BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0336600 Os03g0336600|AK061202
(231 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G10915.5 | chr3:3416101-3417497 REVERSE LENGTH=250 196 9e-51
AT4G11220.1 | chr4:6838176-6839578 REVERSE LENGTH=272 120 4e-28
AT3G18260.1 | chr3:6260328-6261504 REVERSE LENGTH=226 117 4e-27
AT4G23630.1 | chr4:12318070-12319574 FORWARD LENGTH=276 114 3e-26
AT2G15280.1 | chr2:6640191-6641414 FORWARD LENGTH=202 112 2e-25
AT3G10260.3 | chr3:3171413-3172568 REVERSE LENGTH=268 110 7e-25
AT1G64090.2 | chr1:23789395-23790669 FORWARD LENGTH=272 108 2e-24
AT5G41600.1 | chr5:16636230-16637472 FORWARD LENGTH=258 107 5e-24
AT2G46170.1 | chr2:18965410-18966940 FORWARD LENGTH=256 103 6e-23
AT3G54120.1 | chr3:20041269-20042133 REVERSE LENGTH=204 93 1e-19
AT3G19460.2 | chr3:6747913-6748904 FORWARD LENGTH=219 81 6e-16
AT4G01230.1 | chr4:516264-517408 REVERSE LENGTH=243 77 6e-15
AT3G61560.2 | chr3:22777918-22779171 FORWARD LENGTH=265 70 1e-12
AT1G68230.2 | chr1:25572185-25572921 FORWARD LENGTH=163 53 2e-07
AT2G23640.1 | chr2:10057554-10059042 FORWARD LENGTH=207 51 5e-07
>AT3G10915.5 | chr3:3416101-3417497 REVERSE LENGTH=250
Length = 249
Score = 196 bits (498), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 103/220 (46%), Positives = 143/220 (65%), Gaps = 23/220 (10%)
Query: 34 RLSVHRIAGGGK----------------------AADIILWKRGRVTIGVIFGATMAWWL 71
+++VH+ GGGK AAD++LW+R +++GVI +T+AW +
Sbjct: 29 QITVHQFMGGGKGEFFFPEFHFGYSRKWKTWQFIAADLLLWRRRHLSLGVIIISTVAWLI 88
Query: 72 FEKSGLSFLTVCSDVLLILIVVQFIRIKVAGLLNKQPRPLPELVLSEEMVSNAAASFRVK 131
FE SGL FL+V SDVLLI+I++ F+ +V+ N+Q LPELVLSEEMV++AAASFR+K
Sbjct: 89 FEFSGLPFLSVSSDVLLIVIMISFVHARVSAFRNRQLHSLPELVLSEEMVNSAAASFRIK 148
Query: 132 VNNMLMIAHDITLGKDXXXXXXXXXXXX-XXXXIGNFCSSITLAYFGTIALVTIPALYSK 190
+N++L++AHD+T+G D IG++ S TL Y GTI VTIPALYSK
Sbjct: 149 LNHLLVMAHDVTVGNDFRLFFKQVVICLWLLSAIGSYISLCTLLYIGTILSVTIPALYSK 208
Query: 191 NQEQVDRYAGMVHRNISRHYKIVDENVMSRLPRSFIRDKE 230
Q +VD+ G +HR +S HYKIVDENV+SRL S +DK+
Sbjct: 209 YQSKVDKCCGTIHRRLSHHYKIVDENVISRLSWSLSKDKD 248
>AT4G11220.1 | chr4:6838176-6839578 REVERSE LENGTH=272
Length = 271
Score = 120 bits (302), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 102/194 (52%)
Query: 37 VHRIAGGGKAADIILWKRGRVTIGVIFGATMAWWLFEKSGLSFLTVCSDVLLILIVVQFI 96
