BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0335600 Os03g0335600|AK100513
(572 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G14610.1 | chr1:5008502-5014486 REVERSE LENGTH=1109 758 0.0
AT5G16715.1 | chr5:5485353-5493229 FORWARD LENGTH=975 392 e-109
AT4G04350.1 | chr4:2128129-2133030 FORWARD LENGTH=974 98 1e-20
AT4G10320.1 | chr4:6397526-6404509 REVERSE LENGTH=1191 94 2e-19
AT5G49030.1 | chr5:19875091-19882291 REVERSE LENGTH=1094 77 3e-14
>AT1G14610.1 | chr1:5008502-5014486 REVERSE LENGTH=1109
Length = 1108
Score = 758 bits (1957), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/533 (66%), Positives = 423/533 (79%), Gaps = 4/533 (0%)
Query: 37 QAQPALDVLKKVEKKHRGKAVEDENPEDFIDQDTPNGQKKLLAPQMANQYCPSTVEKSWY 96
QA+ +V KK KK + +ENPEDF+D +TP G++K L+ QMA QY P+TVEKSWY
Sbjct: 91 QAKDGTNVPKKSAKKSSKRDASEENPEDFVDPETPLGERKRLSSQMAKQYSPATVEKSWY 150
Query: 97 AWWESSGYFRADSASTKPPFVIVMPPPNVTGALHIGHALTVAIEDAMIRWRRMSGYNALW 156
AWWE S F+AD+ S+KPPFVIV+PPPNVTGALHIGHALT AIED +IRW+RMSGYNALW
Sbjct: 151 AWWEKSDLFKADAKSSKPPFVIVLPPPNVTGALHIGHALTSAIEDTIIRWKRMSGYNALW 210
Query: 157 VPGVDHAGIATQVVVEKKLMRERNLTRHDIGPDNFVCEVLKWKERYGGTILNQLHRLGAS 216
VPGVDHAGIATQVVVEKK+MR+R +TRHD+G + FV EV KWK +YGGTIL QL RLGAS
Sbjct: 211 VPGVDHAGIATQVVVEKKIMRDRGMTRHDVGREEFVKEVWKWKNQYGGTILTQLRRLGAS 270
Query: 217 LDWSREAFTMDEQRSNAVTEAFVRLHKEGLIYRDNRLVNWDCTLLTSISEIEVDHIDLKE 276
LDWSRE FTMDEQRS AVTEAFVRL+KEGLIYRD RLVNWDC L T+IS++EV++ID+KE
Sbjct: 271 LDWSRECFTMDEQRSKAVTEAFVRLYKEGLIYRDIRLVNWDCILRTAISDVEVEYIDIKE 330
Query: 277 ETMLKIPGYATPVQFGVLISFAYPLEEGLGEIVVATTRIETMLGDTAIAVHPEDKRYMHL 336
+T+LK+PGY PV+FG+L SFAYPLE GLGE++VATTR+ETMLGDTAIA+HP+D RY HL
Sbjct: 331 KTLLKVPGYEKPVEFGLLTSFAYPLEGGLGEVIVATTRVETMLGDTAIAIHPDDARYKHL 390
Query: 337 HGRYAVHPFNGRKLKIICDAEIVDPSFGTGAVKIAPAHDPNDFEVGRRNNLQFINILTDD 396
HG++AVHPFNGRKL IICD +VDP+FGTG VKI PAHDPND EVG+R+ L+FINI TDD
Sbjct: 391 HGKFAVHPFNGRKLPIICDGILVDPNFGTGCVKITPAHDPNDCEVGKRHKLEFINIFTDD 450
Query: 397 GKINSNGGAQFEGMPRFTARICIIEXXXXXXXXXXXXNTETSLGICSRTNDIVEPMIKSP 456
GKIN+NGG+ F GMPRF AR ++E N E LG+CSRTND++EPMIK P
Sbjct: 451 GKINTNGGSDFAGMPRFAAREAVVEALQKQGLYRGAKNNEMRLGLCSRTNDVIEPMIK-P 509
Query: 457 QWFVNCNTMAKVALDAV---RSKRIEIIPPQYEQDWYRWLENIRDWCVSRQHWWGHRVPA 513
QW+VNC+ + K ALD +K++E +P QY +W RWLENIRDWC+SRQ WWGHR+PA
Sbjct: 510 QWYVNCSMIGKEALDVAITDENKKLEFVPKQYTAEWRRWLENIRDWCISRQLWWGHRIPA 569
Query: 514 WYVTLEDDQEKTLGSDNDRWIXXXXXXXXXXXXXXXYPGKKFILNQDPDVLDT 566
WY TLE+DQ K +G+ +D W+ + GKKF L +DPDVLDT
Sbjct: 570 WYATLEEDQLKEVGAYSDHWVVARTEDDAREEAAQKFLGKKFELTRDPDVLDT 622
>AT5G16715.1 | chr5:5485353-5493229 FORWARD LENGTH=975
Length = 974
Score = 392 bits (1008), Expect = e-109, Method: Compositional matrix adjust.
