BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0314500 Os03g0314500|AK102644
(730 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G21680.1 | chr1:7613028-7615148 FORWARD LENGTH=707 344 8e-95
AT1G21670.1 | chr1:7610409-7612520 FORWARD LENGTH=704 298 6e-81
AT4G01870.1 | chr4:808473-810431 REVERSE LENGTH=653 238 1e-62
>AT1G21680.1 | chr1:7613028-7615148 FORWARD LENGTH=707
Length = 706
Score = 344 bits (883), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 251/696 (36%), Positives = 354/696 (50%), Gaps = 84/696 (12%)
Query: 7 SIAFFASYRPPVALDIFCCPAP-PSSPKDELHLTDGDSYNYNCQ-PIPPAALKTVVERLG 64
+I F R DIF P S EL +TDG+S N+N P P AL +++
Sbjct: 33 TIIFTTLGRSHYEFDIFALSTTQPPSVSGELRITDGESVNFNGYFPSPSPALLSLLP--- 89
Query: 65 VSRGDAVEGDIDSGRITGLVFVSEREHNLETLHIALRF--NDDGEVQVFSLADAYGGDGL 122
D ++ L++V+ER + +L+ L + N D + + S+ +A +
Sbjct: 90 ----DETLIQMEDSSPLHLIYVTER-NGTSSLYYDLVYGGNSDFKTKRRSVLEAPSRVQV 144
Query: 123 FSGARMED-SGCIAGGYEVDGRTVDHYLVYVSTKEPVRERRSPWNVAYKTNLRTGETERL 181
+R + SG ++ ++VYVST E E R+ W Y T L+TG T RL
Sbjct: 145 PLLSRFDHLSGMTVNSFKDKPSLSGEFIVYVSTHESSGEPRASWTAVYSTELKTGLTRRL 204
Query: 182 TPPGTFDISPSVSPSGKKVAVASYQGKKWDGEIKNLNTNIYVMSLENPSQDRERVIENGG 241
TP G D SP+VSPSG AVASY + W GE++ L T+IYV L R +V+E+GG
Sbjct: 205 TPSGVADFSPAVSPSGNLTAVASYGERGWTGEVEELRTDIYVF-LTRDGSHRVKVVEHGG 263
Query: 242 WPSWGSEDVIFFHRKDGDGENSCW-GVFRHTLS-----TGETV---RVTPAAFDSVTPAA 292
WP W E ++FHR+ E W V+R L T E+V RVTP + TPA
Sbjct: 264 WPCWVDESTLYFHRRS---EEDGWISVYRAILPENGPLTTESVTIQRVTPPGVHAFTPAT 320
Query: 293 IDETR--VAVAAIRQKSEFSDVRVEAQYRHIEVFDMRSPEQPMQITRNTRPKADHFNPFV 350
VAVA R S+ YRH+E+FD++ E +++TR PK+ H NPF+
Sbjct: 321 SPNNHEFVAVATRRPGSD---------YRHVELFDLKRNEF-IELTRLVAPKSHHLNPFL 370
Query: 351 MDGGKFIGYHRCKSELLQHGDDLPRKF-HKLQSPHEDVGVFRVSGVFPTFSKDGSQLAFV 409
+GYH C+ + +G P F +Q+ D+ +FR+ G FP+FS G ++A+V
Sbjct: 371 SPDSSRVGYHSCRGD--ANGRRSPLLFLENIQTTTRDLSLFRIDGSFPSFSPGGDRIAYV 428
Query: 410 DNEFKSVWLADSQGMRVVFKTDGPDSVFSPLWNS-KKDILYVCMGPSFKASETLEIHSIH 468
V D G R V+K FS W+ + I+Y GP+F A+E E+ I
Sbjct: 429 KMPGVFVVKPDGSGQREVYK----GMAFSTAWDPVRPGIVYSSSGPTF-ATERTEVDVIS 483