VH++ GGGK ADI +WK +++ GV GAT+AW LFE LT+ V+++ + V F+
Sbjct: 76 VHKVLGGGKPADIFMWKDKKMSGGVFGGATVAWVLFELMEYHLLTLLCHVMIVALAVLFL 135
Query: 97 RIKVAGLLNKQPRPLPELVLSEEMVSNAAASFRVKVNNMLMIAHDITLGKDXXXXXXXXX 156
++K P +PE+ + EE + A+ R+++N + +I G+D
Sbjct: 136 WSNATMFIHKSPPKIPEVHIPEEPLLQLASGLRIEINRGISSLREIASGRDIKKFLSAIA 195
Query: 157 XXXXXXXIGNFCSSITLAYFGTIALVTIPALYSKNQEQVDRYAGMVHRNISRHYKIVDEN 216
+G S +TLAY + L T+P Y K +++VD Y + + Y ++D
Sbjct: 196 GLWVLSILGGCYSFLTLAYIALVLLFTVPLFYDKYEDKVDSYGEKAMAELKKQYAVLDAK 255
Query: 217 VMSRLPRSFIRDKE 230
V S++PR ++DK+
Sbjct: 256 VFSKIPRGPLKDKK 269
>AT3G18260.1 | chr3:6260328-6261504 REVERSE LENGTH=226
Length = 225
Score = 117 bits (294), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 112/216 (51%), Gaps = 7/216 (3%)
Query: 21 SSAADPSTSGTASRL-----SVHRIAGGGKAADIILWKRGRVTIGVIFGATMAWWLFEKS 75
S + D T ++L S+H I GGGK ADI+LW+ ++ ++ G ++ W+L E
Sbjct: 9 SDSEDERTIHKTTKLFTRQRSIHSIFGGGKVADILLWREPKIAATLVIGVSILWFLMEVV 68
Query: 76 GLSFLTVCSDVLLILIVVQFIRIKVAGLLNKQPRPL-PELVLSEEMVSNAAASFRVKVNN 134
+F+T+ + ++ FI + LN + RPL PE+VL E A SF V+ N
Sbjct: 69 EYNFITLICHASMTSMLFFFIWSTASDFLNWE-RPLIPEVVLDESSFKQLARSFHVRFNQ 127
Query: 135 MLMIAHDITLGKDXXXXXXXXXXXXXXXXIGNFCSSITLAYFGTIALVTIPALYSKNQEQ 194
+L D+ G+D IG + + + L + G +++ T+P +Y ++
Sbjct: 128 ILTKLLDVACGRDPPLFFLTTISLYIVSIIGTYFNFVNLLFIGFVSMQTLPVMYEMYEDD 187
Query: 195 VDRYAGMVHRNISRHYKIVDENVMSRLPRSFIRDKE 230
VD AG + R + + YK VD NV+S++PR +++K+
Sbjct: 188 VDTAAGKLMRKMKKLYKKVDTNVLSKIPRGTVKNKK 223
>AT4G23630.1 | chr4:12318070-12319574 FORWARD LENGTH=276
Length = 275
Score = 114 bits (286), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 102/194 (52%)
Query: 37 VHRIAGGGKAADIILWKRGRVTIGVIFGATMAWWLFEKSGLSFLTVCSDVLLILIVVQFI 96
VH++ GGGK ADI +WK +++ GV+ GAT AW +FE LT+ V+++++ V F+
Sbjct: 80 VHKVLGGGKPADIFMWKNKKMSGGVLGGATAAWVVFELMEYHLLTLLCHVMIVVLAVLFL 139
Query: 97 RIKVAGLLNKQPRPLPELVLSEEMVSNAAASFRVKVNNMLMIAHDITLGKDXXXXXXXXX 156
+NK P +PE+ + EE + A+ R+++N +I G+D
Sbjct: 140 WSNATMFINKSPPKIPEVHIPEEPILQLASGLRIEINRGFSSLREIASGRDLKKFLIAIA 199
Query: 157 XXXXXXXIGNFCSSITLAYFGTIALVTIPALYSKNQEQVDRYAGMVHRNISRHYKIVDEN 216
+G + +TLAY + L T+P Y K +++VD + + Y ++DE
Sbjct: 200 GLWVLSILGGCFNFLTLAYIALVLLFTVPLAYDKYEDKVDPLGEKAMIELKKQYAVLDEK 259
Query: 217 VMSRLPRSFIRDKE 230
V+S++P +++K+
Sbjct: 260 VLSKIPLGPLKNKK 273
>AT2G15280.1 | chr2:6640191-6641414 FORWARD LENGTH=202