Identities = 214/496 (43%), Positives = 295/496 (59%), Gaps = 31/496 (6%)
Query: 72 NGQKKLLAPQMANQYCPSTVEKSWYAWWESSGYFRADSASTKPPFVIVMPPPNVTGALHI 131
+G +P+ + + S+ EK Y WWES GYF+ + PFVI MPPPNVTG+LH+
Sbjct: 59 SGNNVFTSPETSKTFDFSSEEKI-YKWWESQGYFKPNFDQGGSPFVIPMPPPNVTGSLHM 117
Query: 132 GHALTVAIEDAMIRWRRMSGYNALWVPGVDHAGIATQVVVEKKLMRERNLTRHDIGPDNF 191
GHA+ V +ED M+R+ RM+G LW+PG DHAGIATQ+VVEK L E + R D+G D F
Sbjct: 118 GHAMFVTLEDIMVRYNRMNGRPTLWLPGTDHAGIATQLVVEKMLASE-GIKRVDLGRDEF 176
Query: 192 VCEVLKWKERYGGTILNQLHRLGASLDWSREAFTMDEQRSNAVTEAFVRLHKEGLIYRDN 251
V +WKE+YGGTI NQ+ RLGAS DWSRE FT+DEQ S AV EAFV+LH +GLIY+ +
Sbjct: 177 TKRVWEWKEKYGGTITNQIKRLGASCDWSRERFTLDEQLSRAVVEAFVKLHDKGLIYQGS 236
Query: 252 RLVNWDCTLLTSISEIEVDHIDLKEETMLKIPGYATPVQFGVLISFAYPLEEGLGEIVVA 311
+VNW L T++S++EV++ EE PG+ +++ V S + + +A
Sbjct: 237 YMVNWSPNLQTAVSDLEVEY---SEE-----PGFLYHIKYRVAGSPDF--------LTIA 280
Query: 312 TTRIETMLGDTAIAVHPEDKRYMHLHGRYAVHPFN-GRKLKIICDAEIVDPSFGTGAVKI 370
TTR ET+ GD A+AVHPED RY G+ A+ P GR + II D + VD FGTG +KI
Sbjct: 281 TTRPETLFGDVALAVHPEDDRYSKYVGQTAIVPMTYGRHVPIIAD-KYVDKDFGTGVLKI 339
Query: 371 APAHDPNDFEVGRRNNLQFINILTDDGKINSNGGAQFEGMPRFTARICIIEXXXXXXXXX 430
+P HD ND+ + R+ L +N++ D +N G F G+ RF R +
Sbjct: 340 SPGHDHNDYLLARKLGLPILNVMNKDATLNDVAGL-FCGLDRFEVREKLWADLEEIGLAV 398
Query: 431 XXXNTETSLGICSRTNDIVEPMIKSPQWFVNCNTMAKVALDAVRSKRIEIIPPQYEQDWY 490
+ R +++EP++ S QWFV+ + +A+ AL AV +K + IIP ++E+ +
Sbjct: 399 KKEPHTLRVPRSQRGGEVIEPLV-SKQWFVHMDPLAEKALLAVENKELTIIPERFEKIYN 457
Query: 491 RWLENIRDWCVSRQHWWGHRVPAWYVTLEDDQEKTLGSDNDRWIXXXXXXXXXXXXXXXY 550
WL NI+DWC+SRQ WWGHR+P WYV +D +E +I Y
Sbjct: 458 HWLTNIKDWCISRQLWWGHRIPVWYVVGKDCEED--------YIVAKSAEEALEKALEKY 509
Query: 551 PGKKFILNQDPDVLDT 566
GK + QDPDVLDT
Sbjct: 510 -GKDVEIYQDPDVLDT 524
>AT4G04350.1 | chr4:2128129-2133030 FORWARD LENGTH=974
Length = 973
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 123/497 (24%), Positives = 181/497 (36%), Gaps = 134/497 (26%)
Query: 91 VEKSWYAWWESSGYFRA--DSASTKPPFVIVMPPPNVTGA-LHIGHALTVAIEDAMIRWR 147
+E W +WE + FR D ++KP F ++ P +GA LH+GH L D + R R
Sbjct: 90 IEPKWQRYWEDNRIFRTPDDVDTSKPKFYVLDMFPYPSGAGLHVGHPLGYTATDILARLR 149
Query: 148 RMSGYNALWVPGVDHAGIATQVVVEKKLMRERNLTRHDIGPDNFVCEVLKWKERYGGTIL 207
RM GYN L G D G+ + + + T +I D F
