BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os03g0307100 Os03g0307100|AK102205
         (938 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G47390.1  | chr2:19442278-19446253 REVERSE LENGTH=962         1393   0.0  
AT4G14570.1  | chr4:8362586-8366525 FORWARD LENGTH=765             50   4e-06

>AT2G47390.1 | chr2:19442278-19446253 REVERSE LENGTH=962
          Length = 961

 Score = 1393 bits (3606), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 662/826 (80%), Positives = 733/826 (88%), Gaps = 3/826 (0%)

Query: 78  AQEDDDLSSAMMGYRLPPKEIQDIVDAPPLPVLSFSPSKDKILFLKRRALPPLSDLAKPE 137
           A EDD+L+    GYRLPP EI+DIVDAPP+P LSFSP +DKILFLKRRALPPL+DLA+PE
Sbjct: 98  ATEDDELAIGT-GYRLPPPEIRDIVDAPPVPALSFSPHRDKILFLKRRALPPLADLARPE 156

Query: 138 EKLAGVRIDGYSNTRSRMSFYTGIGIHKLMDDGTLGPEKVVHGYPEGARINFVTWSQDGR 197
           EKLAGVRIDGY NTRSRMSFYTG+GIH+L+ DGTL PEK + G P+G +INFVTWS DG+
Sbjct: 157 EKLAGVRIDGYCNTRSRMSFYTGLGIHQLLPDGTLSPEKEITGIPDGGKINFVTWSNDGK 216

Query: 198 HLSFSVRVDEEDNTSGKLRLWIADVESGEARPLFKSPEIYLNAIFDSFVWVNNSTLLVCT 257
           HL+FS+RVDE  N+S K  +W+ADVE+G ARPLF S +I+LNAIF+SFVW++NSTLLV T
Sbjct: 217 HLAFSIRVDENGNSS-KPVVWVADVETGVARPLFNSQDIFLNAIFESFVWIDNSTLLVST 275

Query: 258 IPLSRGAPPQKPSVPSGPKIQSNETSNVVQVRTFQDLLKDEYDADLFDYYATSQLVLASF 317
           IP SRG PP+KP VPSGPK  SNET  VVQVRTFQDLLKDEYDADLFDYYA+SQLVLAS 
Sbjct: 276 IPSSRGEPPKKPLVPSGPKTLSNETKTVVQVRTFQDLLKDEYDADLFDYYASSQLVLASL 335

Query: 318 DGTVKPIGPPAVYTSIDPSPDDKYLMISSIHRPYSYIVPCGRFPKKVELWTVDGEFIREL 377
           DGTVK +G PAVYTS+DPS D KYL++SS+HRPYS+IVPCGRFPKKVE+WT DG F+R+L
Sbjct: 336 DGTVKEVGVPAVYTSLDPSTDHKYLLVSSLHRPYSFIVPCGRFPKKVEVWTTDGRFVRQL 395

Query: 378 CDLPLAEDIPIATSSVRKGKRSIYWRPDKPAMLYWVETQDGGDAKVEVSPRDIVYMENAE 437
           CDLPLAEDIPIA++SVRKG RSI WR DKP+ LYW ETQDGGDAK+EVSPRDIVYM++AE
Sbjct: 396 CDLPLAEDIPIASNSVRKGMRSINWRADKPSTLYWAETQDGGDAKMEVSPRDIVYMQSAE 455

Query: 438 PINGEQPEILHKLDLRYAGTSWCDESLALVYESWYKTRKTRTWVISPDKKDVSPRILFDR 497
           P+ GE+PE+LHKLDLRY G SWCD++LALVYESWYKTR+TRTWVISP   DVSPRILFDR
Sbjct: 456 PLAGEEPEVLHKLDLRYGGISWCDDTLALVYESWYKTRRTRTWVISPGSNDVSPRILFDR 515

Query: 498 SSEDVYSDPGSPMLRRTAMGTYVIAKVKKQ-DENTYILLNGMGATPEGNVPFLDLFDINT 556
           SSEDVYSDPGS MLRRT  GTYVIAK+KK+ DE TY+LLNG GATP+GNVPFLDLFDINT
Sbjct: 516 SSEDVYSDPGSTMLRRTDAGTYVIAKIKKENDEGTYVLLNGSGATPQGNVPFLDLFDINT 575

