BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0351400 Os03g0351400|AK102370
(296 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G47900.3 | chr2:19611196-19612766 REVERSE LENGTH=408 406 e-114
AT5G18680.1 | chr5:6228358-6230426 REVERSE LENGTH=390 347 4e-96
AT3G06380.1 | chr3:1936384-1938028 FORWARD LENGTH=381 330 7e-91
AT1G25280.1 | chr1:8864961-8866608 FORWARD LENGTH=446 323 1e-88
AT1G76900.1 | chr1:28882741-28884377 FORWARD LENGTH=456 316 1e-86
AT1G43640.1 | chr1:16439619-16441253 REVERSE LENGTH=430 315 2e-86
AT1G47270.1 | chr1:17326828-17328564 FORWARD LENGTH=414 313 6e-86
AT2G18280.1 | chr2:7946754-7948176 FORWARD LENGTH=395 302 1e-82
AT1G53320.1 | chr1:19891237-19893429 REVERSE LENGTH=380 290 8e-79
AT1G61940.1 | chr1:22897399-22898575 REVERSE LENGTH=245 65 4e-11
AT1G16070.2 | chr1:5511899-5513779 REVERSE LENGTH=399 63 2e-10
>AT2G47900.3 | chr2:19611196-19612766 REVERSE LENGTH=408
Length = 407
Score = 406 bits (1043), Expect = e-114, Method: Compositional matrix adjust.
Identities = 207/293 (70%), Positives = 236/293 (80%), Gaps = 4/293 (1%)
Query: 8 QPGPRDGTLKCFIRRNRTTQTYYLYIGLTEALA--DDGKFLLAARKCRKPTCTDYLISLD 65
QPGPR ++C+I RNR+ QTYYLY+GL +A A DDGKFLLAA++ R+PTCTDY+ISL+
Sbjct: 115 QPGPRGSLVQCYIMRNRSNQTYYLYLGLNQAAASNDDGKFLLAAKRFRRPTCTDYIISLN 174
Query: 66 MSDMSKGSNTYIGKLRSNFLGTKFTVYDAHPPYDGXXXXXXXXXXXXGLNQVSPRVPAGN 125
D+S+GSNTYIGKLRSNFLGTKFTVYDA P G L QVSPR+P+GN
Sbjct: 175 CDDVSRGSNTYIGKLRSNFLGTKFTVYDAQPTNPGTQVTRTRSSRLLSLKQVSPRIPSGN 234
Query: 126 YPVSHISYELNVLGARGPRRMNCIMDSIPTSAVQEGGKAPTQTEFPLSGLDSFPSISFFR 185
YPV+HISYELNVLG+RGPRRM C+MD+IP SAV+ GG APTQTE S LDSFPS SFFR
Sbjct: 235 YPVAHISYELNVLGSRGPRRMQCVMDAIPASAVEPGGTAPTQTELVHSNLDSFPSFSFFR 294
Query: 186 SKSARIDSATSQLST--QKEEKLVLKNKSPRWHEQLQCWCLNFRGRVTVASVKNFQLVAS 243
SKS R +S S S+ QKE LVLKNK+PRWHEQLQCWCLNF GRVTVASVKNFQLVA+
Sbjct: 295 SKSIRAESLPSGPSSAAQKEGLLVLKNKAPRWHEQLQCWCLNFNGRVTVASVKNFQLVAA 354
Query: 244 DENGPTNQEQDKVILQFGKIGKDLFTMDYRYPISAFQSFAICLSSFDTKIACE 296
ENGP E + VILQFGK+GKD+FTMDY+YPISAFQ+F ICLSSFDTKIACE
Sbjct: 355 PENGPAGPEHENVILQFGKVGKDVFTMDYQYPISAFQAFTICLSSFDTKIACE 407
>AT5G18680.1 | chr5:6228358-6230426 REVERSE LENGTH=390
Length = 389
Score = 347 bits (890), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 174/296 (58%), Positives = 219/296 (73%), Gaps = 16/296 (5%)