Sbjct: 150 RMQGYNVLHPMGWDAFGLPAEQYAIETGTHPKTTTLKNI--DRFRL-------------- 193
Query: 208 NQLHRLGASLDWSREAFTMDEQRSNAVTEAFVRLHKEGLIYRDNRLVNWDCTLLTSISEI 267
QL LG S DW RE T + F++L+K+GL Y+ VNW L T ++
Sbjct: 194 -QLKSLGFSYDWDRELSTTEPDYYKWTQWIFLQLYKKGLAYQAEVPVNWCPALGTVLANE 252
Query: 268 E-VDHIDLK----------EETMLKIPGYATPV-----------------------QFGV 293
E VD + + + MLKI YA + G
Sbjct: 253 EVVDGVSERGGHPVIRKPMRQWMLKITAYADRLLEDLDELEWPESIKEMQRNWIGRSEGA 312
Query: 294 LISFAYPLEEGL---GEIVVATTRIETMLGDTAIAVHPEDKRYMH--------------- 335
++F+ EG EI V TTR +T+ G T + V PE + +
Sbjct: 313 ELNFSILDGEGRETDKEITVYTTRPDTLFGATYMVVAPEHQLLSYFVTAEQKQQVEEYKD 372
Query: 336 --------------------LHGRYAVHPFNGRKLKIICDAEIVDPSFGTGAVKIAPAHD 375
G YA +P NG + I A+ V S+GTGA+ PAHD
Sbjct: 373 FASRKSDLERTELQKDKTGVFTGCYAKNPANGDAIPIWV-ADYVLASYGTGAIMAVPAHD 431
Query: 376 PNDFEVGRRNNLQFINILTDDGKINSNGGAQFEGMPRFTARICIIEXXXXXXXXXXXXNT 435
D E + N+ ++ ++ + + + G+ IIE
Sbjct: 432 TRDNEFALKYNIPIKWVVRNEANSSDDAKQVYPGL-------GIIE---------NSSTL 475
Query: 436 ETSLGICSRTNDIVEPMIKSPQWFVNCNTMAKVALDAVRSKRIEIIPPQYEQDWYRWLEN 495
ET L I ++ E +K +W K V K
Sbjct: 476 ETGLDINQLSSK--EAALKVIEWAERTGNGKK----KVNYK------------------- 510
Query: 496 IRDWCVSRQHWWGHRVP 512
+RDW +RQ +WG +P
Sbjct: 511 LRDWLFARQRYWGEPIP 527
>AT4G10320.1 | chr4:6397526-6404509 REVERSE LENGTH=1191
Length = 1190
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 118/511 (23%), Positives = 204/511 (39%), Gaps = 85/511 (16%)
Query: 92 EKSWYAWWESSGYFRADSASTK--PPFVIVMPPPNVTGALHIGHALTVAIEDAMIRWRRM 149
E+ ++W F+ T+ P ++ PP TG H GH L I+D + R++ M
Sbjct: 16 EEDVLSFWTEIDAFKTQLKRTENLPEYIFYDGPPFATGLPHYGHILAGTIKDIVTRYQTM 75
Query: 150 SGYNALWVPGVDHAGIATQVVVEKKLMRERNLTRHDIGPDNFVCEVLKWKERYGGTILNQ 209
+G++ G D G+ + +++KL +R +G D + E RY
Sbjct: 76 TGHHVTRRFGWDCHGLPVENEIDRKLNIKRRDEVIKMGIDKYNEECRSIVTRYVAEWEKV 135
Query: 210 LHRLGASLDWSREAFTMDEQRSNAVTEAFVRLHKEGLIYRDNRLVNWDCTLLTSISEIEV 269
+ R G +D+ + TMD +V F +L ++ L+YR +++ + T +S E
Sbjct: 136 ITRCGRWIDFKNDYKTMDLPFMESVWWVFSQLWEKNLVYRGFKVMPYSTGCKTPLSNFEA 195
Query: 270 DHIDLKE----ETMLKIP----------------GYATPVQFGVLIS--FAYP--LEEGL 305
+ KE E M+ P + P + ++ F Y +
Sbjct: 196 GQ-NYKEVPDPEIMVTFPVIGDQDNAAFVAWTTTPWTLPSNLALCVNAKFVYVKVRNKNT 254
Query: 306 GEI-VVATTRIETM-------------LGDT------AIAVHPED--------------- 330