Length = 201
Score = 112 bits (280), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 97/186 (52%)
Query: 36 SVHRIAGGGKAADIILWKRGRVTIGVIFGATMAWWLFEKSGLSFLTVCSDVLLILIVVQF 95
SVH+ G AD+I+WK R ++ T+ W+LFEK G SF + L+ +V+ F
Sbjct: 4 SVHQSIRFGSVADLIMWKNRRGGFLLLGSTTLLWFLFEKCGYSFFPFVVNTQLLSVVILF 63
Query: 96 IRIKVAGLLNKQPRPLPELVLSEEMVSNAAASFRVKVNNMLMIAHDITLGKDXXXXXXXX 155
+ K A L N+ LP L ++EE V A + RV +N +L +A +I +G++
Sbjct: 64 LWAKSAILFNRPMPQLPNLEITEEFVFMVADAIRVWINTVLAVAREIYVGRNAKQLFRVS 123
Query: 156 XXXXXXXXIGNFCSSITLAYFGTIALVTIPALYSKNQEQVDRYAGMVHRNISRHYKIVDE 215
+GNF + +T+ Y G + + IP LY + Q+ +D + HR I Y+ +DE
Sbjct: 124 VVLWTVSFVGNFLNFLTILYLGVVLSLLIPFLYERYQDLIDEKLSLTHRVIQTQYRKIDE 183
Query: 216 NVMSRL 221
++ ++
Sbjct: 184 RLLQKI 189
>AT3G10260.3 | chr3:3171413-3172568 REVERSE LENGTH=268
Length = 267
Score = 110 bits (275), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 95/186 (51%)
Query: 37 VHRIAGGGKAADIILWKRGRVTIGVIFGATMAWWLFEKSGLSFLTVCSDVLLILIVVQFI 96
+H + GGGK+AD++LW+ +++ V+ GAT W LFE FL++ LL+ ++ QF+
Sbjct: 72 IHHVLGGGKSADVLLWRNKKISASVLMGATAIWVLFEWINFHFLSLVCYALLLGMIAQFV 131
Query: 97 RIKVAGLLNKQPRPLPELVLSEEMVSNAAASFRVKVNNMLMIAHDITLGKDXXXXXXXXX 156
+G LN+ +P LVL ++ + + +VN L+ D+ +
Sbjct: 132 WSNASGFLNRSQSRVPRLVLPKDFFAEVGVAVGKEVNRGLLFLQDLACKGNLKQFLMAVI 191
Query: 157 XXXXXXXIGNFCSSITLAYFGTIALVTIPALYSKNQEQVDRYAGMVHRNISRHYKIVDEN 216
+G+ C+ +T+ Y G + T+P LY + +++VD + + HYK +D
Sbjct: 192 GLWVAAMVGSCCNFLTVLYIGFVGAHTMPVLYERYEDEVDGFMDSMIMKFHSHYKKLDTG 251
Query: 217 VMSRLP 222
+SR+P
Sbjct: 252 FLSRIP 257
>AT1G64090.2 | chr1:23789395-23790669 FORWARD LENGTH=272
Length = 271
Score = 108 bits (271), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 109/217 (50%), Gaps = 23/217 (10%)
Query: 37 VHRIAGGGK----------------AADIILWKRGRVTIGVIFGATMAWWLFEKSGLSFL 80
+H++ GGGK AADI LW+ +V+ GV+ AT++W LFE + L
Sbjct: 55 LHKLFGGGKHSENQDINERFGLVFAAADIFLWRNKKVSGGVLGAATVSWILFELLEYNLL 114
Query: 81 TVCSDVLLILIVVQFIRIKVAGLLNKQPRPLPELVLSEEMVSNAAASFRVKVNNMLMIAH 140
T+ + ++ + V F+ + ++K P +PE+ + E++V A+ R+++N +
Sbjct: 115 TLFGHISILALAVLFLWSSASTFIHKSPLHIPEVHIPEDVVLQLASGLRIEINRGFTVLR 174
Query: 141 DITLGKDXXXXXXXXXXXXXXXXIGNFCSSITLAYFGTIALVTIPALYSKNQEQVDRYAG 200
DI G+D +G+ C+ +TL Y T+ L TIP LY K +++VD +
Sbjct: 175 DIASGRDLKKFLLVIAGLWVLSKVGSSCNFLTLIYIATVLLFTIPVLYEKYEDKVDDFGE 234