Query: 469 -NVSTGDRKS--RQLTFGGFNNAFPSTNPDGTKFVFRSTRDGGAKYSKNLYIMEDADAGE 525
+V D+ S R+LT G NNAFP +PDG + VFRS R G KNLYIM DA +
Sbjct: 484 IDVDAADKSSSVRRLTTNGKNNAFPWPSPDGKRIVFRSGRTG----HKNLYIM---DAEK 536
Query: 526 GEDGSQSTVTRMTAGEWTDTHCQWSPNGKWIVFSSNRDRPADAPERDHGLDPGYFAVYLM 585
GE G + R+T G WTDT C WSP+G+WI F+S+R+ P G F ++L+
Sbjct: 537 GESGG---LWRLTEGAWTDTMCNWSPDGEWIAFASDRESPGS----------GSFELFLI 583
Query: 586 DVAXXXXXXXXXXGYDVAGHVNHPVFSPDGRSIAVTSDLAAVTADPMSLPLFLHSVRPYG 645
G G NHP+FSPD +S+ TSD A ++A+P+S P H +PYG
Sbjct: 584 HPNGTGLRKLIQSG--TGGRTNHPIFSPDSKSLVFTSDYAGISAEPISNP---HHYQPYG 638
Query: 646 DIFTVDIDPDDMARNEDVEGFVRVTHSRYENSTPAW 681
DIFTV +D ++ R+TH+ YE+ TPAW
Sbjct: 639 DIFTVKLDGSNVR---------RLTHNSYEDGTPAW 665
>AT1G21670.1 | chr1:7610409-7612520 FORWARD LENGTH=704
Length = 703
Score = 298 bits (764), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 233/702 (33%), Positives = 343/702 (48%), Gaps = 102/702 (14%)
Query: 4 SRGSIAFFASY-RPPVALDIFCCPAP--PSSPKDELHLTDGDSYNYNCQPIPPAALKTVV 60
S GS F + RP DIF P P SP DE LTDG S N+N P+ T +
Sbjct: 29 SNGSTILFTTIGRPTFEFDIFTLPTSHRPPSPADEHRLTDGKSINFNGYFASPS---TAL 85
Query: 61 ERLGVSRGDAVEGDIDSGRITGLVFVSEREHNLETLHIALRFNDDG---EVQVFSLADAY 117
L R D+ L++V+ER + + ++ G +V +FS +
Sbjct: 86 ISLLPKRTQIQPQDVH------LIYVTERAGTPSLNYDVVHSDNVGSRIQVPLFSGEEQQ 139
Query: 118 GGDGLFSGARMEDSGCIAGGYEVDGRTVDHYLVYVSTKEPVRERRSPWNVAYKTNLRTGE 177
G + S M+D+ + GY LV+VST E + + W Y T LRT
Sbjct: 140 SGMNVNS---MKDTPVLTNGY----------LVHVSTHENPGKPMASWAAVYSTELRTKS 186
Query: 178 TERLTPPGTFDISPSVSPSGKKVAVASYQGKKWDGEI--KNLNTNIYVMSLENPSQDRER 235
T RLTP G D SP+VSPSGK AVAS+ K W + K +++++YV ++ +Q R +
Sbjct: 187 TRRLTPLGIADFSPAVSPSGKWTAVASFGEKGWTWSMVEKEISSDVYVFLTQDGTQ-RVK 245
Query: 236 VIENGGWPSWGSEDVIFFHRKDGDGENSCWGVFRHTL-STGETV-------RVTPAAFDS 287
V+E GGWP W + ++FHRK DG S V+R L TG RVTP +
Sbjct: 246 VVEQGGWPRWVDDSTLYFHRKSDDGWIS---VYRAILPKTGPVTTKSVTIQRVTPPGLHA 302
Query: 288 VTPAAI--DETRVAVAAIRQKSEFSDVRVEAQYRHIEVFDMRSPEQPMQITRNTRPKADH 345
TPA + +AVA R SE RH+E+FD++ E +++TR PK+ H
Sbjct: 303 FTPATSPNNNNFIAVATRRPGSEI---------RHVELFDLKKNEF-VELTRLVSPKSHH 352
