BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0306400 Os03g0306400|AY183658
(948 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G26860.1 | chr5:9451183-9456631 FORWARD LENGTH=941 988 0.0
AT3G05780.1 | chr3:1714941-1719608 REVERSE LENGTH=925 978 0.0
AT3G05790.1 | chr3:1720154-1725182 REVERSE LENGTH=943 967 0.0
AT5G47040.1 | chr5:19093356-19098678 REVERSE LENGTH=889 329 6e-90
>AT5G26860.1 | chr5:9451183-9456631 FORWARD LENGTH=941
Length = 940
Score = 988 bits (2553), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 499/715 (69%), Positives = 567/715 (79%), Gaps = 66/715 (9%)
Query: 231 VDHLKVSKRLMLTLELVKRELEITKLQQSIAKAIEEKVTGEQRRYLLNEQLKAIKKELGL 290
++ L V KRL LTLEL+K+E+EI+K+Q++IAKAIEEK++GEQRRYLLNEQLKAIKKELG+
Sbjct: 289 LEELDVHKRLRLTLELMKKEMEISKIQETIAKAIEEKISGEQRRYLLNEQLKAIKKELGV 348
Query: 291 ETDDKTALSEKFRKRIESRKEKCPSHILQVIEEELTKLQLLEASSSEFSVTSNYLDWLTV 350
ETDDK+ALS KF++RIE KEK P+H+LQVIEEELTKLQLLEASSSEF+VT NYLDWLT+
Sbjct: 349 ETDDKSALSAKFKERIEPNKEKIPAHVLQVIEEELTKLQLLEASSSEFNVTRNYLDWLTI 408
Query: 351 LPWGDYSDENFDVLRAQRILDEDHYGLTDVKERILEFIAVGKLRGSSQGKIICLCGPPGV 410
LPWG+YS+ENFDV RAQ ILDEDHYGL+DVKERILEFIAVG+LRG+SQGKIICL GPPGV
Sbjct: 409 LPWGNYSNENFDVARAQTILDEDHYGLSDVKERILEFIAVGRLRGTSQGKIICLSGPPGV 468
Query: 411 GKTSIGRSVARALNRKFYRFSVGGLSDIAEIKGHRRTYVGAMPGKMVQCLKSVGTSNPLV 470
GKTSIGRS+ARALNRKF+RFSVGGL+D+AEIKGHRRTYVGAMPGKMVQCLKSVGT+NPLV
Sbjct: 469 GKTSIGRSIARALNRKFFRFSVGGLADVAEIKGHRRTYVGAMPGKMVQCLKSVGTANPLV 528
Query: 471 LIDEIDKLGRGYSGDPASALLELLDPEQNANFLDHYLDVPIDLSKVLFVCTANVIEMIPG 530
LIDEIDKLGRG++GDPASALLELLDPEQNANFLDHYLDV IDLSKVLFVCTANVI+MIP
Sbjct: 529 LIDEIDKLGRGHAGDPASALLELLDPEQNANFLDHYLDVTIDLSKVLFVCTANVIDMIPN 588
Query: 531 PLLDRMEIITIAGYITDEKMHIARDYLEKNTREACGIMPEQVEVTDSALLALIENYCREA 590
PLLDRME+I+IAGYITDEK+HIARDYLEK R CG+ PEQVEV+D+ALL+LIENYCREA
Sbjct: 589 PLLDRMEVISIAGYITDEKVHIARDYLEKTARGDCGVKPEQVEVSDAALLSLIENYCREA 648
Query: 591 GVRNLQKQIEKVYRKIALQLVRQG-VSNEPAREITLVEPSEQPTGVSIATEVENKSQRDS 649
GVRNLQKQIEK+YRKIAL+LVR+G V EPA +P E + +EN + +
Sbjct: 649 GVRNLQKQIEKIYRKIALKLVREGAVPEEPA---VASDPEEAEIVADVGESIENHTVEE- 704
Query: 650 LAEDVSVHVIPTDFSCEKINVVSLTTKSEVDHYEHPKGVSKETSADDKATPTNTSGKMEA 709
N VS SA++ K EA
Sbjct: 705 -------------------NTVS--------------------SAEEP--------KEEA 717
