BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0344100 Os03g0344100|AK065547
(264 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G02840.1 | chr1:626918-629583 FORWARD LENGTH=304 271 2e-73
AT1G09140.1 | chr1:2942887-2945818 REVERSE LENGTH=269 266 1e-71
AT3G49430.1 | chr3:18332668-18334829 FORWARD LENGTH=301 263 5e-71
AT4G02430.2 | chr4:1069186-1071313 FORWARD LENGTH=279 252 1e-67
AT3G53500.2 | chr3:19834557-19836507 REVERSE LENGTH=285 67 7e-12
AT2G37340.1 | chr2:15670372-15672331 REVERSE LENGTH=291 65 4e-11
AT3G61860.1 | chr3:22900311-22902159 REVERSE LENGTH=265 65 5e-11
AT4G31580.1 | chr4:15306983-15308064 FORWARD LENGTH=201 59 3e-09
AT4G25500.1 | chr4:13025168-13027243 FORWARD LENGTH=351 57 9e-09
AT2G24590.1 | chr2:10449837-10450860 FORWARD LENGTH=197 56 2e-08
AT4G12640.1 | chr4:7462697-7467630 FORWARD LENGTH=824 56 2e-08
AT2G46610.1 | chr2:19136769-19138492 REVERSE LENGTH=251 56 2e-08
AT5G52040.2 | chr5:21131081-21133318 FORWARD LENGTH=358 55 5e-08
AT1G23860.1 | chr1:8428091-8429164 REVERSE LENGTH=188 53 2e-07
AT5G50250.1 | chr5:20452677-20453965 REVERSE LENGTH=290 50 1e-06
AT4G24770.1 | chr4:12766223-12767952 REVERSE LENGTH=330 50 2e-06
AT5G12190.1 | chr5:3940731-3941105 REVERSE LENGTH=125 48 5e-06
>AT1G02840.1 | chr1:626918-629583 FORWARD LENGTH=304
Length = 303
Score = 271 bits (693), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 135/198 (68%), Positives = 155/198 (78%), Gaps = 8/198 (4%)
Query: 1 MSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDAEE 60
MS R SRT+YVGNLPGDIREREVEDLF KYG +V IDLK+PPRPPGYAFVEF+D RDAE+
Sbjct: 1 MSSRSSRTVYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAED 60
Query: 61 ACAGRDGYNFDGHRLRVEPAHGGRGNGGSSFDRPSNFXXXXXXXV--------SRHSEYR 112
A GRDGY+FDGHRLRVE AHGGR + + + SR SE+R
Sbjct: 61 AIHGRDGYDFDGHRLRVELAHGGRRSSDDTRGSFNGGGRGGGRGRGDGGSRGPSRRSEFR 120
Query: 113 VLVTGLPSSASWQDLKDHMRKAGDVCFSEVYREGGGTVGIVDYTNYDDMKYAIKKLDDSE 172
VLVTGLPSSASWQDLKDHMRK GDVCFS+VYR+ GT G+VDYT Y+DMKYA+KKLDD+E
Sbjct: 121 VLVTGLPSSASWQDLKDHMRKGGDVCFSQVYRDARGTTGVVDYTCYEDMKYALKKLDDTE 180
Query: 173 FRNAFSKGHIRVKEYDGK 190
FRNAFS G++RV+EYD +
Sbjct: 181 FRNAFSNGYVRVREYDSR 198
>AT1G09140.1 | chr1:2942887-2945818 REVERSE LENGTH=269
Length = 268
Score = 266 bits (679), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 138/190 (72%), Positives = 155/190 (81%), Gaps = 2/190 (1%)
Query: 1 MSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDAEE 60
MS RW+RTIYVGNLPGDIR+ EVEDLFYKYG IVDIDLKIPPRPPGYAFVEFEDPRDA++
Sbjct: 1 MSSRWNRTIYVGNLPGDIRKCEVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDPRDADD 60
Query: 61 ACAGRDGYNFDGHRLRVEPAHGGRGNGGSSFDRPSNFXXXXXXXVSRHSEYRVLVTGLPS 120
A GRDGY+FDG RLRVE AHGGR S DR + SR S+YRVLVTGLP
Sbjct: 61 AIYGRDGYDFDGCRLRVEIAHGGR-RFSPSVDR-YSSSYSASRAPSRRSDYRVLVTGLPP 118
Query: 121 SASWQDLKDHMRKAGDVCFSEVYREGGGTVGIVDYTNYDDMKYAIKKLDDSEFRNAFSKG 180
SASWQDLKDHMRKAGDVCFSEV+ + G G+VDY+NYDDMKYAI+KLD +EFRNAFS
Sbjct: 119 SASWQDLKDHMRKAGDVCFSEVFPDRKGMSGVVDYSNYDDMKYAIRKLDATEFRNAFSSA 178
Query: 181 HIRVKEYDGK 190
+IRV+EY+ +
