BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0352400 Os03g0352400|AK105418
(535 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G52980.1 | chr1:19737493-19740201 FORWARD LENGTH=577 779 0.0
AT3G07050.1 | chr3:2229602-2232279 REVERSE LENGTH=583 213 2e-55
AT2G27200.1 | chr2:11625449-11627959 FORWARD LENGTH=538 143 2e-34
AT1G08410.1 | chr1:2646307-2649106 FORWARD LENGTH=590 135 5e-32
AT4G02790.1 | chr4:1247416-1249351 FORWARD LENGTH=373 82 9e-16
AT2G41670.1 | chr2:17374118-17376177 FORWARD LENGTH=387 54 2e-07
AT3G12080.1 | chr3:3847851-3851980 FORWARD LENGTH=664 49 1e-05
>AT1G52980.1 | chr1:19737493-19740201 FORWARD LENGTH=577
Length = 576
Score = 779 bits (2011), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/520 (74%), Positives = 448/520 (86%), Gaps = 10/520 (1%)
Query: 4 KKERAVNVSGKPRHSLDVNRANDKKXXXXXXXXXXXXRSAATVRRLKMYKMRPLRDRGGK 63
KKE+ NVSGKP+HSLD NRA+ KK RS +TV RLKMYK RP R+ GGK
Sbjct: 3 KKEKKANVSGKPKHSLDANRADGKKKTTET-------RSKSTVNRLKMYKTRPKRNAGGK 55
Query: 64 ILKHDLQSKELPNTRIEPDRRWFGNTRVVNQKELEFFREELQSRLSNNYNVILKERKLPL 123
IL ++ QSKELPN+RI PDRRWFGNTRVVNQKELE+FREELQ+++S+NYNVILKERKLP+
Sbjct: 56 ILSNEYQSKELPNSRIAPDRRWFGNTRVVNQKELEYFREELQTKMSSNYNVILKERKLPM 115
Query: 124 SLLQDHQKQARAHLLDTEPFEHAFGPKGKRKRPKLMALDYESLLKKADDSQGAFEDKHAT 183
SLL D++KQ+R HLLD EPF+ AFG K KRKRPKL+A DYE+L+KKA +SQ AFE+K+
Sbjct: 116 SLLTDNKKQSRVHLLDMEPFQDAFGRKTKRKRPKLVASDYEALVKKAAESQDAFEEKNGA 175
Query: 184 AKLLKEEEEDG-LRDLVRHTMFEKGQSKRIWGELYKVIDSSDVVVQVLDARDPMGTRCYH 242
+ EE+ RDLVRHTMFEKGQSKRIWGELYKVIDSSDV+VQV+DARDP GTRC+H
Sbjct: 176 GPSGEGGEEEDGFRDLVRHTMFEKGQSKRIWGELYKVIDSSDVIVQVIDARDPQGTRCHH 235
Query: 243 LEKHLKENAKHKHLVFLLNKCDLVPAWATKGWLRTLSKDYPTLAFHASINSSFGKGSLLS 302
LEK LKE+ KHKH++ LLNKCDLVPAWATKGWLR LSK+YPTLAFHAS+N SFGKGSLLS
Sbjct: 236 LEKTLKEHHKHKHMILLLNKCDLVPAWATKGWLRVLSKEYPTLAFHASVNKSFGKGSLLS 295
Query: 303 VLRQFARLKSDKQAISVGFVGYPNVGKSSVINTLRSKSVCKVAPIPGETKVWQYITLTKR 362
VLRQFARLKSDKQAISVGFVGYPNVGKSSVINTLR+K+VCKVAPIPGETKVWQYITLTKR
Sbjct: 296 VLRQFARLKSDKQAISVGFVGYPNVGKSSVINTLRTKNVCKVAPIPGETKVWQYITLTKR 355
Query: 363 IFLIDCPGVVYQNNDSETDIVLKGVVRVTNLADASEHIGEVLRRVKKEHLKRAYKIEDWV 422
IFLIDCPGVVYQ+ D+ETDIVLKGVVRVTNL DASEHIGEVLRRVKKEHL+RAYKI+DW
Sbjct: 356 IFLIDCPGVVYQSRDTETDIVLKGVVRVTNLEDASEHIGEVLRRVKKEHLQRAYKIKDWE 415
Query: 423 DDNDFLVQLSKTTGKLLRGGEPDLTTTAKMVLHDWQRGKIPFFVPPPQQGEDSPSETAEP 482
DD+DFL+QL K++GKLL+GGEPDL T AKM+LHDWQRG+IPFFVPPP+ ++ SE+
Sbjct: 416 DDHDFLLQLCKSSGKLLKGGEPDLMTGAKMILHDWQRGRIPFFVPPPKL-DNVASESEVI 474