Query: 710 NEHTEEVMEALVDEALVDKTVEKVVVDASNLDNFVGKAVFQPERIYDQTPVGVVMGLAWN 769
+ ++DE+ + V K V A E++Y+QTPVGVVMGLAW
Sbjct: 718 QTEKIAIETVMIDESNLADYVGKPVFHA--------------EKLYEQTPVGVVMGLAWT 763
Query: 770 AMGGSTLYIETAKVEDGEKKGALVVTGQLGDVMKESAQIAHTICRSILHEKEPNNTFFTK 829
+MGGSTLYIET VE+GE KG L +TGQLGDVMKESAQIAHT+ R I+ EKEP N FF
Sbjct: 764 SMGGSTLYIETTVVEEGEGKGGLNITGQLGDVMKESAQIAHTVARKIMLEKEPENQFFAN 823
Query: 830 SKLHLHVPAGATPKDGPSAGCTMVTSMLSLAMGKLVKKDLAMTGEVTLTGRILPIGGVKE 889
SKLHLHVPAGATPKDGPSAGCTM+TS+LSLA K V+KDLAMTGEVTLTGRILPIGGVKE
Sbjct: 824 SKLHLHVPAGATPKDGPSAGCTMITSLLSLATKKPVRKDLAMTGEVTLTGRILPIGGVKE 883
Query: 890 KTIAARRSGIKTIIFPAANRRDFDELAPNVKEGLEVHFVDKYSEIYDLAFPSDSQ 944
KTIAARRS IKTIIFP ANRRDFDELA NVKEGL VHFVD Y +I++LAF D Q
Sbjct: 884 KTIAARRSQIKTIIFPEANRRDFDELAENVKEGLNVHFVDDYGKIFELAFGYDKQ 938
Score = 147 bits (371), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 76/135 (56%), Positives = 99/135 (73%), Gaps = 2/135 (1%)
Query: 101 VAPAIIRPEDCHTVIALPLPHQPLFPGFFMAMSVKDPKLLKALVENHKRSFPYAGAFLVK 160
+ P RPEDC TV+ALP+PH+PLFPGF+M + VKDPK+L AL E+ +R PYAGAFL+K
Sbjct: 87 IVPTNPRPEDCLTVLALPVPHRPLFPGFYMPIYVKDPKVLAALQESRRRQAPYAGAFLLK 146
Query: 161 NEEDTDSNTVTRSDPKKSIXXXXXXXXXXXXXXIGTLAKITSIQGDQVLLLGHCRLRITE 220
++ DS++ T ++ K+I +GTLA+I+SIQGDQV+L+GH RLRI E
Sbjct: 147 DDPSADSSSSTDAE--KNINELKGKELLNRLHEVGTLAQISSIQGDQVILVGHRRLRIKE 204
Query: 221 MVEEDPLTVKVDHLK 235
MV E+PLTVKVDHLK
Sbjct: 205 MVSEEPLTVKVDHLK 219
>AT3G05780.1 | chr3:1714941-1719608 REVERSE LENGTH=925
Length = 924
Score = 978 bits (2528), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 508/877 (57%), Positives = 621/877 (70%), Gaps = 103/877 (11%)
Query: 109 EDCHTVIALPLPHQPLFPGFFMAMSVKDPKLLKALVENHKRSFPYAGAFLVKNEEDTDS- 167
+D TVIALPLPH+PL PGF+M + VKDPK+L AL E+ ++ PY GAFL+K+ TDS
Sbjct: 107 DDSLTVIALPLPHKPLIPGFYMPIHVKDPKVLAALQESTRQQSPYVGAFLLKDCASTDSS 166
Query: 168 -------NTVTRSDPKKSIXXXXXXXXXXXXXXIGTLAKITSIQGDQVLLLGHCRLRITE 220
N V + K +GTLA+I+SIQG+QV+L+G RL I E
Sbjct: 167 SRSETEDNVVEKFKVKGKPKKKRRKELLNRIHQVGTLAQISSIQGEQVILVGRRRLIIEE 226
Query: 221 MVEEDPLTVKVDHLK-------------------VSKRLMLTLELVKRELEITKLQQSIA 261
MV EDPLTV+VDHLK + R +L + R+ +I
