BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0314200 Os03g0314200|AK100769
(552 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G46340.1 | chr5:18796361-18799725 REVERSE LENGTH=541 794 0.0
AT2G34410.1 | chr2:14518719-14522053 FORWARD LENGTH=541 783 0.0
AT1G29890.2 | chr1:10463532-10467153 FORWARD LENGTH=585 746 0.0
AT3G06550.2 | chr3:2039408-2042664 REVERSE LENGTH=569 737 0.0
>AT5G46340.1 | chr5:18796361-18799725 REVERSE LENGTH=541
Length = 540
Score = 794 bits (2050), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/532 (71%), Positives = 436/532 (81%), Gaps = 1/532 (0%)
Query: 19 LTPGQVSALLGFLWVFTAWAYAEVLYYRKNAASIKAHSDVNLAVMDSSSNKGEDQVMLLE 78
+TPGQVS LLG + +F W Y+E+L YRK+ +K HSD NL + + K +D+ LLE
Sbjct: 7 ITPGQVSFLLGVIPIFVGWIYSELLEYRKSWVPLKPHSDNNLVELGDVAEKDDDKADLLE 66
Query: 79 EGV-QAPVQKPVYASLTSQMFRLFLLDQALILENRLTLRAISEFGGHLLYFYICDRTNLL 137
G+ ++P K +S+ + + R ++ + +LE+R TLRA+SEFG L+YFYICDRT LL
Sbjct: 67 GGLARSPSVKFHNSSIRTNIIRFLSMEDSFLLEHRATLRAMSEFGAILIYFYICDRTELL 126
Query: 138 GESAKNYSRDMFLFLYFLLIIVAAMTSFKVHQDKSSFTGKSILYLNRHQTEEWKGWMQVL 197
G+S KNY+RD+FLFLY LLIIV+AMTS + H DKS +GKSILYLNRHQTEEWKGWMQVL
Sbjct: 127 GDSTKNYNRDLFLFLYVLLIIVSAMTSLRKHNDKSPISGKSILYLNRHQTEEWKGWMQVL 186
Query: 198 FLMYHYFNAKEIYNAIRVFIAAYVWMTGFGNFSYYYVRKDFSLARFAQMMWRLNFFVAFC 257
FLMYHYF A EIYNAIR+FIAAYVWMTGFGNFSYYYVRKDFS+ARFAQMMWRLNFFVAFC
Sbjct: 187 FLMYHYFAAAEIYNAIRIFIAAYVWMTGFGNFSYYYVRKDFSVARFAQMMWRLNFFVAFC 246
Query: 258 CIVLNNDYTLYYICPMHTLFTLMVYGALGILNKYNEIGSVMAIKFVACFLVVILIWEIPG 317
CIVLNNDY LYYICPMHTLFTLMVYGALGI +KYNEIGSVMA+K +CFLVV L+WEIPG
Sbjct: 247 CIVLNNDYMLYYICPMHTLFTLMVYGALGIFSKYNEIGSVMALKIFSCFLVVFLLWEIPG 306
Query: 318 VFEIVWSPFTFLLGYTDPSKPDLPRLHEWHFRSGLDRYIWIVGMIYAYYHPTVEKWMXXX 377
FEI W P TFLLGY DP+KPDL RLHEWHFRSGLDRYIWI+GMIYAYYHPTVE+WM
Sbjct: 307 AFEIFWGPLTFLLGYNDPAKPDLHRLHEWHFRSGLDRYIWIIGMIYAYYHPTVERWMEKL 366
Query: 378 XXXXXXXXXYIKALIVSIALTAGCLWYEYIYKLDKITYNKYHPYTSWIPITVYICLRNFT 437
IKA IV+I + G +WYE IYKLD+ +YN YHPYTSWIPITVYICLRNFT
Sbjct: 367 EDCETKKRLSIKAAIVTITVLVGYVWYECIYKLDRTSYNMYHPYTSWIPITVYICLRNFT 426
Query: 438 QEFRCCSLTLFAWLGKITLETYISQFHIWLRSKVPNGQPKWLLTIIPNYPMLNFMLTTAI 497
+ R SLTLFAWLGKITLETYISQFHIWLRS +P+GQPKWLL+IIP YPMLNFMLTTAI
Sbjct: 427 HQLRSVSLTLFAWLGKITLETYISQFHIWLRSNMPDGQPKWLLSIIPGYPMLNFMLTTAI 486
Query: 498 YVAVSHRLFELTNTLKIAFVPSRDNKRLSYNFVAGIAISVALYSLSFLIVGV 549