Query: 483 VEKSDEEGVSSD-RTAAAMKAIAGIISSQQQMNVPCQKEF 521
V D+E ++ + + AAA+KAIAGI+S+QQQ +VP Q++F
Sbjct: 475 VPGIDKEAIADNSQAAAALKAIAGIMSTQQQKDVPVQRDF 514
>AT3G07050.1 | chr3:2229602-2232279 REVERSE LENGTH=583
Length = 582
Score = 213 bits (542), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 111/313 (35%), Positives = 176/313 (56%), Gaps = 24/313 (7%)
Query: 191 EEDGLRDLVRHTMFEKGQSKRIWGELYKVIDSSDVVVQVLDARDPMGTRCYHLEKHLKEN 250
E + + DL + + + EL KVI+ SDV+++VLDARDP+GTRC +E+ + +
Sbjct: 105 EGETIEDLPKVVNVRDNSERAFYKELVKVIELSDVILEVLDARDPLGTRCTDMERMVMQA 164
Query: 251 AKHKHLVFLLNKCDLVPAWATKGWLRTLSKDYPTLAFHAS-------------------- 290
+KHLV LLNK DLVP A + WL L +++P +AF S
Sbjct: 165 GPNKHLVLLLNKIDLVPREAAEKWLMYLREEFPAVAFKCSTQEQRSNLGWKSSKASKPSN 224
Query: 291 ---INSSFGKGSLLSVLRQFARLKSDKQAISVGFVGYPNVGKSSVINTLRSKSVCKVAPI 347
+ G +L+ +L+ ++R K++I+VG +G PNVGKSS+IN+L+ V V
Sbjct: 225 MLQTSDCLGADTLIKLLKNYSRSHELKKSITVGIIGLPNVGKSSLINSLKRAHVVNVGAT 284
Query: 348 PGETKVWQYITLTKRIFLIDCPGVVY-QNNDSETDIVLKGVVRVTNLADASEHIGEVLRR 406
PG T+ Q + L K + L+DCPGVV +++ ++ I L+ R+ L D + E+L+
Sbjct: 285 PGLTRSLQEVHLDKNVKLLDCPGVVMLKSSGNDASIALRNCKRIEKLDDPVSPVKEILKL 344
Query: 407 VKKEHLKRAYKIEDWVDDNDFLVQLSKTTGKLLRGGEPDLTTTAKMVLHDWQRGKIPFFV 466
K+ L YKI + +DFL +++ GKL +GG D+ A++VLHDW GKIP++
Sbjct: 345 CPKDMLVTLYKIPSFEAVDDFLYKVATVRGKLKKGGLVDIDAAARIVLHDWNEGKIPYYT 404
Query: 467 PPPQQGEDSPSET 479
PP++ + +E+
Sbjct: 405 MPPKRDQGGHAES 417
>AT2G27200.1 | chr2:11625449-11627959 FORWARD LENGTH=538
Length = 537
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 94/335 (28%), Positives = 162/335 (48%), Gaps = 57/335 (17%)
Query: 202 TMFEKGQSKRIWGELYKVIDSSDVVVQVLDARDPMGTRCYHLEKHLKENAKHKHLVFLLN 261
T FEK IW +L++V++ SD++V V+DARDP+ RC LE + +E +HK + L+N
Sbjct: 149 TPFEKNLD--IWRQLWRVLERSDLIVMVVDARDPLFYRCPDLEAYAQEIDEHKKTMLLVN 206
Query: 262 KCDLVPAWATKGWLRTLSKDYPTLAFHASINSS--------------------------- 294
K DL+P++ + W S++ F ++ ++
Sbjct: 207 KADLLPSYVREKWAEYFSRNNILFVFWSAKAATATLEGKPLKEQWRAPDTTQKTDNPAVK 266
Query: 295 -FGKGSLLSVLR----QFARLKSDK-----------QAISVGFVGYPNVGKSSVINTLRS 338
+G+ LL L+ + +++ + + + VGFVGYPNVGKSS IN L
Sbjct: 267 VYGRDDLLDRLKLEALEIVKMRKSRGVSATSTESHCEQVVVGFVGYPNVGKSSTINALVG 326
Query: 339 KSVCKVAPIPGETKVWQYITLTKRIFLIDCPGVVYQN-NDSETDIVLKGVVRVTNLADAS 397
+ V PG+TK +Q + +++ + L DCPG+V+ + + S ++V GV+ + + +
Sbjct: 327 QKRTGVTSTPGKTKHFQTLIISEDLMLCDCPGLVFPSFSSSRYEMVASGVLPIDRMTEHL 386
Query: 398 EHIGEVLRRVKKEHLKRAYKI-----EDWVDD------NDFLVQLSKTTGKLLRGGEPDL 446