Query: 8 QPGPRDGTLKCFIRRNRTTQTYYLYIGLTEALADDGKFLLAARKCRKPTCTDYLISLDMS 67
QPGPRD ++CFI+RNR TQ+Y+LY+GLT +L DDGKFLLAA K + TCTDY+ISL
Sbjct: 103 QPGPRDSLVQCFIKRNRITQSYHLYLGLTNSLTDDGKFLLAACKLKHTTCTDYIISLRSD 162
Query: 68 DMSKGSNTYIGKLRSNFLGTKFTVYDAH-PPYDGXXXXXXXXXXXXGLNQVSPRVPAGNY 126
DMS+ S Y+GK+RSNFLGTKFTV+D + P G +VS +VP G+Y
Sbjct: 163 DMSRRSQAYVGKVRSNFLGTKFTVFDGNLLPSTGAAKLRKSRSYNPA--KVSAKVPLGSY 220
Query: 127 PVSHISYELNVLGARGPRRMNCIMDSIPTSAVQEGGKAPTQTEFPLSGLDSFPSISFFRS 186
PV+HI+YELNVLG+RGPR+M C+MD+IPTS ++ G A +EFPL G S + RS
Sbjct: 221 PVAHITYELNVLGSRGPRKMQCLMDTIPTSTMEPQGVASEPSEFPLLGTRS----TLSRS 276
Query: 187 KSARIDSATSQLSTQKEEKLVLKNKSPRWHEQLQCWCLNFRGRVTVASVKNFQLVASDEN 246
+S + S++S L KE LVL NK+PRWHEQL+CWCLNF GRVTVASVKNFQLVA+ +
Sbjct: 277 QSKPLRSSSSHL---KETPLVLSNKTPRWHEQLRCWCLNFHGRVTVASVKNFQLVAAGAS 333
Query: 247 -----GPTNQEQ-DKVILQFGKIGKDLFTMDYRYPISAFQSFAICLSSFDTKIACE 296
G + + Q +++ILQFGK+GKD+FTMDY YPISAFQ+FAICLSSF+T+IACE
Sbjct: 334 CGSGTGMSPERQSERIILQFGKVGKDMFTMDYGYPISAFQAFAICLSSFETRIACE 389
>AT3G06380.1 | chr3:1936384-1938028 FORWARD LENGTH=381
Length = 380
Score = 330 bits (845), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 166/293 (56%), Positives = 206/293 (70%), Gaps = 13/293 (4%)
Query: 8 QPGPRDGTLKCFIRRNRTTQTYYLYIGLTEALADDGKFLLAARKCRKPTCTDYLISLDMS 67
Q GPRD ++CFI+RNR TQ+Y+LY+GLT +L D+GKFLLAA K ++ TCTDY+ISL
Sbjct: 97 QSGPRDSLVQCFIKRNRNTQSYHLYLGLTTSLTDNGKFLLAASKLKRATCTDYIISLRSD 156
Query: 68 DMSKGSNTYIGKLRSNFLGTKFTVYDAHPPYDGXXXXXXXXXXXXGLNQVSPRVPAGNYP 127
D+SK SN Y+G++RSNFLGTKFTV+D +VSPRVP G+YP
Sbjct: 157 DISKRSNAYLGRMRSNFLGTKFTVFDG----SQTGAAKMQKSRSSNFIKVSPRVPQGSYP 212
Query: 128 VSHISYELNVLGARGPRRMNCIMDSIPTSAVQEGGKAPTQTEFPLSGLDSFPSISFFRSK 187
++HISYELNVLG+RGPRRM CIMD+IP S V+ G + + S S FRS
Sbjct: 213 IAHISYELNVLGSRGPRRMRCIMDTIPMSIVESRGVVASTS----ISSFSSRSSPVFRSH 268
Query: 188 SARIDSATSQLSTQ----KEEKLVLKNKSPRWHEQLQCWCLNFRGRVTVASVKNFQLVAS 243
S + S ++ S + LVL NK+PRWHEQL+CWCLNF GRVTVASVKNFQLVA
Sbjct: 269 SKPLRSNSASCSDSGNNLGDPPLVLSNKAPRWHEQLRCWCLNFHGRVTVASVKNFQLVAV 328
Query: 244 DENGPTNQEQDKVILQFGKIGKDLFTMDYRYPISAFQSFAICLSSFDTKIACE 296
+ Q +++ILQFGK+GKD+FTMDY YPISAFQ+FAICLSSF+T+IACE
Sbjct: 329 SD-CEAGQTSERIILQFGKVGKDMFTMDYGYPISAFQAFAICLSSFETRIACE 380
>AT1G25280.1 | chr1:8864961-8866608 FORWARD LENGTH=446