Query: 557 GSKERIWQSDKEKYYETVVALMSDKTDGELPLEKLKILTSKESKTENTQYYLQIWPEKKQ 616
           G+KERIW+SDKEKY+ETVVALMSD+ +G+L +E+LKILTSKESKTENTQY LQ+WP++K 
Sbjct: 576 GNKERIWESDKEKYFETVVALMSDQKEGDLKMEELKILTSKESKTENTQYSLQLWPDRKV 635

Query: 617 VQITDFPHPYPQLASLYKEMIRYQRKDGVQLTATLYLPPGYDPSQDGPLPCLVWSYPGEF 676
            QIT+FPHPYPQLASL KEMIRYQRKDGVQLTATLYLPPGYDPS+DGPLPCL WSYPGEF
Sbjct: 636 QQITNFPHPYPQLASLQKEMIRYQRKDGVQLTATLYLPPGYDPSKDGPLPCLFWSYPGEF 695

Query: 677 KSKDAAGQVRGSPNEFPGIGATSPLLWLARGFAILSGPTIPIIGEGDEEANDRYVEQLVT 736
           KSKDAAGQVRGSPNEF GIG+TS LLWLAR FAILSGPTIPIIGEGDEEANDRYVEQLV 
Sbjct: 696 KSKDAAGQVRGSPNEFAGIGSTSALLWLARRFAILSGPTIPIIGEGDEEANDRYVEQLVA 755

Query: 737 SXXXXXXXXXXXXXXHPDKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTPF 796
           S                 KIAVGGHSYGAFMTANLLAHAPHLF CGIARSGAYNRTLTPF
Sbjct: 756 SAEAAVEEVVRRGVADRSKIAVGGHSYGAFMTANLLAHAPHLFACGIARSGAYNRTLTPF 815

Query: 797 GFQNEDRTLWEATNTYVEMSPFMSANKIKKPILLIHGEQDNNSGTLTMQSDRFFNALKGH 856
           GFQNEDRTLWEATN YVEMSPFMSANKIKKPILLIHGE+DNN GTLTMQSDRFFNALKGH
Sbjct: 816 GFQNEDRTLWEATNVYVEMSPFMSANKIKKPILLIHGEEDNNPGTLTMQSDRFFNALKGH 875

Query: 857 GALSRLVILPFESHGYSARESIMHVLWETDRWLQKYCLSGSSKTDS 902
           GAL RLV+LP ESHGYSARESIMHVLWETDRWLQKYC+  +S  D+
Sbjct: 876 GALCRLVVLPHESHGYSARESIMHVLWETDRWLQKYCVPNTSDADT 921



>AT4G14570.1 | chr4:8362586-8366525 FORWARD LENGTH=765
          Length = 764

 Score = 50.4 bits (119), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 37/156 (23%), Positives = 63/156 (40%), Gaps = 17/156 (10%)

Query: 753 PDKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRT-------------LTPFGFQ 799
           P +I V G S+G F+T +L+  AP  F    AR+   N                  +G Q
Sbjct: 609 PSRITVLGGSHGGFLTTHLIGQAPDKFVAAAARNPVCNMASMVGITDIPDWCFFEAYGDQ 668

Query: 800 NE--DRTLWEATNTYVEMSPFMSANKIKKPILLIHGEQDNNSGTLTMQSDRFFNALKGHG 857
           +   +    E  + + +MSP    +K+K P L + G +D           ++  ALK  G
Sbjct: 669 SHYTEAPSAEDLSRFHQMSPISHISKVKTPTLFLLGTKDLR--VPISNGFQYVRALKEKG 726

Query: 858 ALSRLVILPFESHGYSARESIMHVLWETDRWLQKYC 893
              ++++ P ++H     ++          W  KYC
Sbjct: 727 VEVKVLVFPNDNHPLDRPQTDYESFLNIAVWFNKYC 762



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.317    0.135    0.409 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 20,542,239
Number of extensions: 946204
Number of successful extensions: 2047
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 2047
Number of HSP's successfully gapped: 2
Length of query: 938
Length of database: 11,106,569
Length adjustment: 108
Effective length of query: 830
Effective length of database: 8,145,641
Effective search space: 6760882030
Effective search space used: 6760882030
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 116 (49.3 bits)