YV VSHRLFELTNTLK FVP++DNKRL NF+AGIAI++ LY SF+++ +
Sbjct: 487 YVLVSHRLFELTNTLKTVFVPTKDNKRLFSNFIAGIAIALPLYCFSFVLLQI 538
>AT2G34410.1 | chr2:14518719-14522053 FORWARD LENGTH=541
Length = 540
Score = 783 bits (2023), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/532 (70%), Positives = 430/532 (80%), Gaps = 1/532 (0%)
Query: 19 LTPGQVSALLGFLWVFTAWAYAEVLYYRKNAASIKAHSDVNLAVMDSSSNKGEDQVMLLE 78
+TPGQVS LLG + VF AW Y+E L Y++++ K HSD NL + NK ++ V+LLE
Sbjct: 7 ITPGQVSFLLGVIPVFIAWIYSEFLEYKRSSLHSKVHSDNNLVELGEVKNKEDEGVVLLE 66
Query: 79 EGVQAPVQKPVYAS-LTSQMFRLFLLDQALILENRLTLRAISEFGGHLLYFYICDRTNLL 137
G+ V Y S + + + R L+ + ++ENR TLRA++EFG L YFYI DRT+LL
Sbjct: 67 GGLPRSVSTKFYNSPIKTNLIRFLTLEDSFLIENRATLRAMAEFGAILFYFYISDRTSLL 126
Query: 138 GESAKNYSRDMFLFLYFLLIIVAAMTSFKVHQDKSSFTGKSILYLNRHQTEEWKGWMQVL 197
GES KNY+RD+FLFLY LLIIV+AMTS K H DKS TGKSILYLNRHQTEEWKGWMQVL
Sbjct: 127 GESKKNYNRDLFLFLYCLLIIVSAMTSLKKHNDKSPITGKSILYLNRHQTEEWKGWMQVL 186
Query: 198 FLMYHYFNAKEIYNAIRVFIAAYVWMTGFGNFSYYYVRKDFSLARFAQMMWRLNFFVAFC 257
FLMYHYF A EIYNAIRVFIAAYVWMTGFGNFSYYY+RKDFSLARF QMMWRLN FVAF
Sbjct: 187 FLMYHYFAAAEIYNAIRVFIAAYVWMTGFGNFSYYYIRKDFSLARFTQMMWRLNLFVAFS 246
Query: 258 CIVLNNDYTLYYICPMHTLFTLMVYGALGILNKYNEIGSVMAIKFVACFLVVILIWEIPG 317
CI+LNNDY LYYICPMHTLFTLMVYGALGI ++YNEI SVMA+K +CFLVVI++WEIPG
Sbjct: 247 CIILNNDYMLYYICPMHTLFTLMVYGALGIFSRYNEIPSVMALKIASCFLVVIVMWEIPG 306
Query: 318 VFEIVWSPFTFLLGYTDPSKPDLPRLHEWHFRSGLDRYIWIVGMIYAYYHPTVEKWMXXX 377
VFEI WSP TFLLGYTDP+KP+LP LHEWHFRSGLDRYIWI+GMIYAY+HPTVE+WM
Sbjct: 307 VFEIFWSPLTFLLGYTDPAKPELPLLHEWHFRSGLDRYIWIIGMIYAYFHPTVERWMEKL 366
Query: 378 XXXXXXXXXYIKALIVSIALTAGCLWYEYIYKLDKITYNKYHPYTSWIPITVYICLRNFT 437
IK I++I+ G LWYEYIYKLDK+TYNKYHPYTSWIPITVYICLRN T
Sbjct: 367 EECDAKRKMSIKTSIIAISSFVGYLWYEYIYKLDKVTYNKYHPYTSWIPITVYICLRNST 426
Query: 438 QEFRCCSLTLFAWLGKITLETYISQFHIWLRSKVPNGQPKWLLTIIPNYPMLNFMLTTAI 497
Q+ R S+TLFAWLGKITLETYISQFHIWLRS VPNGQPKWLL IIP YPMLNFML TAI
Sbjct: 427 QQLRNFSMTLFAWLGKITLETYISQFHIWLRSNVPNGQPKWLLCIIPEYPMLNFMLVTAI 486
Query: 498 YVAVSHRLFELTNTLKIAFVPSRDNKRLSYNFVAGIAISVALYSLSFLIVGV 549
YV VSHRLFELTNTLK F+P++D+KRL +N +AG AIS LY S +++ +
Sbjct: 487 YVLVSHRLFELTNTLKSVFIPTKDDKRLLHNVLAGAAISFCLYLTSLILLQI 538
>AT1G29890.2 | chr1:10463532-10467153 FORWARD LENGTH=585
Length = 584
Score = 746 bits (1926), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/558 (66%), Positives = 424/558 (75%), Gaps = 40/558 (7%)