Length = 445
Score = 323 bits (827), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 173/324 (53%), Positives = 225/324 (69%), Gaps = 35/324 (10%)
Query: 8 QPGPRDGTLKCFIRRNRTTQTYYLYIGLTEAL-ADDGKFLLAARKCRKPTCTDYLISLDM 66
QPGPRD ++CFI+R+++ T++L++ L+ AL ++GKFLL+A++ R+ T T+Y+IS+D
Sbjct: 122 QPGPRDAMIQCFIKRDKSKLTFHLFLCLSPALLVENGKFLLSAKRTRRTTRTEYIISMDA 181
Query: 67 SDMSKGSNTYIGKLRSNFLGTKFTVYDAHPPYDGXXXXXXXXXXXXGL---NQVSPRVPA 123
++S+ SN+Y+GKLRSNFLGTKF VYD PP + +VSP+VP+
Sbjct: 182 DNISRSSNSYLGKLRSNFLGTKFLVYDTQPPPNTSSSALITDRTSRSRFHSRRVSPKVPS 241
Query: 124 GNYPVSHISYELNVLGARGPRRMNCIMDSIPTSAVQEGGKAPTQTE----FPLSGLDSFP 179
G+Y ++ I+YELNVLG RGPRRM+CIM+SIP S+++ GG P Q E P S DSF
Sbjct: 242 GSYNIAQITYELNVLGTRGPRRMHCIMNSIPISSLEPGGSVPNQPEKLVPAPYSLDDSFR 301
Query: 180 S-ISFFRSK--SARIDSATSQLSTQ------KEEK-----LVLKNKSPRWHEQLQCWCLN 225
S ISF +S +D ++S+ S EE+ L+LKNK PRWHEQLQCWCLN
Sbjct: 302 SNISFSKSSFDHRSLDFSSSRFSEMGISCDDNEEEASFRPLILKNKQPRWHEQLQCWCLN 361
Query: 226 FRGRVTVASVKNFQLVASDENGPTN-------------QEQDKVILQFGKIGKDLFTMDY 272
FRGRVTVASVKNFQLVA+ + P EQDKVILQFGK+GKD+FTMDY
Sbjct: 362 FRGRVTVASVKNFQLVAARQPQPQGTGAAAAPTSAPAHPEQDKVILQFGKVGKDMFTMDY 421
Query: 273 RYPISAFQSFAICLSSFDTKIACE 296
RYP+SAFQ+FAICLSSFDTK+ACE
Sbjct: 422 RYPLSAFQAFAICLSSFDTKLACE 445
>AT1G76900.1 | chr1:28882741-28884377 FORWARD LENGTH=456
Length = 455
Score = 316 bits (809), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 170/340 (50%), Positives = 221/340 (65%), Gaps = 55/340 (16%)
Query: 8 QPGPRDGTLKCFIRRNRTTQTYYLYIGLTEAL-ADDGKFLLAARKCRKPTCTDYLISLDM 66
QPGPRD T++CFI+R+++ TY+LY+ L+ AL ++GKFLL+A++ R+ T T+Y+IS+
Sbjct: 120 QPGPRDATMQCFIKRDKSNLTYHLYLCLSPALLVENGKFLLSAKRIRRTTYTEYVISMHA 179
Query: 67 SDMSKGSNTYIGKLRSNFLGTKFTVYDAHPPYDGXXXXXXXXXXXXGLNQ------VSPR 120
+S+ SNTYIGK+RSNFLGTKF +YD P Y+ GL++ VSP+
Sbjct: 180 DTISRSSNTYIGKIRSNFLGTKFIIYDTQPAYNSNIARAVQPV---GLSRRFYSKRVSPK 236
Query: 121 VPAGNYPVSHISYELNVLGARGPRRMNCIMDSIPTSAVQEGGKAPTQTEF--PLSGLDSF 178
VP+G+Y ++ +SYELNVLG RGPRRM+C M+SIP S++ EGG P Q + P S LD
Sbjct: 237 VPSGSYKIAQVSYELNVLGTRGPRRMHCAMNSIPASSLAEGGTVPGQPDIIVPRSILDES 296
Query: 179 P---------SISFFRSK---SARIDSATSQLSTQKE-----------EKLVLKNKSPRW 215
I++ S SAR LS +E LVLKNK PRW
Sbjct: 297 FRSITSSSSRKITYDYSNDFSSARFSDILGPLSEDQEVVLEEGKERNSPPLVLKNKPPRW 356