Query: 201 MVHRNISRHYKIVD----ENVMSRLPR---SFIRDKE 230
R I + Y D VMS++P+ +FI+ K+
Sbjct: 235 KAMREIKKQYVEFDVKVLSKVMSKIPKGAFAFIKKKD 271
>AT5G41600.1 | chr5:16636230-16637472 FORWARD LENGTH=258
Length = 257
Score = 107 bits (267), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 97/199 (48%), Gaps = 4/199 (2%)
Query: 37 VHRIAGGGKAADIILWKRGRVTIGVIFGATMAWWLFEKSGLSFLTVCSDVLLILIVVQFI 96
VH++ GGGK ADI LW+ +V+ GV+ T +W LFE L + + F+
Sbjct: 59 VHKVLGGGKPADIFLWRNKKVSGGVLGAVTASWVLFELFEYHLLAFLCHFAIFALAALFL 118
Query: 97 RIKVAGLLNKQPRPLPELVLSEEMVSNAAASFRVKVNNMLMIAHDITLGKDXXXXXXXXX 156
++K +PE+ + E+ + + R+++N L + +I GKD
Sbjct: 119 WSNACTFIHKSTPHIPEVHIPEDPILQLVSGLRIEINRGLTLLRNIASGKDVKKFILVIA 178
Query: 157 XXXXXXXIGNFCSSITLAYFGTIALVTIPALYSKNQEQVDRYAGMVHRNISRHYKIVDEN 216
IG+ + +TL Y T+ L TIP LY K +++VD Y R I + Y ++DE
Sbjct: 179 GLWVLSIIGSCYNFLTLFYTATVLLFTIPVLYEKYEDKVDAYGEKAMREIKKQYAVLDEK 238
Query: 217 VM----SRLPRSFIRDKED 231
V+ S++PR + K+D
Sbjct: 239 VLRKVISKIPRGALNKKKD 257
>AT2G46170.1 | chr2:18965410-18966940 FORWARD LENGTH=256
Length = 255
Score = 103 bits (258), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 100/193 (51%)
Query: 37 VHRIAGGGKAADIILWKRGRVTIGVIFGATMAWWLFEKSGLSFLTVCSDVLLILIVVQFI 96
VH++ GGGK AD+ LW+ +++ V+ AT W LFE L++ + ++ + F+
Sbjct: 59 VHKVLGGGKPADVFLWRDKKLSGAVLGVATAIWVLFELVEYHLLSLLCHISILALGGLFL 118
Query: 97 RIKVAGLLNKQPRPLPELVLSEEMVSNAAASFRVKVNNMLMIAHDITLGKDXXXXXXXXX 156
L+NK +PE+ + EE A+S R ++N +I I LG+D
Sbjct: 119 WSNAHTLINKTSPQIPEIHVPEEAFLVVASSLRNELNQAFVILRSIALGRDLKKFLMVVV 178
Query: 157 XXXXXXXIGNFCSSITLAYFGTIALVTIPALYSKNQEQVDRYAGMVHRNISRHYKIVDEN 216
+GN+ + +TL Y + L T+P LY K++++VD A + + + Y + DE
Sbjct: 179 GLWIISVVGNWFNFLTLVYICFVILHTVPMLYEKHEDKVDPLAEKAMKELQKQYVVFDEK 238
Query: 217 VMSRLPRSFIRDK 229
V+S++P + ++ K
Sbjct: 239 VLSKIPIASLKAK 251
>AT3G54120.1 | chr3:20041269-20042133 REVERSE LENGTH=204
Length = 203
Score = 92.8 bits (229), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 87/160 (54%)
Query: 36 SVHRIAGGGKAADIILWKRGRVTIGVIFGATMAWWLFEKSGLSFLTVCSDVLLILIVVQF 95
++H I GGG AD++LW++ V++G++ +W +FE + T+ S VLL+L+ + F
Sbjct: 14 TIHEILGGGIVADVMLWRKKNVSVGIVTVTIASWMVFEAFAYTIFTLISSVLLLLLSILF 73
Query: 96 IRIKVAGLLNKQPRPLPELVLSEEMVSNAAASFRVKVNNMLMIAHDITLGKDXXXXXXXX 155
+ K A +LN+ PLPE +SE M A+ R+ VN +L ++HDI + +D
Sbjct: 74 LWSKSASILNRPSPPLPEFQISEAMAEEASIWLRIHVNKLLQVSHDIAMARDSELYTKVA 133