G++ +VA +R+ + GDT A PE
Sbjct: 255 GKVYIVAESRLSALPTDKPKAKLSNGPAGDTKKANPKAKGAKPESAADSYEVLEKFNGAS 314
Query: 331 ---KRYMHLHGRYAVHPFNGRKLKIICDAEIVDPSFGTGAVKIAPAHDPNDFEVGRRNNL 387
K+Y L ++ F+ +++ D + D S GTG V APA +D+ V N +
Sbjct: 315 LVGKKYEPLFDYFS--DFSSEAFRVVADDYVTDDS-GTGIVHCAPAFGEDDYRVCLLNKI 371
Query: 388 ----QFINILTDDGKINSNGGAQFEGMPRFTARICIIEXXXXXXXXXXXXNTETSLGICS 443
+ + + DD + + F G A IIE + S C
Sbjct: 372 IKKGENLVVAVDDDGLFTERITHFSGRYVKDADKDIIEAVKAKGRLVKTGSFTHSYPFCW 431
Query: 444 RTNDIVEPMI--KSPQWFVNCNTMAKVALDAVRSKRIEIIPPQYEQD--WYRWLENIRDW 499
R++ P+I P WFV + + L + +++ E +P Y +D ++ WLEN RDW
Sbjct: 432 RSD---TPLIYRAVPSWFVRVEQLKEKLLKS--NEQTEWVP-GYVKDKRFHNWLENARDW 485
Query: 500 CVSRQHWWGHRVPAWYVTLEDDQEKTLGSDN 530
+SR +WG +P W + DD E+ + D+
Sbjct: 486 AISRSRFWGTPLPIW---ISDDGEEVVIMDS 513
>AT5G49030.1 | chr5:19875091-19882291 REVERSE LENGTH=1094
Length = 1093
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 91/193 (47%), Gaps = 7/193 (3%)
Query: 98 WWESSGYFRADSASTKPPFVIVMPPPNVTGALHIGHALTVAIEDAMIRWRRMSGYNALWV 157
W E+ + R + F++ PP G LH+GHAL ++D + R++ + Y +V
Sbjct: 130 WEENQVFKRVSDNNNGGSFILHDGPPYANGDLHMGHALNKILKDIINRYKLLQNYKVQYV 189
Query: 158 PGVDHAGIATQVVVEKKLMRERNLTRHDIGPDNFVCEVLKWKERYGGTILNQLHRLGASL 217
PG D G+ ++ V + L +E R ++ P + K+ + T + R G
Sbjct: 190 PGWDCHGLPIELKVLQSLDQE---VRKELTPLKLRAKAAKFAKATVKTQMESFKRFGVWA 246
Query: 218 DWSREAFTMDEQRSNAVTEAFVRLHKEGLIYRDNRLVNWDCTLLTSISEIEVD----HID 273
DW+ T+D + A E F ++ +G IYR + V+W + T+++E E++ HI
Sbjct: 247 DWNNPYLTLDPEYEAAQIEVFGQMALKGYIYRGRKPVHWSPSSRTALAEAELEYPEGHIS 306
Query: 274 LKEETMLKIPGYA 286
+ K+ G A
Sbjct: 307 KSIYAIFKLVGGA 319
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.319 0.136 0.430
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 12,445,737
Number of extensions: 526253
Number of successful extensions: 1225
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 1214
Number of HSP's successfully gapped: 6
Length of query: 572
Length of database: 11,106,569
Length adjustment: 104
Effective length of query: 468
Effective length of database: 8,255,305
Effective search space: 3863482740
Effective search space used: 3863482740
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 114 (48.5 bits)