Query: 216 HEQLQCWCLNFRGRVTVASVKNFQLVASD-------------------ENGPTNQEQDKV 256
HEQLQCWCLNFRGRVTVASVKNFQL+A++ +G T+ DK+
Sbjct: 357 HEQLQCWCLNFRGRVTVASVKNFQLIAANQPQPQPQPQPQPQPLTQPQPSGQTDGP-DKI 415
Query: 257 ILQFGKIGKDLFTMDYRYPISAFQSFAICLSSFDTKIACE 296
ILQFGK+GKD+FTMD+RYP+SAFQ+FAICLSSFDTK+ACE
Sbjct: 416 ILQFGKVGKDMFTMDFRYPLSAFQAFAICLSSFDTKLACE 455
>AT1G43640.1 | chr1:16439619-16441253 REVERSE LENGTH=430
Length = 429
Score = 315 bits (807), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 160/317 (50%), Positives = 216/317 (68%), Gaps = 33/317 (10%)
Query: 8 QPGPRDGTLKCFIRRNRTTQTYYLYIGLTEA-LADDGKFLLAARKCRKPTCTDYLISLDM 66
QPGPRDG ++C+I+R+++ TY+LY+ L+ A L + GKFLL+A++ R+ T T+Y+IS+D
Sbjct: 118 QPGPRDGIIQCYIKRDKSNMTYHLYLSLSPAILVESGKFLLSAKRSRRATYTEYVISMDA 177
Query: 67 SDMSKGSNTYIGKLRSNFLGTKFTVYDAHPPYDGXXXXXXXXXXXX-GLNQVSPRVPAGN 125
++S+ S+TYIGKL+SNFLGTKF VYD P Y+ +VSP+VP+G+
Sbjct: 178 DNISRSSSTYIGKLKSNFLGTKFIVYDTAPAYNSSQILSPPNRSRSFNSKKVSPKVPSGS 237
Query: 126 YPVSHISYELNVLGARGPRRMNCIMDSIPTSAVQEGGKAPTQTEFPLSGLD-SFPSISFF 184
Y ++ ++YELN+LG RGPRRMNCIM SIP+ A++ GG P+Q EF LD SF SI
Sbjct: 238 YNIAQVTYELNLLGTRGPRRMNCIMHSIPSLALEPGGTVPSQPEFLQRSLDESFRSIG-- 295
Query: 185 RSKSARIDSATSQLSTQKEEK-----LVLKNKSPRWHEQLQCWCLNFRGRVTVASVKNFQ 239
S++I + + + KEE+ LVLK K PRW + L+CWCLNF+GRVTVASVKNFQ
Sbjct: 296 ---SSKIVNHSGDFTRPKEEEGKVRPLVLKTKPPRWLQPLRCWCLNFKGRVTVASVKNFQ 352
Query: 240 LVA-------SDENG-------------PTNQEQDKVILQFGKIGKDLFTMDYRYPISAF 279
L++ S +G P DK+IL FGK+GKD+FTMDYRYP+SAF
Sbjct: 353 LMSAATVQPGSGSDGGALATRPSLSPQQPEQSNHDKIILHFGKVGKDMFTMDYRYPLSAF 412
Query: 280 QSFAICLSSFDTKIACE 296
Q+FAI LS+FDTK+ACE
Sbjct: 413 QAFAISLSTFDTKLACE 429
>AT1G47270.1 | chr1:17326828-17328564 FORWARD LENGTH=414
Length = 413
Score = 313 bits (803), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 169/304 (55%), Positives = 205/304 (67%), Gaps = 29/304 (9%)
Query: 3 SLRDVQPGPRDGTLKCFIRRNRTTQTYYLYIGLTEALA-DDGKFLLAARKCRKPTCTDYL 61
SLR QPGPRD ++CFI+R R T Y LY+GL+ AL+ D K LL+A++ R+ T +++
Sbjct: 129 SLR--QPGPRDAPIQCFIKRERATGIYRLYLGLSPALSGDKSKLLLSAKRVRRATGAEFV 186
Query: 62 ISLDMSDMSKGSNTYIGKLRSNFLGTKFTVYDAHPPYDGXXXXXXXXXXXXGLNQVSPRV 121
+SL +D S+ S+ YIGKLRSNFLGTKFTVY+ PP QVSP V
Sbjct: 187 VSLSGNDFSRSSSNYIGKLRSNFLGTKFTVYENQPPPFNRKLPPSM--------QVSPWV 238
Query: 122 PAGN--YPVSHISYELNVLGARGPRRMNCIMDSIPTSAVQEGGKAPTQTEFPLSGLDSFP 179