E I V V + ++ Y I + + ++ L + G + G PD
Sbjct: 387 EAIKVVAELVPRHAIEDVYNISLPKPKSYEPQSRPPLASELLRTYCLSRGYVASSGLPDE 446
Query: 447 TTTAKMVLHDWQRGKIPFFVPPPQQGEDSPSETAE 481
T A+ +L D+ GK+P F PP+ D +ETA+
Sbjct: 447 TRAARQILKDYIEGKLPHFAMPPEITRDDENETAD 481
>AT1G08410.1 | chr1:2646307-2649106 FORWARD LENGTH=590
Length = 589
Score = 135 bits (341), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 97/358 (27%), Positives = 163/358 (45%), Gaps = 62/358 (17%)
Query: 202 TMFEKGQSKRIWGELYKVIDSSDVVVQVLDARDPMGTRCYHLEKHLKENAKHKHLVFLLN 261
T FEK IW +L++V++ SD++V V+DARDP+ RC LE + +E +HK ++ L+N
Sbjct: 149 TPFEKNLD--IWRQLWRVLERSDLIVMVVDARDPLFYRCPDLEAYAQEIDEHKKIMLLVN 206
Query: 262 KCDLVPAWATKGWLRTLSKDYPTLAFHASINSS--------------------------- 294
K DL+P + W + F ++I ++
Sbjct: 207 KADLLPTDVREKWAEYFRLNNILFVFWSAIAATATLEGKVLKEQWRQPDNLQKTDDPDIM 266
Query: 295 -FGKGSLLSVLR----QFARLKSDKQA---------------ISVGFVGYPNVGKSSVIN 334
+G+ LLS L+ + ++++ + A VGFVGYPNVGKSS IN
Sbjct: 267 IYGRDELLSRLQFEAQEIVKVRNSRAASVSSQSWTGEYQRDQAVVGFVGYPNVGKSSTIN 326
Query: 335 TLRSKSVCKVAPIPGETKVWQYITLTKRIFLIDCPGVVYQN-NDSETDIVLKGVVRVTNL 393
L + V PG+TK +Q + ++ + L DCPG+V+ + + S +++ GV+ + +
Sbjct: 327 ALVGQKRTGVTSTPGKTKHFQTLIISDELMLCDCPGLVFPSFSSSRYEMIASGVLPIDRM 386
Query: 394 ADASEHIGEVLRRVKKEHLKRAYKI-----------EDWVDDNDFLVQLSKTTGKLLRGG 442
+ E I V +V + ++ Y I + L + G + G
Sbjct: 387 TEHREAIQVVADKVPRRVIESVYNISLPKPKTYERQSRPPHAAELLKSYCASRGYVASSG 446
Query: 443 EPDLTTTAKMVLHDWQRGKIPFFVPPPQQGEDSPSETAEPVEKSD-EEGVSSDRTAAA 499
PD T A+++L D+ GK+P + PP + + + E D EG SD +A
Sbjct: 447 LPDETKAARLILKDYIGGKLPHYAMPPGMPQADEPDIEDTQELEDILEGSESDDSAVG 504
>AT4G02790.1 | chr4:1247416-1249351 FORWARD LENGTH=373
Length = 372
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 125/282 (44%), Gaps = 26/282 (9%)
Query: 199 VRHTMFEKGQSKRIWGELYKVIDSSDVVVQVLDARDPMGTRCYHLEKHLKENAKHKHLVF 258
+R + G + EL + + DVV++V DAR P+ T ++ L + +
Sbjct: 93 LRPVQWYPGHIMKTEKELREQLKLMDVVIEVRDARIPLSTTHPKMDAWLGNRKR----IL 148
Query: 259 LLNKCDLVPAWATKGWLRTLSKDYPTLAFHASINSSFGKGSLLSVLRQFARLKSD----- 313
+LN+ D++ W R +K + F N G G++ + R L D
Sbjct: 149 VLNREDMISNDDRNDWARYFAKQGIKVIF---TNGKLGMGAM-KLGRLAKSLAGDVNGKR 204
Query: 314 ------KQAISVGFVGYPNVGKSSVINTLRSKSVCKVAPIPGETKVWQYITLTKRIFLID 367
+++ G +GYPNVGKSS+IN L + +C AP PG T+ +++ L K + L+D
Sbjct: 205 REKGLLPRSVRAGIIGYPNVGKSSLINRLLKRKICAAAPRPGVTREMKWVKLGKDLDLLD 264
Query: 368 CPGVVYQNNDSETDIVLKGVV-----RVTNLADASEHIGEVLRRVKKEHLKRAYKIEDWV 422
PG++ D + + + + + D + + ++L R+ + K Y