Sbjct: 179 YIRVREYESR 188
>AT3G49430.1 | chr3:18332668-18334829 FORWARD LENGTH=301
Length = 300
Score = 263 bits (673), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 136/201 (67%), Positives = 155/201 (77%), Gaps = 15/201 (7%)
Query: 1 MSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDAEE 60
MS R+SR+IYVGNLPGDIRE E+ED+FYKYGRIVDI+LK+PPRPP Y FVEFE RDAE+
Sbjct: 1 MSGRFSRSIYVGNLPGDIREHEIEDIFYKYGRIVDIELKVPPRPPCYCFVEFEHSRDAED 60
Query: 61 ACAGRDGYNFDGHRLRVEPAHGGRGNGGSSFDR-------------PSNFXXXXXXXVSR 107
A GRDGYN DG RLRVE AHGGRG SS DR VSR
Sbjct: 61 AIKGRDGYNLDGCRLRVELAHGGRGQ--SSSDRRGGYGGGGSGYGGGGGGGGSARFGVSR 118
Query: 108 HSEYRVLVTGLPSSASWQDLKDHMRKAGDVCFSEVYREGGGTVGIVDYTNYDDMKYAIKK 167
HSE+RV+V GLPSSASWQDLKDHMRKAGDVCF+EV R+ GT G+VDYTNYDDMKYAI+K
Sbjct: 119 HSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVTRDSDGTYGVVDYTNYDDMKYAIRK 178
Query: 168 LDDSEFRNAFSKGHIRVKEYD 188
LDD+EFRN +++G IRVK+Y+
Sbjct: 179 LDDTEFRNPWARGFIRVKKYE 199
>AT4G02430.2 | chr4:1069186-1071313 FORWARD LENGTH=279
Length = 278
Score = 252 bits (644), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 133/197 (67%), Positives = 151/197 (76%), Gaps = 12/197 (6%)
Query: 1 MSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDAEE 60
MS R SRTIYVGNLPGDIREREVEDLF KYG +V IDLKIPPRPPGYAFVEFED RDA++
Sbjct: 1 MSSRSSRTIYVGNLPGDIREREVEDLFSKYGPVVQIDLKIPPRPPGYAFVEFEDARDADD 60
Query: 61 ACAGRDGYNFDGHRLRVEPAHGGRGNGGSSFDRPSNFXXXXXXXV---------SRHSEY 111
A GRDGY+FDGH LRVE AHGGR + + S SR SEY
Sbjct: 61 AIYGRDGYDFDGHHLRVELAHGGRRSSHDARGSYSGRGRGGRGGGDGGGRERGPSRRSEY 120
Query: 112 RVLVTGLPSSASWQDLKDHMRKAGDVCFSEVYREGGGTVGIVDYTNYDDMKYAIKKLDDS 171
RV+V+GLPSSASWQDLKDHMRK G+VCFS+V+R+G GT GIVDYT+Y+DMKYA LDD+
Sbjct: 121 RVVVSGLPSSASWQDLKDHMRKGGEVCFSQVFRDGRGTTGIVDYTSYEDMKYA---LDDT 177
Query: 172 EFRNAFSKGHIRVKEYD 188
EFRNAFS ++RV+EYD
Sbjct: 178 EFRNAFSHEYVRVREYD 194
>AT3G53500.2 | chr3:19834557-19836507 REVERSE LENGTH=285
Length = 284
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 48/74 (64%), Gaps = 5/74 (6%)
Query: 9 IYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDAEEACAGRDGY 68
+YVG L R R++E LF +YGR+ D+D+K YAFVEF DPRDA++A DG
Sbjct: 13 LYVGRLSSRTRTRDLERLFSRYGRVRDVDMKR-----DYAFVEFSDPRDADDARYYLDGR 67
Query: 69 NFDGHRLRVEPAHG 82
+FDG R+ VE + G
Sbjct: 68 DFDGSRITVEASRG 81
>AT2G37340.1 | chr2:15670372-15672331 REVERSE LENGTH=291
Length = 290
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 48/74 (64%), Gaps = 5/74 (6%)
Query: 9 IYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDAEEACAGRDGY 68
+YVG L R R++E LF +YGR+ D+D+K YAFVEF DPRDA++A DG
Sbjct: 13 LYVGRLSSRTRTRDLERLFSRYGRVRDVDMKR-----DYAFVEFGDPRDADDARHYLDGR 67
Query: 69 NFDGHRLRVEPAHG 82
+FDG R+ VE + G
Sbjct: 68 DFDGSRITVEFSRG 81
>AT3G61860.1 | chr3:22900311-22902159 REVERSE LENGTH=265
Length = 264
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 72/169 (42%), Gaps = 20/169 (11%)
Query: 7 RTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDAEEACAGRD 66
R ++VGN + R+ ++E LF KYGR+ +D+K GYAFV FED RDAE+A D
Sbjct: 2 RPVFVGNFEYETRQSDLERLFDKYGRVDRVDMKS-----GYAFVYFEDERDAEDAIRKLD 56