+ + Y ++ I YELNVL RGPRRM CIM SIP SA+QEGGK + TEF G
Sbjct: 239 SSSSSSYNIASILYELNVLRTRGPRRMQCIMHSIPISAIQEGGKIQSPTEFTNQGK---- 294
Query: 180 SISFFRSKSARIDSATSQLSTQK--EEKLVLKNKSPRWHEQLQCWCLNFRGRVTVASVKN 237
+ K +D + L + +E L+LKNKSPRWHEQLQCWCLNF+GRVTVASVKN
Sbjct: 295 -----KKKKPLMDFCSGNLGGESVIKEPLILKNKSPRWHEQLQCWCLNFKGRVTVASVKN 349
Query: 238 FQLVASDENGPTN-----QEQDKVILQFGKIGKDLFTMDYRYPISAFQSFAICLSSFDTK 292
FQLVA+ N +EQD+VILQFGKIGKD+FTMDYRYPISAFQ+FAICLSSFDTK
Sbjct: 350 FQLVAAAAEAGKNMNIPEEEQDRVILQFGKIGKDIFTMDYRYPISAFQAFAICLSSFDTK 409
Query: 293 IACE 296
CE
Sbjct: 410 PVCE 413
>AT2G18280.1 | chr2:7946754-7948176 FORWARD LENGTH=395
Length = 394
Score = 302 bits (773), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 155/292 (53%), Positives = 195/292 (66%), Gaps = 12/292 (4%)
Query: 8 QPGPRDGTLKCFIRRNRTTQTYYLYIGLTEALADDGKFLLAARKCRKPTCTDYLISLDMS 67
QPGPRD ++CFI+RNR T TY LY GL + ++ K LLAAR+ R+ TCTD++ISL
Sbjct: 111 QPGPRDSPIQCFIKRNRATATYILYYGLMPSETENDKLLLAARRIRRATCTDFIISLSAK 170
Query: 68 DMSKGSNTYIGKLRSNFLGTKFTVYDAHPPYDGXXXXXXXXXXXXGLNQVSPRVPAGNYP 127
+ S+ S+TY+GKLRS FLGTKFT+YD Q +P++P +
Sbjct: 171 NFSRSSSTYVGKLRSGFLGTKFTIYDNQ---TASSTAQAQPNRRLHPKQAAPKLPTNSST 227
Query: 128 VSHISYELNVLGARGPRRMNCIMDSIPTSAVQEGGKAPTQTEFPLSGLDSFPSISFFRSK 187
V +I+YELNVL RGPRRM+C MDSIP S+V E +S S + K
Sbjct: 228 VGNITYELNVLRTRGPRRMHCAMDSIPLSSVIAEPSVVQGIEEEVSSSPSPKGETITTDK 287
Query: 188 SARIDSATSQLSTQKEEKLVLKNKSPRWHEQLQCWCLNFRGRVTVASVKNFQLVASDE-- 245
+S + +++ LVLKNKSPRWHEQLQCWCLNF+GRVTVASVKNFQLVA +
Sbjct: 288 EIPDNSP-----SLRDQPLVLKNKSPRWHEQLQCWCLNFKGRVTVASVKNFQLVAEIDAS 342
Query: 246 -NGPTNQEQDKVILQFGKIGKDLFTMDYRYPISAFQSFAICLSSFDTKIACE 296
+ P +E ++VILQFGKIGKD+FTMDYRYP+SAFQ+FAIC+SSFDTK ACE
Sbjct: 343 LDAPP-EEHERVILQFGKIGKDIFTMDYRYPLSAFQAFAICISSFDTKPACE 393
>AT1G53320.1 | chr1:19891237-19893429 REVERSE LENGTH=380
Length = 379
Score = 290 bits (741), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 145/290 (50%), Positives = 189/290 (65%), Gaps = 20/290 (6%)
Query: 9 PGPRDGTLKCFIRRNRTTQTYYLYIGLTEALADDGKFLLAARKCRKPTCTDYLISLDMSD 68
PGPRD + +C I+RN+ T T+YLY+ LT + D GKFLLAAR+ R T+Y+ISLD D
Sbjct: 108 PGPRDFSNQCLIKRNKKTSTFYLYLALTPSFTDKGKFLLAARRFRTGAYTEYIISLDADD 167
Query: 69 MSKGSNTYIGKLRSNFLGTKFTVYDAHPPYDGXXXXXXXXXXXXGLNQVSPRVPAGNYPV 128