Sbjct: 265 SPGMLPMRIDDQAAAIKLAICDDIGEKAYDFTDVAGILVQMLARIPEVGAKALYNRYKIQ 324
Query: 423 DDNDFLVQLSKTTGKLLRGGEPDLTTTAKMVLHDWQRGKIPF 464
+ + + KT G L GG D A +L D+++GK +
Sbjct: 325 LEGNCGKKFVKTLGLNLFGG--DSHQAAFRILTDFRKGKFGY 364
>AT2G41670.1 | chr2:17374118-17376177 FORWARD LENGTH=387
Length = 386
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 86/178 (48%), Gaps = 22/178 (12%)
Query: 223 SDVVVQVLDARDPMGTRCYHLEKHLKENAKHKHLVFLLNKCDLVPAWATKGWLRTL-SKD 281
SD+V++V DAR P+ + L+ + +AK + + LNK DL W R S
Sbjct: 47 SDLVIEVRDARIPLSSANEDLQSQM--SAKRR--IIALNKKDLANPNVLNKWTRHFESSK 102
Query: 282 YPTLAFHASINSSFGKGSLLSVLR-QFARLKSDKQAISVGFVGYPNVGKSSVINTLRSKS 340
+A +A SS K LL ++ + + + + + V VG PNVGKS++IN++ +
Sbjct: 103 QDCIAINAHSRSSVMK--LLDLVELKLKEVIAREPTLLVMVVGVPNVGKSALINSIHQIA 160
Query: 341 VCK-----------VAPIPGETKVWQYITLTKR--IFLIDCPGVVYQN-NDSETDIVL 384
+ V P+PG T+ + R I+++D PGV+ + D ET + L
Sbjct: 161 AARFPVQERLKRATVGPLPGVTQDIAGFKIAHRPSIYVLDSPGVLVPSIPDIETGLKL 218
>AT3G12080.1 | chr3:3847851-3851980 FORWARD LENGTH=664
Length = 663
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 96/222 (43%), Gaps = 28/222 (12%)
Query: 220 IDSSDVVVQVLDARDPMGTRCYHLEKHLKENAKHKHLVFLLNKCDLVPAWATKGWLRTLS 279
+D S V++ V+D + + L++ HK+++ +NKC+ KG ++ +
Sbjct: 265 VDESAVIIFVVDGQAGPSGADVEIADWLRKYYSHKYIILAVNKCE----SPRKGLMQ--A 318
Query: 280 KDYPTLAFH---ASINSSFGKGSLLS-VLRQFARLKSDKQAI---------SVGFVGYPN 326
++ +L F S S G G LL V +L+ + ++ +G PN
Sbjct: 319 SEFWSLGFTPIPISALSGTGTGELLDLVCSGLIKLEIMENIEEEEEENYIPAIAIIGRPN 378
Query: 327 VGKSSVINTLRSKSVCKVAPIPGETKVWQYITLT----KRIFLIDCPGV-----VYQNND 377
VGKSS++N L + V+P+ G T+ T ++ LID G+ V +
Sbjct: 379 VGKSSILNALVREDRTIVSPVSGTTRDAIDAEFTGPDGEKFRLIDTAGIRKKSSVASSGS 438
Query: 378 SETDIVLKGVVRVTNLADASEHIGEVLRRVKKEHLKRAYKIE 419
+ + + R +D + E + + ++ LK A +IE
Sbjct: 439 TTEAMSVNRAFRAIRRSDVVALVIEAMACITEQDLKIAERIE 480
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.316 0.132 0.383
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 11,542,528
Number of extensions: 494370
Number of successful extensions: 1694
Number of sequences better than 1.0e-05: 7
Number of HSP's gapped: 1688
Number of HSP's successfully gapped: 9
Length of query: 535
Length of database: 11,106,569
Length adjustment: 103
Effective length of query: 432
Effective length of database: 8,282,721
Effective search space: 3578135472
Effective search space used: 3578135472
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 114 (48.5 bits)