Query: 346 FNPFVMDGGKFIGYHRCKSELLQHGDDLPRK-FHKLQSPHEDVGVFRVSGVFPTFSKDGS 404
FNPF+ +GYH C+ + G PR L++ D+ +FR G FP+ S +G
Sbjct: 353 FNPFLSPDSSRVGYHSCRGD--ATGRKTPRNLLQSLKTTSNDLSLFRFDGAFPSISPEGD 410
Query: 405 QLAFVDNEFKSVWLA--DSQGMRVVFKTDGPDSVFSPLWNSKKDILYVCMGPSFKASET- 461
+ AFV F V++ D G+R + G +V+ P+ + I+Y GP+ ++
Sbjct: 411 RFAFV--SFTGVFVVNPDGSGLRQLLPQMGFGTVWDPI---RHGIVYTSSGPALAPGKSQ 465
Query: 462 LEIHSIH-NVSTGDRKSRQLTFGGFNNAFPSTNPDGTKFVFRSTRDGGAKYSKNLYIMED 520
++I +I+ + + ++LT G NNAFP +PDG + VFRS R G +KNLYIM
Sbjct: 466 IDILAINVDAPSPATAVKKLTTTGENNAFPWPSPDGKRIVFRSARSG----TKNLYIM-- 519
Query: 521 ADAGEGEDGSQSTVTRMTAGEWTDTHCQWSPNGKWIVFSSNRDRPADAPERDHGLDPGYF 580
DA +GE G + R+T G W DT WSP+G WIVF+SNR+ P + + P
Sbjct: 520 -DAEKGESGG---LFRLTNGNWNDTIATWSPDGNWIVFASNREFPGTLLMNIYVVHPDGT 575
Query: 581 AVYLMDVAXXXXXXXXXXGYDVAGHVN-HPVFSPDGRSIAVTSDLAAVTADPMSLPLFLH 639
+ + ++ G V+ HP+FSPD + I T+ A ++A+ + P H
Sbjct: 576 GLRKL-------------AQNLTGLVSMHPMFSPDSKRIVFTTIYAGISAEQIGNP---H 619
Query: 640 SVRPYGDIFTVDIDPDDMARNEDVEGFVRVTHSRYENSTPAW 681
P +IFTV++D G R+TH+ E+ P W
Sbjct: 620 FNVPSSEIFTVNLDG---------SGLTRLTHNSVEDGPPMW 652
>AT4G01870.1 | chr4:808473-810431 REVERSE LENGTH=653
Length = 652
Score = 238 bits (606), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 213/721 (29%), Positives = 317/721 (43%), Gaps = 144/721 (19%)
Query: 1 MGESRGSIAFFASYRPPVALDIFCCPAPPSSPKDELHLTDGDSYNYNCQPIPPAALKTVV 60
M +G+I F R D+F S E LTDG S N+N Q +
Sbjct: 1 METPKGTIIFTTVGRTHYGFDVFSLNIATSV---ERRLTDGVSVNFNAQFV--------- 48
Query: 61 ERLGVSRGDAVEGDIDSGRITGLVFVSEREHNLETLHIALRFNDDGEVQVFSLADAYGGD 120
+ + +VFVSER +G +++
Sbjct: 49 ----------------NDKSDDVVFVSER---------------NGSARIYKTRSGISKP 77
Query: 121 GLFSGA---RMEDSGCIAGGYEVDGRTVDHYLVYVSTKEPVRERRSPWNVAYKTNLRTGE 177
GA D I T ++ L ++S E W+ Y L + +
Sbjct: 78 EQIPGAPESYFHDRPII---------TQNNRLYFISAHEQPDRYFKNWSALYTVELNSAK 128
Query: 178 TE--RLTPPGTFDISPSVSPSGKKVAVASYQGKKWDGEIKNLNTNIYVMSLENPSQDRER 235
E R+TPP T D SP+VS SG +AVASY + W GE +NT+I V P + R
Sbjct: 129 REVTRVTPPDTADFSPAVSQSGDFLAVASYGTRSWGGEFHEINTDITVFKASKP-ETRVV 187
Query: 236 VIENGGWPSWGSEDVIFFHRKDGDGENSCWGVFRHTLSTGET---------VRVTPAAFD 286