Query: 156 XXXXXXXXIGNFCSSITLAYFGTIALVTIPALYSKNQEQV 195
IG+ TL + + ++T+PA Y + ++ +
Sbjct: 134 VSLFLLSLIGSLMDFQTLCHTSVLVVMTVPAFYERYEDYI 173
>AT3G19460.2 | chr3:6747913-6748904 FORWARD LENGTH=219
Length = 218
Score = 80.9 bits (198), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 91/204 (44%), Gaps = 37/204 (18%)
Query: 46 AADIILWKRGRVTIGVIFGATMAWWLFEKSGLSFLTVCSDVLLILIVVQFIRIKVAGLLN 105
AD++LW+ + ++ +T W+LFE++G + L+ S+VLL+L+ + F+ K A +LN
Sbjct: 6 VADLLLWRNRTGAVILLISSTGFWFLFERAGYNLLSFVSNVLLLLVAIFFLWAKSATVLN 65
Query: 106 KQPRPLPELVLSEEMVSNAAASFRVKVNNMLMIAHDITLGKD------------------ 147
+ P+P + + EE + AA RV +N +L IA DIT+ ++
Sbjct: 66 RPLPPVPNMEIPEEFANKAADDLRVWINYVLSIASDITIARNPIRLLQVFFHHLWQTICC 125
Query: 148 ----------------XXXXXXXXXXXXXXXXIGNFCSSITLAYFGTIALVTIPALYSKN 191
+G +S+TL Y G + ++ P +Y K
Sbjct: 126 IFLFLHVMYLTVHISFVFAVKQVSLVLWAISYVGTLINSLTLVYIGVLLSLSFPIVYEKY 185
Query: 192 QEQVDRYAGMVH---RNISRHYKI 212
Q+ +D RNISR + +
Sbjct: 186 QDHIDEKVNSTSKFVRNISRKFPL 209
>AT4G01230.1 | chr4:516264-517408 REVERSE LENGTH=243
Length = 242
Score = 77.4 bits (189), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 93/189 (49%), Gaps = 7/189 (3%)
Query: 36 SVHRIAGGGKAADIILWKRGRVTIGVIFGATMAWWLFEKSGLSFLT-VCSDVLLILIVVQ 94
+H + GG AAD++LW+ +VT+G++ T+ W LF G LT +C +L L++
Sbjct: 60 PIHMVLGG--AADVLLWRDKKVTLGLLSAVTVIWLLFGFGGRRLLTSLCRGSILFLLLSF 117
Query: 95 FIRIKVAGLLNKQPRPLPELVLSEEMVSNAAASFRVKVNNMLMIAHDITLGKDXXXXXXX 154
+ LNK P + ++ + E+ + AA++ ++N I L +D
Sbjct: 118 ----LWSNALNKSPENMMDIYIPEKPLLQAASAMTFELNCAFATLRSIALERDIKNFVMA 173
Query: 155 XXXXXXXXXIGNFCSSITLAYFGTIALVTIPALYSKNQEQVDRYAGMVHRNISRHYKIVD 214
IGN+ S ++L Y + + T+P LY K ++++D A + +HY++ +
Sbjct: 174 VIGLWLVSVIGNWFSFLSLLYICFVLIHTVPMLYEKYEDEIDPIAEKAVIEMKKHYQVFE 233
Query: 215 ENVMSRLPR 223
+S++P
Sbjct: 234 AKFLSKIPH 242
>AT3G61560.2 | chr3:22777918-22779171 FORWARD LENGTH=265
Length = 264
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 90/205 (43%), Gaps = 13/205 (6%)
Query: 37 VHRIAGGGKAADIILWKRGRVTIGVIFGATMAWWLFEKSGLSFLTVCSDVLLILIVVQFI 96
VH++ GGG AD+ LW+ +++ V+ AT W LFE FL++ +L+ + F+
Sbjct: 59 VHKVLGGGLPADVFLWRDKKLSASVLGVATAIWVLFELVEYHFLSLVCHILIFALAALFL 118
Query: 97 RIKVAGLLNKQPRPLPELVLSEEMVSNAAASFRVKV--NNMLMIAHDI--TLGKDXXXXX 152
+NK P + +E+ F+ + I+H++ + +