Sbjct: 227 MVSEDPLTVRVDHLKDKPYDKDNAVIKASYVEVISTLREVLKTNSLWRDQDIGDFSYQHL 286
Query: 262 KAIEEKVTGEQRRY---LLNE---------QLKAIKKELGL----ETDDKTALSEKFRKR 305
++G + +L E L+ +KK++ + ETDD ++LS K R R
Sbjct: 287 ADFGAGISGANKHKNQGVLTELDVHKRLELTLELVKKQVEINKIKETDDGSSLSAKIRVR 346
Query: 306 IESRKEKCPSHILQVIEEELTKLQLLEASSSEFSVTSNYLDWLTVLPWGDYSDENFDVLR 365
I+++++K P H+++V+EEE TKL++LE + S+F +T NYL WLTVLPWG++S ENFDVLR
Sbjct: 347 IDTKRDKIPKHVIKVMEEEFTKLEMLEENYSDFDLTYNYLHWLTVLPWGNFSYENFDVLR 406
Query: 366 AQRILDEDHYGLTDVKERILEFIAVGKLRGSSQGKIICLCGPPGVGKTSIGRSVARALNR 425
A++ILDEDHYGL+DVKERILEFIAVG+LRG+SQGKIICL GPPGVGKTSIGRS+ARAL+R
Sbjct: 407 AKKILDEDHYGLSDVKERILEFIAVGRLRGTSQGKIICLSGPPGVGKTSIGRSIARALDR 466
Query: 426 KFYRFSVGGLSDIAEIKGHRRTYVGAMPGKMVQCLKSVGTSNPLVLIDEIDKLGRGYSGD 485
KF+RFSVGGLSD+AEIKGH +TYVGAMPGKMVQCLKSVGT+NPL+L DEIDKLGR ++GD
Sbjct: 467 KFFRFSVGGLSDVAEIKGHCQTYVGAMPGKMVQCLKSVGTANPLILFDEIDKLGRCHTGD 526
Query: 486 PASALLELLDPEQNANFLDHYLDVPIDLSKVLFVCTANVIEMIPGPLLDRMEIITIAGYI 545
PASALLE++DPEQNA FLDH+L+V IDLSKVLFVCTANVIEMIPGPLLDRME+I ++GY+
Sbjct: 527 PASALLEVMDPEQNAKFLDHFLNVTIDLSKVLFVCTANVIEMIPGPLLDRMEVIDLSGYV 586
Query: 546 TDEKMHIARDYLEKNTREACGIMPEQVEVTDSALLALIENYCREAGVRNLQKQIEKVYRK 605
TDEKMHIARDYL K T CGI PE V+++D+ALL+LIENYCREAGVRNLQKQIEK+YRK
Sbjct: 587 TDEKMHIARDYLVKKTCRDCGIKPEHVDLSDAALLSLIENYCREAGVRNLQKQIEKIYRK 646
Query: 606 IALQLVRQGVSNEPAREITLVEPSEQPTGVSIATEVENKSQRDSLAEDVSVHVIPTDFSC 665
+AL+LVRQG +++ +V + SLA+ TD
Sbjct: 647 VALELVRQG---------------------AVSFDVTDTKDTKSLAK--------TDSEV 677
Query: 666 EKINVVSLTTKSEVDHYEHPKGVSKETSADDKATPTNTSGKMEANEHTEEVMEALVDEAL 725
+++ V + + + + D + T SG L
Sbjct: 678 KRMKVADIMK------------ILESATGDSTESKTKQSG-------------------L 706
Query: 726 VDKTVEKVVVDASNLDNFVGKAVFQPERIYDQTPVGVVMGLAWNAMGGSTLYIETAKVED 785
V KT EKV++D SNL ++VGK VFQ E+IY+QTPVGVVMGLAW +MGGSTLYIET VE+
Sbjct: 707 VAKTFEKVMIDESNLADYVGKPVFQEEKIYEQTPVGVVMGLAWTSMGGSTLYIETTFVEE 766
Query: 786 GEKKGALVVTGQLGDVMKESAQIAHTICRSILHEKEPNNTFFTKSKLHLHVPAGATPKDG 845
G KG L +TGQLGDVMKESAQIAHT+ R I+ EKEP N FF SKLHLHVP GATPKDG
Sbjct: 767 GLGKGGLHITGQLGDVMKESAQIAHTVARRIMFEKEPENLFFANSKLHLHVPEGATPKDG 826
Query: 846 PSAGCTMVTSMLSLAMGKLVKKDLAMTGEVTLTGRILPIGGVKEKTIAARRSGIKTIIFP 905
PSAGCTM+TS LSLAM KLV+KDLAMTGEVTLTGRILPIGGVKEKTIAARRS IKTIIFP