Query: 19 LTPGQVSALLGFLWVFTAWAYAEVLYYRKNAASIKAHSDVNLAVMDSSSNKGEDQVMLLE 78
+TPGQVS LLG + + AW Y+E L YR+++ K HSD NL ++ +NK ++ +L+E
Sbjct: 12 ITPGQVSFLLGVIPLMIAWLYSEFLEYRRSSFHAKVHSDKNLVELEMVTNKEDEGTVLME 71
Query: 79 EGVQAPVQKPVYAS-LTSQMFRLFLLDQALILENRLTLRAISEFGGHLLYFYICDRTNLL 137
G+ Y+S + + + R L+ + +LENR TLRA++EFG LLYFYICDRT+L+
Sbjct: 72 GGLPRSASSKFYSSPIKTNLIRFLTLEDSFLLENRATLRAMAEFGAILLYFYICDRTSLI 131
Query: 138 GESAKNYSRDMFLFLYFLLIIVAAMTSFKVHQDKSSFTGKSILYLNRHQTEEWKGWMQVL 197
G+S KNYSRD+FLFL+ LLIIV+AMTS K H DKS TGKSILYLNRHQTEEWKGWMQVL
Sbjct: 132 GQSQKNYSRDLFLFLFCLLIIVSAMTSLKKHTDKSPITGKSILYLNRHQTEEWKGWMQVL 191
Query: 198 FLMYHYFNAKEIYNAIRVFIAAYVWMTGFGNFSYYYVRKDFSLARFA------------- 244
FLMYHYF A E YNAIRVFIA YVWMTGFGNFSYYY+RKDFSLARF
Sbjct: 192 FLMYHYFAAVEFYNAIRVFIAGYVWMTGFGNFSYYYIRKDFSLARFTQVRSTIFDHHSLF 251
Query: 245 --------------------------QMMWRLNFFVAFCCIVLNNDYTLYYICPMHTLFT 278
QMMWRLNFFVAFCCI+LNNDY LYYICPMHTLFT
Sbjct: 252 SLPCDVLLESTMSFKAQDFYESFYLIQMMWRLNFFVAFCCIILNNDYMLYYICPMHTLFT 311
Query: 279 LMVYGALGILNKYNEIGSVMAIKFVACFLVVILIWEIPGVFEIVWSPFTFLLGYTDPSKP 338
LMVYGALGI ++YNEI SVMA+K +CFLVVIL+WEIPGVFEI WSP FLLGYTDP+KP
Sbjct: 312 LMVYGALGIYSQYNEIASVMALKIASCFLVVILMWEIPGVFEIFWSPLAFLLGYTDPAKP 371
Query: 339 DLPRLHEWHFRSGLDRYIWIVGMIYAYYHPTVEKWMXXXXXXXXXXXXYIKALIVSIALT 398
DLPRLHEWHFRSGLDRYIWI+GMIYAY+HPTVE+WM IK I+ I+
Sbjct: 372 DLPRLHEWHFRSGLDRYIWIIGMIYAYFHPTVERWMEKLEECDAKRRMSIKTSIIGISSF 431
Query: 399 AGCLWYEYIYKLDKITYNKYHPYTSWIPITVYICLRNFTQEFRCCSLTLFAWLGKITLET 458
AG LWYEYIYKLDK+TYNKYHPYTSWIPITVYICLRN TQ+ R SLTLFAWLGKITLET
Sbjct: 432 AGYLWYEYIYKLDKVTYNKYHPYTSWIPITVYICLRNCTQQLRRFSLTLFAWLGKITLET 491
Query: 459 YISQFHIWLRSKVPNGQPKWLLTIIPNYPMLNFMLTTAIYVAVSHRLFELTNTLKIAFVP 518
YISQFHIWLRS VPNGQPK LL+IIP YPMLNFMLTTAIYV VS RLFELTNTLK F+P
Sbjct: 492 YISQFHIWLRSSVPNGQPKLLLSIIPEYPMLNFMLTTAIYVLVSVRLFELTNTLKSVFIP 551
Query: 519 SRDNKRLSYNFVAGIAIS 536
++D+KRL +N +A AIS
Sbjct: 552 TKDDKRLLHNVIAMAAIS 569
>AT3G06550.2 | chr3:2039408-2042664 REVERSE LENGTH=569
Length = 568
Score = 737 bits (1903), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/536 (66%), Positives = 429/536 (80%), Gaps = 3/536 (0%)
Query: 17 TSLTPGQVSALLGFLWVFTAWAYAEVLYYRKNAASIKA-HSDVNLAVMDSSSNKGEDQVM 75
+ +TPG +S + G + V AW Y+E L+Y K + S K HSDVNL + K +D+ +