S+GSN Y+GKLRS+FLGT FTVYD+ PP++G Q+SP+VPAGN+ V
Sbjct: 168 FSQGSNAYVGKLRSDFLGTNFTVYDSQPPHNGAKPSNGKASRRFASKQISPQVPAGNFEV 227
Query: 129 SHISYELNVLGARGPRRMNCIMDSIPTSAVQEGGKAPTQTEFPLSGLDSFPSISFFRSKS 188
H+SY+ N+L +RGPRRM + S +GL S K
Sbjct: 228 GHVSYKFNLLKSRGPRRMVSTLRCPSPSPSSS-----------SAGLSS-------DQKP 269
Query: 189 ARIDSATSQLSTQKEEKLVLKNKSPRWHEQLQCWCLNFRGRVTVASVKNFQLVAS-DENG 247
+ + + +LKNK+PRWHE LQCWCLNF GRVTVASVKNFQLVA+ D++
Sbjct: 270 CDVTKIMKKPNKDGSSLTILKNKAPRWHEHLQCWCLNFHGRVTVASVKNFQLVATVDQSQ 329
Query: 248 PTNQ-EQDKVILQFGKIGKDLFTMDYRYPISAFQSFAICLSSFDTKIACE 296
P+ + +++ V+LQFGK+G D FTMDYR P+SAFQ+FAICL+SF TK+ACE
Sbjct: 330 PSGKGDEETVLLQFGKVGDDTFTMDYRQPLSAFQAFAICLTSFGTKLACE 379
>AT1G61940.1 | chr1:22897399-22898575 REVERSE LENGTH=245
Length = 244
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/102 (46%), Positives = 57/102 (55%), Gaps = 22/102 (21%)
Query: 144 RRMNCIMDSIPTSAVQEGGKAPTQTEFPLSGLDSFPSISFFRSKSARIDSATSQLSTQKE 203
R +C+MD+I SAV+ GG A TQTE LD+F S FRS S QKE
Sbjct: 102 RETHCVMDAISASAVKPGGTATTQTE-----LDNFVS---FRSPSG-----------QKE 142
Query: 204 EKLVLKNKSPRWHEQLQCWCLNFRG-RVTVASVKNFQLVASD 244
LVLK+K PR E Q WCL+F G R V+S K FQL ++
Sbjct: 143 GVLVLKSKVPRLEE--QSWCLDFNGWRDIVSSGKKFQLYEAE 182
>AT1G16070.2 | chr1:5511899-5513779 REVERSE LENGTH=399
Length = 398
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 52/91 (57%), Gaps = 17/91 (18%)
Query: 210 NKSPRWHEQLQCWCLNFR--GRVTV---ASVKNFQLVASDENGPTNQEQDKVILQFGKIG 264
NK + HE L+FR GR + +SVKNFQL + E + ILQ G++
Sbjct: 318 NKISKQHE------LDFRDRGRTGLRIQSSVKNFQLTLTQET------PRQTILQMGRVD 365
Query: 265 KDLFTMDYRYPISAFQSFAICLSSFDTKIAC 295
K + +D+RYP S +Q+F ICL+S D+K+ C
Sbjct: 366 KARYVIDFRYPFSGYQAFCICLASIDSKLCC 396
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.319 0.135 0.405
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 6,288,564
Number of extensions: 246349
Number of successful extensions: 559
Number of sequences better than 1.0e-05: 11
Number of HSP's gapped: 528
Number of HSP's successfully gapped: 11
Length of query: 296
Length of database: 11,106,569
Length adjustment: 98
Effective length of query: 198
Effective length of database: 8,419,801
Effective search space: 1667120598
Effective search space used: 1667120598
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 111 (47.4 bits)