Sbjct: 827 PSAGCTMITSFLSLAMKKLVRKDLAMTGEVTLTGRILPIGGVKEKTIAARRSQIKTIIFP 886
Query: 906 AANRRDFDELAPNVKEGLEVHFVDKYSEIYDLAFPSD 942
ANRRDF+ELA N+KEGL+VHFVD+Y +I+DLAF D
Sbjct: 887 EANRRDFEELAENMKEGLDVHFVDEYEKIFDLAFNYD 923
>AT3G05790.1 | chr3:1720154-1725182 REVERSE LENGTH=943
Length = 942
Score = 967 bits (2499), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 488/713 (68%), Positives = 563/713 (78%), Gaps = 53/713 (7%)
Query: 231 VDHLKVSKRLMLTLELVKRELEITKLQQSIAKAIEEKVTGEQRRYLLNEQLKAIKKELGL 290
++ L V KRL LTLELVK+E+EI K+Q+SIAKA+EEK +G++RR +L EQ+ AIKKELG
Sbjct: 281 LEELDVHKRLELTLELVKKEVEINKIQESIAKAVEEKFSGDRRRIILKEQINAIKKELGG 340
Query: 291 ETDDKTALSEKFRKRIESRKEKCPSHILQVIEEELTKLQLLEASSSEFSVTSNYLDWLTV 350
ETD K+ALSEKFR RI+ K+K P H+L+VIEEEL KLQLLE SSSEF VT NYLDWLTV
Sbjct: 341 ETDSKSALSEKFRGRIDPIKDKIPGHVLKVIEEELKKLQLLETSSSEFDVTCNYLDWLTV 400
Query: 351 LPWGDYSDENFDVLRAQRILDEDHYGLTDVKERILEFIAVGKLRGSSQGKIICLCGPPGV 410
LPWG++SDENF+VLRA++ILDEDHYGL+DVKERILEFIAVG LRG+SQGKIICL GP GV
Sbjct: 401 LPWGNFSDENFNVLRAEKILDEDHYGLSDVKERILEFIAVGGLRGTSQGKIICLSGPTGV 460
Query: 411 GKTSIGRSVARALNRKFYRFSVGGLSDIAEIKGHRRTYVGAMPGKMVQCLKSVGTSNPLV 470
GKTSIGRS+ARAL+RKF+RFSVGGLSD+AEIKGHRRTY+GAMPGKMVQCLK+VGT NPLV
Sbjct: 461 GKTSIGRSIARALDRKFFRFSVGGLSDVAEIKGHRRTYIGAMPGKMVQCLKNVGTENPLV 520
Query: 471 LIDEIDKLG-RGYSGDPASALLELLDPEQNANFLDHYLDVPIDLSKVLFVCTANVIEMIP 529
LIDEIDKLG RG+ GDPASA+LELLDPEQNANFLDHYLDVPIDLSKVLFVCTANV + IP
Sbjct: 521 LIDEIDKLGVRGHHGDPASAMLELLDPEQNANFLDHYLDVPIDLSKVLFVCTANVTDTIP 580
Query: 530 GPLLDRMEIITIAGYITDEKMHIARDYLEKNTREACGIMPEQVEVTDSALLALIENYCRE 589
GPLLDRME+IT++GYITDEKMHIARDYLEK R CGI PEQV+V+D+A L+LIE+YCRE
Sbjct: 581 GPLLDRMEVITLSGYITDEKMHIARDYLEKTARRDCGIKPEQVDVSDAAFLSLIEHYCRE 640
Query: 590 AGVRNLQKQIEKVYRKIALQLVRQGVSNEPAREITLVEPSEQPTGVSIATEVENKSQRDS 649
AGVRNLQKQIEK++RKIAL+LVR+ S E R + T+ E + S
Sbjct: 641 AGVRNLQKQIEKIFRKIALKLVRKAASTEVPR-----------ISDDVTTDTE---ETKS 686
Query: 650 LAEDVSVHVIPTDFSCEKINVVSLTTKSEVDHYEHPKGVSKETSADDKATPTNTSGKMEA 709
LA+ TD S ETSA+ T+ +
Sbjct: 687 LAK--------TDLE------------------------SPETSAEGSTVLTDELATGDP 714
Query: 710 NEHTEEVMEALVDEALVDKTVEKVVVDASNLDNFVGKAVFQPERIYDQTPVGVVMGLAWN 769
E T E V +TVEK ++D SNL ++VGK VFQ E+IY+QTPVGVVMGLAW