Sbjct: 5 SPVTPGLMSVVFGIVPVIVAWLYSEYLHYAKYSVSAKTRHSDVNLVEIAKDFVKEDDKAL 64
Query: 76 LLEEG--VQAPVQKPVYASLTSQMFRLFLLDQALILENRLTLRAISEFGGHLLYFYICDR 133
L+E+G +Q+ + + S + R LLD++ ++ENRLTLRAI EF ++YFYICDR
Sbjct: 65 LIEDGGGLQSASPRAKGPTTHSPLIRFVLLDESFLVENRLTLRAIIEFAVLMVYFYICDR 124
Query: 134 TNLLGESAKNYSRDMFLFLYFLLIIVAAMTSFKVHQDKSSFTGKSILYLNRHQTEEWKGW 193
T++ S K+Y+RD+FLFLYFLLIIV+A+TSF +H DKS F+GK+I+YLNRHQTEEWKGW
Sbjct: 125 TDVFNSSKKSYNRDLFLFLYFLLIIVSAITSFTIHTDKSPFSGKAIMYLNRHQTEEWKGW 184
Query: 194 MQVLFLMYHYFNAKEIYNAIRVFIAAYVWMTGFGNFSYYYVRKDFSLARFAQMMWRLNFF 253
MQVLFLMYHYF A E YNAIRVFIA YVWMTGFGNFSYYY+RKDFSLARFAQMMWRLNF
Sbjct: 185 MQVLFLMYHYFAAAEYYNAIRVFIACYVWMTGFGNFSYYYIRKDFSLARFAQMMWRLNFL 244
Query: 254 VAFCCIVLNNDYTLYYICPMHTLFTLMVYGALGILNKYNEIGSVMAIKFVACFLVVILIW 313
V F CIVLNN Y LYYICPMHTLFTLMVYGALGI++KYNE+GSV+A KF ACF+VVI++W
Sbjct: 245 VIFSCIVLNNSYMLYYICPMHTLFTLMVYGALGIMSKYNEMGSVIAAKFFACFVVVIIVW 304
Query: 314 EIPGVFEIVWSPFTFLLGYTDPSKPDLPRLHEWHFRSGLDRYIWIVGMIYAYYHPTVEKW 373
EIPGVFE +WSPFT L+GY DP+KP LP LHEWHFRSGLDRYIWI+GM+YAYYHPTVE W
Sbjct: 305 EIPGVFEWIWSPFTLLMGYNDPAKPQLPLLHEWHFRSGLDRYIWIIGMLYAYYHPTVESW 364
Query: 374 MXXXXXXXXXXXXYIKALIVSIALTAGCLWYEYIYKLDKITYNKYHPYTSWIPITVYICL 433
M IK + IALT G WYEYIYK+DK+TYNKYHPYTSWIPITVYICL
Sbjct: 365 MDKLEEAEMKFRVAIKTSVALIALTVGYFWYEYIYKMDKLTYNKYHPYTSWIPITVYICL 424
Query: 434 RNFTQEFRCCSLTLFAWLGKITLETYISQFHIWLRSKVPNGQPKWLLTIIPNYPMLNFML 493
RN TQ FR SLTL AWLGKITLETYISQFHIWLRS VP+GQPK LL+++P+YP+LNFML
Sbjct: 425 RNITQSFRGYSLTLLAWLGKITLETYISQFHIWLRSGVPDGQPKLLLSLVPDYPLLNFML 484
Query: 494 TTAIYVAVSHRLFELTNTLKIAFVPSRDNKRLSYNFVAGIAISVALYSLSFLIVGV 549
TT+IYVA+S+RLFELTNTLK AF+P++D+KRL YN ++ + I LY SF+++ +
Sbjct: 485 TTSIYVAISYRLFELTNTLKTAFIPTKDDKRLVYNTISALIICTCLYFFSFILITI 540
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.329 0.141 0.456
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 11,254,646
Number of extensions: 452303
Number of successful extensions: 1164
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 1157
Number of HSP's successfully gapped: 4
Length of query: 552
Length of database: 11,106,569
Length adjustment: 104
Effective length of query: 448
Effective length of database: 8,255,305
Effective search space: 3698376640
Effective search space used: 3698376640
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 114 (48.5 bits)