+ E GGWP+W + +FFH + DG W +FR + T +RVTP+
Sbjct: 188 ICERGGWPTWSGDSTVFFHHQADDG---WWSIFRVDIPENFTEYTDFPITPIRVTPSGLH 244
Query: 287 SVTPAAI-DETRVAVAAIRQKSEFSDVRVEAQYRHIEVFDMRSPE-QPMQITRNTRPKAD 344
TPAA D R+A+A R+ +RHIE++D+ + QP +T + P
Sbjct: 245 CFTPAAFRDGKRIALATRRRG---------VNHRHIEIYDLENTTFQP--VTESLNPSFH 293
Query: 345 HFNPFVMDGGKFIGYHRCKSELLQHGDDLPRKFHKLQSPHEDVGVFRVSGVFPTFSKDGS 404
H+NPFV +F+GYHR + E Q G+ + + SP + + + R++G FP+ S +G
Sbjct: 294 HYNPFVSPDSEFLGYHRFRGESTQ-GESIVPNIESIVSPIKTLRLLRINGSFPSSSPNGD 352
Query: 405 QLAFVDNEFKSVWLADSQGMRVVFKTDGPD--------SVFSPLWN-SKKDILYVCMGPS 455
+A ++++F D G V K+DG + F W+ +++ ++Y +GP
Sbjct: 353 LIA-LNSDF------DINGGIKVSKSDGSKRWTLIKDRTAFYNSWSPTERHVIYTSLGPI 405
Query: 456 FK-ASETLEIHSIH---NVSTGDRKS-----RQLTFGGF-NNAFPSTNPDGTKFVFRSTR 505
F A ++I I + T D++ + LT NNAFPS +PDG VFRS R
Sbjct: 406 FSPARIAVQIARIKFDPSDLTADKEDLPCDVKILTLENTGNNAFPSCSPDGKSIVFRSGR 465
Query: 506 DGGAKYSKNLYIMEDADAGEGEDGSQSTVTRMTAGEWTDTHCQWSPNGKWIVFSSNRDRP 565
G KNLYI+ DA GE G + R+T G W DT WSP G I FSSNR P
Sbjct: 466 SG----HKNLYIV-DAVNGESNGGG---IRRLTDGPWIDTMPCWSPKGDLIGFSSNRHNP 517
Query: 566 ADAPERDHGLDPGYFAVYLM---DVAXXXXXXXXXXGYDVAG--HVNHPVFSPDGRSIAV 620
+ F Y++ G + A VNH F+ DG +
Sbjct: 518 ENT---------AVFGAYVVRPDGTGLRRIQISGPEGSEEAARERVNHVSFNKDGDWLVF 568
Query: 621 TSDLAAVTADPMSLPLFLHSVRPYGDIFTVDIDPDDMARNEDVEGFVRVTHSRYENSTPA 680
++L+ VTA+P+++P + +PYGD++ V +D G R+T + YE+ TP
Sbjct: 569 AANLSGVTAEPVTMP---NQFQPYGDLYVVKLDG---------TGLRRLTWNGYEDGTPT 616
Query: 681 W 681
W
Sbjct: 617 W 617
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.317 0.135 0.423
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 18,112,653
Number of extensions: 857946
Number of successful extensions: 1925
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 1880
Number of HSP's successfully gapped: 3
Length of query: 730
Length of database: 11,106,569
Length adjustment: 106
Effective length of query: 624
Effective length of database: 8,200,473
Effective search space: 5117095152
Effective search space used: 5117095152
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 115 (48.9 bits)