Sbjct: 715 TESTTE------QSGEVAETVEKYMIDESNLSDYVGKPVFQEEKIYEQTPVGVVMGLAWT 768
Query: 770 AMGGSTLYIETAKVEDGEKKGALVVTGQLGDVMKESAQIAHTICRSILHEKEPNNTFFTK 829
+MGGSTLYIET VE+GE KG L +TG+LGDVMKESA+IAHT+ R I+ EKEP N F
Sbjct: 769 SMGGSTLYIETTFVEEGEGKGGLHITGRLGDVMKESAEIAHTVARRIMLEKEPENKLFAN 828
Query: 830 SKLHLHVPAGATPKDGPSAGCTMVTSMLSLAMGKLVKKDLAMTGEVTLTGRILPIGGVKE 889
SKLHLHVPAGATPKDGPSAGCTM+TS+LSLA+ K V+KDLAMTGEVTLTGRIL IGGVKE
Sbjct: 829 SKLHLHVPAGATPKDGPSAGCTMITSLLSLALKKPVRKDLAMTGEVTLTGRILAIGGVKE 888
Query: 890 KTIAARRSGIKTIIFPAANRRDFDELAPNVKEGLEVHFVDKYSEIYDLAFPSD 942
KTIAARRS +K IIFP ANRRDFDELA NVKEGLEVHFVD+Y +I++LAF D
Sbjct: 889 KTIAARRSQVKVIIFPEANRRDFDELARNVKEGLEVHFVDEYEQIFELAFGYD 941
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 68/128 (53%), Positives = 93/128 (72%), Gaps = 4/128 (3%)
Query: 109 EDCHTVIALPLPHQPLFPGFFMAMSVKDPKLLKALVENHKRSFPYAGAFLVKNEEDTDSN 168
+DC TVIALPLPH+PL PGF+M + VKDPK+L AL E+ ++ PYAGAFL+K++ +DS+
Sbjct: 74 DDCLTVIALPLPHKPLIPGFYMPIYVKDPKVLAALQESRRQQAPYAGAFLLKDDASSDSS 133
Query: 169 TVTRSDPKKSIXXXXXXXXXXXXXXIGTLAKITSIQGDQVLLLGHCRLRITEMV--EEDP 226
+ + ++ + +GTLA+I+SIQG+QV+L+GH +LRITEMV EDP
Sbjct: 134 SSSETE--NILEKLKGKELINRIHEVGTLAQISSIQGEQVILIGHRQLRITEMVSESEDP 191
Query: 227 LTVKVDHL 234
LTVKVDHL
Sbjct: 192 LTVKVDHL 199
>AT5G47040.1 | chr5:19093356-19098678 REVERSE LENGTH=889
Length = 888
Score = 329 bits (843), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 169/379 (44%), Positives = 255/379 (67%), Gaps = 5/379 (1%)
Query: 220 EMVEEDPLTVKVDHLKVSKRLMLTLELVKRELEITKLQQSIAKAIEEKVTGEQRRYLLNE 279
EM E+ L++ +D + + RL ELV R L+ ++ + I + +E +++ Q+ YLL +
Sbjct: 225 EMSFEEQLSM-LDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEYLLRQ 283
Query: 280 QLKAIKKELGLETDDKTALSEKFRKRIESRKEKCPSHILQVIEEELTKLQLLEASSSEFS 339
Q++AIK+ELG DD+ ++ RK + PS+I + + EL +L+ ++ ++
Sbjct: 284 QMRAIKEELGDNDDDEDDVAALERK---MQAAGMPSNIWKHAQRELRRLKKMQPQQPGYN 340
Query: 340 VTSNYLDWLTVLPWGDYSDEN-FDVLRAQRILDEDHYGLTDVKERILEFIAVGKLRGSSQ 398
+ YL+ L LPW S+E+ D+ A+ LD DHYGL VK+RI+E++AV KL+ ++
Sbjct: 341 SSRVYLELLADLPWDKASEEHELDLKAAKERLDSDHYGLAKVKQRIIEYLAVRKLKPDAR 400
Query: 399 GKIICLCGPPGVGKTSIGRSVARALNRKFYRFSVGGLSDIAEIKGHRRTYVGAMPGKMVQ 458
G ++C GPPGVGKTS+ S+A AL RKF R S+GG+ D A+I+GHRRTY+G+MPG+++