Sbjct: 119 LSNAHAFMNKGTFPY-DCFCTEKRAEPGLCYFKEHCLRKGLEEISHELIQSTYETFSIMG 177
Query: 153 XXXXXXXXXXXIGNF-------CSS-ITLAYFGTIALVTIPALYSKNQEQVDRYAGMVHR 204
G F C + L + L T+P LY K++++VD A +
Sbjct: 178 FVTRTSIYIGISGGFWAVDNLGCGKLVQLLDSCFVVLHTVPMLYEKHEDKVDPVAEKTLK 237
Query: 205 NISRHYKIVDENVMSRLPRSFIRDK 229
+ +HY + DE V+S+LP + ++ K
Sbjct: 238 ELKKHYMVFDEKVLSKLPVASLKAK 262
>AT1G68230.2 | chr1:25572185-25572921 FORWARD LENGTH=163
Length = 162
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 71/139 (51%), Gaps = 8/139 (5%)
Query: 42 GGGKAADIILWKRGRVTIGVIFGA-TMAWWLFEKSGLSFLT-VCS-DVLLILIVVQFIRI 98
GGG+ ADI+ WK + + G I G T+ W+LFE F+T +C +L I I + + I
Sbjct: 27 GGGRFADIMFWKNKKES-GTILGVFTLIWFLFEVVEYPFITFLCQILLLFIFIFLIWSYI 85
Query: 99 KVAGLLNKQPRPLPELVLSEEMVSNAAASFRVKVNNMLMIAHDITLGKDXXXXXXXXXXX 158
+ L+ +P + +L +SE SN F K+N ++ +DI+ GKD
Sbjct: 86 GSSQLIQSKPPSINDLRISE---SNWRFLFN-KINWFIIKLYDISSGKDFRLLFLAVVSL 141
Query: 159 XXXXXIGNFCSSITLAYFG 177
+GN+ SS+TL Y G
Sbjct: 142 WILSVVGNYFSSLTLLYIG 160
>AT2G23640.1 | chr2:10057554-10059042 FORWARD LENGTH=207
Length = 206
Score = 50.8 bits (120), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/172 (20%), Positives = 71/172 (41%)
Query: 48 DIILWKRGRVTIGVIFGATMAWWLFEKSGLSFLTVCSDVLLILIVVQFIRIKVAGLLNKQ 107
DI LW+R ++ + +T W L G + +T+ S + + ++ + F+ + LL+K
Sbjct: 18 DIYLWRRKKLAFSTLLVSTSTWILLSFYGFTTITIVSWIGIAVVSMIFLWGSLLRLLSKV 77
Query: 108 PRPLPELVLSEEMVSNAAASFRVKVNNMLMIAHDITLGKDXXXXXXXXXXXXXXXXIGNF 167
L L +SEE V S R+ + M+ + + IGN
Sbjct: 78 EPELSGLEVSEEFVVETVRSCRMLMEEMVRWMFRVGAESEWFVFARTVLGFWILSRIGNL 137
Query: 168 CSSITLAYFGTIALVTIPALYSKNQEQVDRYAGMVHRNISRHYKIVDENVMS 219
T + G + +T+P L+ + +Q+ ++ G + Y E ++
Sbjct: 138 LDFHTCLFIGLVMGLTVPKLWEEYGDQIQKHLGSLKDKSKGAYNTTHEKILE 189
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.323 0.136 0.395
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 3,880,387
Number of extensions: 134897
Number of successful extensions: 358
Number of sequences better than 1.0e-05: 15
Number of HSP's gapped: 345
Number of HSP's successfully gapped: 15
Length of query: 231
Length of database: 11,106,569
Length adjustment: 95
Effective length of query: 136
Effective length of database: 8,502,049
Effective search space: 1156278664
Effective search space used: 1156278664
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 110 (47.0 bits)