LP + V + + P ++R
Sbjct: 121 SDLDGKEFAYDGEKTLFTYGALPSNKMDFSVVLEEVSATRANGNGSPNGNESPSDGDRKR 180
Query: 83 AQ-----KEFKITIEIVGKTNLYHLQRFLLGKHRGIAQEIIHVFDVILSDKLSRNHVTGP 137
+ K F++ I K L L + G+ +QE I V D+IL +R
Sbjct: 181 LRRPNRSKNFRVEISYAAKIPLQALANAMRGQESENSQEAIRVLDIILRQHAARQGCLLV 240
Query: 138 R-SFLCTQIGHQGYIGDGLDSWRGYHQSLRLRKIGISLNTDMSAASFMPVRIIQIIDGFL 196
R SF + +G + RG+H S R + G+SLN D++ M ++ ++D FL
Sbjct: 241 RQSFFHNDPTNCEPVGGNILGCRGFHSSFRTTQGGMSLNMDVTTT--MIIKPGPVVD-FL 297
Query: 197 NISYTSRPLLERNRVQLKKVLCHVCIETNHHDDQIGRYKITGITPIP--------MSNNI 248
+ +R + + K+ L ++ ++ + + +KITG++ P N
Sbjct: 298 IANQNARDPYSIDWSKAKRTLKNLRVKVSPSGQE---FKITGLSDKPCREQTFELKKRNP 354
Query: 249 CPVGE-EGTTMTVLQYFCD 266
GE E T +TV YF D
Sbjct: 355 NENGEFETTEVTVADYFRD 373
>AT2G32940.1 | chr2:13972218-13976856 REVERSE LENGTH=879
Length = 878
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 109/248 (43%), Gaps = 37/248 (14%)
Query: 26 SRILPDELIKLHGFTTLGGKRPAYDGRESLYTNGSLP-------------FESKESVVKV 72
SR L D+L K + + L GKR AYDG ++LYT G LP F ++ V
Sbjct: 78 SRKLMDQLFKTYS-SDLDGKRLAYDGEKTLYTVGPLPQNEFDFLVIVEGSFSKRDCGVSD 136
Query: 73 FDPEKNAKERAQKEF-----KITIEIVGKTNLYHLQRFLLGKHRGI------AQEIIHVF 121
+R+++ F K+ I + L + +LG RG AQ+ + V
Sbjct: 137 GGSSSGTCKRSKRSFLPRSYKVQIHYAAEIPL----KTVLGTQRGAYTPDKSAQDALRVL 192
Query: 122 DVILSDKLSRNHVTGPRSFLCTQIGHQGYIGDGLDSWRGYHQSLRLRKIGISLNTDMSAA 181
D++L + + R GH +G G+ RG H S R G+SLN D+S
Sbjct: 193 DIVLRQQAAERGCLLVRQAFFHSDGHPMKVGGGVIGIRGLHSSFRPTHGGLSLNIDVSTT 252
Query: 182 SFM-PVRIIQIIDGFLNISYTSRPLLERNRVQLKKVLCHVCIETNHHDDQIGRYKITGIT 240
+ P +I+ FL + + + + ++ K+L H+ ++ H + + +KI G++
Sbjct: 253 MILEPGPVIE----FLKANQSVETPRQIDWIKAAKMLKHMRVKATHRNME---FKIIGLS 305
Query: 241 PIPMSNNI 248
P + +
Sbjct: 306 SKPCNQQL 313
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.321 0.137 0.419
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 19,051,851
Number of extensions: 845441
Number of successful extensions: 1776
Number of sequences better than 1.0e-05: 8
Number of HSP's gapped: 1761
Number of HSP's successfully gapped: 11
Length of query: 836
Length of database: 11,106,569
Length adjustment: 107
Effective length of query: 729
Effective length of database: 8,173,057
Effective search space: 5958158553
Effective search space used: 5958158553
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 116 (49.3 bits)