Sbjct: 401 GPVLCFVGPPGVGKTSLASSIAAALGRKFVRLSLGGVKDEADIRGHRRTYIGSMPGRLID 460
Query: 459 CLKSVGTSNPLVLIDEIDKLGRGYSGDPASALLELLDPEQNANFLDHYLDVPIDLSKVLF 518
LK VG NP++L+DEIDK G GDPASALLE+LDPEQN +F DHYL+VP DLSKV+F
Sbjct: 461 GLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKSFNDHYLNVPYDLSKVVF 520
Query: 519 VCTANVIEMIPGPLLDRMEIITIAGYITDEKMHIARDYLEKNTREACGIMPEQVEVTDSA 578
V TAN ++ IP PLLDRME+I + GY +EK+ IA +L + G+ E +++ ++
Sbjct: 521 VATANRVQPIPPPLLDRMELIELPGYTQEEKLKIAMRHLIPRVLDQHGLSSEFLKIPEAM 580
Query: 579 LLALIENYCREAGVRNLQK 597
+ +I+ Y REAGVR+L++
Sbjct: 581 VKNIIQRYTREAGVRSLER 599
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 95/252 (37%), Positives = 139/252 (55%), Gaps = 12/252 (4%)
Query: 697 KATPTNTSGKM-EANEHTEEVMEALVDEALVDKTVEK---VVVDASNLDNFVGKAVFQPE 752
K T +G+M E E EV+ V++ + T + +VVD + L+ +G F
Sbjct: 627 KLTSPLLNGRMAEGGEVEMEVIPMGVNDHEIGGTFQSPSALVVDETMLEKILGPPRFDDS 686
Query: 753 RIYDQTP-VGVVMGLAWNAMGGSTLYIETAKVEDGEKKGALVVTGQLGDVMKESAQIAHT 811
D+ GV +GL W GG ++E + KG + +TGQLGDV+KESAQ+A T
Sbjct: 687 EAADRVASAGVSVGLVWTTFGGEVQFVEATSMVG---KGEMHLTGQLGDVIKESAQLALT 743
Query: 812 ICRSILHEKE----PNNTFFTKSKLHLHVPAGATPKDGPSAGCTMVTSMLSLAMGKLVKK 867
R+ + + + +H+H PAGA PKDGPSAG T+VT+++SL K V+
Sbjct: 744 WVRARASDFKLALAGDMNVLDGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSQKRVRA 803
Query: 868 DLAMTGEVTLTGRILPIGGVKEKTIAARRSGIKTIIFPAANRRDFDELAPNVKEGLEVHF 927
D AMTGE+TL G +LP+GG+K+K +AA R GIK +I P N +D E+ V LEV
Sbjct: 804 DTAMTGEMTLRGLVLPVGGIKDKILAAHRYGIKRVILPQRNSKDLVEVPAAVLSSLEVIL 863
Query: 928 VDKYSEIYDLAF 939
+ ++ + AF
Sbjct: 864 AKRMEDVLENAF 875
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.316 0.134 0.376
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 18,223,920
Number of extensions: 748134
Number of successful extensions: 2902
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 2909
Number of HSP's successfully gapped: 12
Length of query: 948
Length of database: 11,106,569
Length adjustment: 108
Effective length of query: 840
Effective length of database: 8,145,641
Effective search space: 6842338440
Effective search space used: 6842338440
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 116 (49.3 bits)