Query: 67 GYNF--DGHRLRVEPAHGGRGNGGSSFDRPSNFXXXXXXXVSRHSEYRVLVTGLPSSASW 124
+ F + RL VE A G RG PSN V + P
Sbjct: 57 NFPFGYEKRRLSVEWAKGERGRPRGDAKAPSNLKPTKTLFV---------INFDPIRTKE 107
Query: 125 QDLKDHMRKAGDVCFSEVYREGGGTVGIVDYTNYDDMKYAIKKLDDSEF 173
D++ H G V + R V + +D A++ S+
Sbjct: 108 HDIEKHFEPYGKVTNVRIRR----NFSFVQFETQEDATKALEATQRSKI 152
>AT4G31580.1 | chr4:15306983-15308064 FORWARD LENGTH=201
Length = 200
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 45/73 (61%), Gaps = 6/73 (8%)
Query: 9 IYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDAEEACAGRDGY 68
+YVGNL + ERE+ED F +G + + + RPPGYAF++FEDPRDA +A DG
Sbjct: 4 VYVGNLDPRVTERELEDEFRAFGVVRSV--WVARRPPGYAFLDFEDPRDARDAIRALDGK 61
Query: 69 NFDGHRLRVEPAH 81
N RVE +H
Sbjct: 62 NG----WRVEQSH 70
>AT4G25500.1 | chr4:13025168-13027243 FORWARD LENGTH=351
Length = 350
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 80/186 (43%), Gaps = 16/186 (8%)
Query: 7 RTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDAEEACAGRD 66
+ ++ GN D RE ++E LF KYG++ +D+K G+AFV ED RDAE+A D
Sbjct: 2 KPVFCGNFEYDAREGDLERLFRKYGKVERVDMKA-----GFAFVYMEDERDAEDAIRALD 56
Query: 67 GYNF--DGHRLRVEPAHGGRGNGGSSFDRPSNFXXXXXXXVSRHSEYRVLVTGLPSSASW 124
+ F G RLRVE RG D+ S R S+ ++ +
Sbjct: 57 RFEFGRKGRRLRVEWTKSERGG-----DKRSGGGSRRSSSSMRPSKTLFVINFDADNTRT 111
Query: 125 QDLKDHMRKAGDVCFSEVYREGGGTVGIVDYTNYDDMKYAIKKLDDSEFRNAFSKGHIRV 184
+DL+ H G + + R + Y +D A+ ++S+ + V
Sbjct: 112 RDLEKHFEPYGKIVNVRIRR----NFAFIQYEAQEDATRALDASNNSKLMDKVISVEYAV 167
Query: 185 KEYDGK 190
K+ D +
Sbjct: 168 KDDDAR 173
>AT2G24590.1 | chr2:10449837-10450860 FORWARD LENGTH=197
Length = 196
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 44/73 (60%), Gaps = 6/73 (8%)
Query: 9 IYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDAEEACAGRDGY 68
+YVGNL + ERE+ED F +G I + + RPPGYAF++FED RDA +A DG
Sbjct: 4 VYVGNLDPRVTERELEDEFRSFGVIRSV--WVARRPPGYAFLDFEDSRDARDAIREVDGK 61
Query: 69 NFDGHRLRVEPAH 81
N RVE +H
Sbjct: 62 NG----WRVEQSH 70
>AT4G12640.1 | chr4:7462697-7467630 FORWARD LENGTH=824
Length = 823
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 74/176 (42%), Gaps = 27/176 (15%)
Query: 6 SRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPG--YAFVEFEDPRDAEEACA 63
SR ++VGNLP I ERE+ D F ++G + + + PG YAFV F DA A
Sbjct: 22 SRHLWVGNLPHGILERELADRFLRFGELESLAFQ-----PGRSYAFVNFNHDEDAFAAIE 76
Query: 64 GRDGYNFDGHRLRVEPAHGGRGNGGSSFDRPSNFXXXXXXXVSRHSEYRVLVTGLPSSAS 123
G+ G+ LR+E A + + GS D + RH E R G +S
Sbjct: 77 SLQGFPLSGNPLRIEFAKAEKSSTGSRTD-----------DIYRHDEQRSAARG----SS 121
Query: 124 WQDLKDHMR-KAGDVCFSEVYREGGGTVGIVDYTNYDDMKYAIKKLDDSEFRNAFS 178
+ MR ++ D + V Y + A K+DD+ RN FS
Sbjct: 122 FVQRDSRMRYESPDTYSKSKMNDRNAEPSEVLYIGFP----ASLKVDDALLRNVFS 173
>AT2G46610.1 | chr2:19136769-19138492 REVERSE LENGTH=251
Length = 250
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 71/169 (42%), Gaps = 18/169 (10%)
Query: 7 RTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDAEEACAGRD 66
R +YVGN D R ++E LF K+GR+ +D+K GYAFV FED RDAE+A D
Sbjct: 2 RHVYVGNFDYDTRHSDLERLFSKFGRVKRVDMK-----SGYAFVYFEDERDAEDAIRRTD 56
Query: 67 GYNF--DGHRLRVEPAHGGRGNGGSSFDRPSNFXXXXXXXVSRHSEYRVLVTGLPSSASW 124
F +L VE A +G G D R ++ ++ P
Sbjct: 57 NTTFGYGRRKLSVEWAKDFQGERGKPRD-------GKAVSNQRPTKTLFVINFDPIRTRE 109
Query: 125 QDLKDHMRKAGDVCFSEVYREGGGTVGIVDYTNYDDMKYAIKKLDDSEF 173
+D++ H G V + R V + +D A+ +S+
Sbjct: 110 RDMERHFEPYGKVLNVRMRR----NFAFVQFATQEDATKALDSTHNSKL 154
>AT5G52040.2 | chr5:21131081-21133318 FORWARD LENGTH=358
Length = 357
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 44/74 (59%), Gaps = 7/74 (9%)
Query: 7 RTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDAEEACAGRD 66
+ ++ GN D RE ++E LF KYG++ +D+K G+AFV ED RDAE+A D
Sbjct: 2 KPVFCGNFEYDARESDLERLFRKYGKVERVDMKA-----GFAFVYMEDERDAEDAIRALD 56
Query: 67 GYNF--DGHRLRVE 78
+ + G RLRVE
Sbjct: 57 RFEYGRTGRRLRVE 70
>AT1G23860.1 | chr1:8428091-8429164 REVERSE LENGTH=188
Length = 187
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 45/73 (61%), Gaps = 6/73 (8%)
Query: 9 IYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDAEEACAGRDGY 68
+YVGNL + ERE+ED F +G + ++ + RPPGYAF+EF+D RDA +A + D
Sbjct: 4 VYVGNLDPRVTERELEDEFKAFGVLRNV--WVARRPPGYAFLEFDDERDALDAISALDRK 61
Query: 69 NFDGHRLRVEPAH 81
N RVE +H
Sbjct: 62 NG----WRVELSH 70
>AT5G50250.1 | chr5:20452677-20453965 REVERSE LENGTH=290
Length = 289
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 3/76 (3%)
Query: 9 IYVGNLPGDIREREVEDLFYKYGRIVD---IDLKIPPRPPGYAFVEFEDPRDAEEACAGR 65
IYVGNLP D+ +E LF ++G++VD + + R G+ FV+ + + A A
Sbjct: 209 IYVGNLPWDVDSGRLERLFSEHGKVVDARVVSDRETGRSRGFGFVQMSNENEVNVAIAAL 268
Query: 66 DGYNFDGHRLRVEPAH 81
DG N +G ++V A
Sbjct: 269 DGQNLEGRAIKVNVAE 284
>AT4G24770.1 | chr4:12766223-12767952 REVERSE LENGTH=330
Length = 329
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 3/76 (3%)
Query: 9 IYVGNLPGDIREREVEDLFYKYGRIVDIDL---KIPPRPPGYAFVEFEDPRDAEEACAGR 65
+YVGNLP D+ +E LF ++G++V+ + + R G+ FV D + EA +
Sbjct: 246 VYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAISAL 305
Query: 66 DGYNFDGHRLRVEPAH 81
DG N +G +RV A
Sbjct: 306 DGQNLEGRAIRVNVAE 321
>AT5G12190.1 | chr5:3940731-3941105 REVERSE LENGTH=125
Length = 124
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 37/72 (51%)
Query: 6 SRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDAEEACAGR 65
+R +YV NLP +I E+ D+F KYG I I + G AFV +ED DA+ A
Sbjct: 18 NRVLYVRNLPFNITSEEMYDIFGKYGAIRQIRIGCDKATKGTAFVVYEDIYDAKNAVDHL 77
Query: 66 DGYNFDGHRLRV 77
G+N L V
Sbjct: 78 SGFNVANRYLIV 89
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.320 0.143 0.447
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 5,390,149
Number of extensions: 232305
Number of successful extensions: 845
Number of sequences better than 1.0e-05: 22
Number of HSP's gapped: 895
Number of HSP's successfully gapped: 22
Length of query: 264
Length of database: 11,106,569
Length adjustment: 97
Effective length of query: 167
Effective length of database: 8,447,217
Effective search space: 1410685239
Effective search space used: 1410685239
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 111 (47.4 bits)