BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0301200 Os03g0301200|AK065552
(297 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G16120.1 | chr4:9116591-9119138 REVERSE LENGTH=662 340 4e-94
AT5G49270.1 | chr5:19972021-19974398 REVERSE LENGTH=664 316 1e-86
AT3G16860.1 | chr3:5759643-5762104 REVERSE LENGTH=654 303 5e-83
AT4G27110.1 | chr4:13599236-13601521 REVERSE LENGTH=669 293 7e-80
AT3G20580.1 | chr3:7188063-7190416 REVERSE LENGTH=673 283 6e-77
AT3G29810.1 | chr3:11728212-11730158 FORWARD LENGTH=442 98 6e-21
AT5G15630.1 | chr5:5084842-5086545 FORWARD LENGTH=432 92 3e-19
AT3G02210.1 | chr3:409352-411478 REVERSE LENGTH=453 92 5e-19
AT5G60920.1 | chr5:24511466-24513932 REVERSE LENGTH=457 88 4e-18
AT1G09790.1 | chr1:3168568-3170819 REVERSE LENGTH=455 80 1e-15
>AT4G16120.1 | chr4:9116591-9119138 REVERSE LENGTH=662
Length = 661
Score = 340 bits (873), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 163/268 (60%), Positives = 200/268 (74%), Gaps = 11/268 (4%)
Query: 17 GPEPDKALPTEFPDPSGLDSTTLAIATWQVVCNITTSKGAKPKCCVTFSAYYNDSVIPCN 76
GP P + P++F DPSGL S A A+WQVVCNIT K A P+CCV+FSAY+NDS++PC
Sbjct: 379 GP-PVRVSPSQFVDPSGLPSNRTAFASWQVVCNITQPKDASPRCCVSFSAYFNDSIVPCK 437
Query: 77 TCACGCPSNQRGPTCSTTAQSMLLPPEALLVPFDNRTQKALAWAELKHYNVPKPMPCGDY 136
TCACGC SN+ CS TA S+LLP +ALLVPF+NRT+ +AWA LK VP PMPCGD
Sbjct: 438 TCACGCSSNKAARACSATAPSLLLPQQALLVPFENRTELTVAWAYLKQRPVPNPMPCGDN 497
Query: 137 CGVSINWHISTDYNKGWSARMTLFNWDNVDLANWFAAIVMDKAYDGFEKAYSFNSTSVG- 195
CGVSINWH++TDY GW+AR+T+FNW D +WF A+ M A GFEKAYSFN++++G
Sbjct: 498 CGVSINWHLATDYRGGWTARVTVFNWGETDFVDWFTAVQMKNAAPGFEKAYSFNASTIGI 557
Query: 196 ---KNTIFMQGLEGLNYLVKQTNMSGSDYL----VPGKQQSVLSFTKKLTPGINVVAGDG 248
NTIFM+GL GLNYLV + + G + L +PGKQQSV+SFTKKLTPGINV GDG
Sbjct: 558 NGKNNTIFMEGLPGLNYLVAERD--GENPLKNPRIPGKQQSVMSFTKKLTPGINVPGGDG 615
Query: 249 FPSKVFFNGDECAMPQRIPMSNSGFRTH 276
FPSKVFFNG+EC++P +PM +S R H
Sbjct: 616 FPSKVFFNGEECSLPTILPMRSSQHRKH 643
>AT5G49270.1 | chr5:19972021-19974398 REVERSE LENGTH=664
Length = 663
Score = 316 bits (809), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 149/267 (55%), Positives = 192/267 (71%), Gaps = 11/267 (4%)
Query: 17 GPEPDKALPTEFPDPSGLDSTTLAIATWQVVCNITTSKGAKPKCCVTFSAYYNDSVIPCN 76
GP P + PT +PDPSG+ + + A+WQ+VCNIT +K PKCCV+FSA++NDS+IPCN
Sbjct: 378 GP-PVRVTPTFYPDPSGMPTNKSSFASWQIVCNITQAKTEIPKCCVSFSAFFNDSIIPCN 436
Query: 77 TCACGCPSNQRGPTCSTTAQSMLLPPEALLVPFDNRTQKALAWAELKHYNVPKPMPCGDY 136
TCACGC S R TCS S+L+PP+ALL+PF+NRT LAW LKH +P PMPCGD
Sbjct: 437 TCACGCVSETRR-TCSAETPSLLIPPDALLLPFENRTALTLAWNALKHKTLPNPMPCGDN 495
Query: 137 CGVSINWHISTDYNKGWSARMTLFNWDNVDLANWFAAIVMDK-AYDGFEKAYSFNSTSVG 195
CGVSINWH+++DY GW+ R+T+FNW +D NWF A+ M K A GFEKAYSFN++ +
Sbjct: 496 CGVSINWHMASDYRGGWTVRITIFNWGEIDFPNWFLAVQMKKPALLGFEKAYSFNASLLS 555
Query: 196 -----KNTIFMQGLEGLNYLVKQTNMSG---SDYLVPGKQQSVLSFTKKLTPGINVVAGD 247
NTIFM+GL GL+YLV + + + +PGKQQSV+ F+KKLTPGINV D
Sbjct: 556 VDGGVNNTIFMEGLPGLDYLVAEADEKDPKKKNIRIPGKQQSVIQFSKKLTPGINVAERD 615
Query: 248 GFPSKVFFNGDECAMPQRIPMSNSGFR 274
GFP+KV FNG+EC +P +PM++ G R
Sbjct: 616 GFPAKVIFNGEECLLPDLLPMASGGRR 642
>AT3G16860.1 | chr3:5759643-5762104 REVERSE LENGTH=654
Length = 653
Score = 303 bits (777), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 152/267 (56%), Positives = 194/267 (72%), Gaps = 11/267 (4%)
Query: 17 GPEPDKALPTEFPDPSGLDSTTLAIATWQVVCNITTSKGAKPKCCVTFSAYYNDSVIPCN 76
GP P + ++FPD SGL S A A+WQVVCNIT + PKCCV+FS+Y+NDSVIPC
Sbjct: 372 GP-PLRVSSSQFPDTSGLPSNKSAFASWQVVCNIT--QPTPPKCCVSFSSYFNDSVIPCK 428
Query: 77 TCACG-CPSNQRGPTCSTTAQSMLLPPEALLVPFDNRTQKALAWAELKHYNVPKPMPCGD 135
TCACG C S++ TCSTT+ ++ LP +ALL+PFDNRT+ AWA LK+ VP P+PCGD
Sbjct: 429 TCACGGCSSDRVARTCSTTSPALPLPYQALLIPFDNRTKLTNAWAVLKNRKVPDPLPCGD 488
Query: 136 YCGVSINWHISTDYNKGWSARMTLFNWDNVDLANWFAAIVMDKAYDGFEKAYSFNSTSV- 194
CGVSINWH++TDY GW+AR+TLFNW + D +WF A+ + A GF+KAYSFN + +
Sbjct: 489 NCGVSINWHLATDYRGGWTARVTLFNWGDTDFVDWFTAVELRNAAPGFQKAYSFNGSIIA 548
Query: 195 --GKN-TIFMQGLEGLNYLVKQTNMS--GSDYLVPGKQQSVLSFTKKLTPGINVVAGDGF 249
GKN T+ M+GL GLNYL+ + + D+ +PGKQQSV+SFTKKLTPGI V + DGF
Sbjct: 549 VNGKNTTVLMEGLPGLNYLLAEKDGKNPSEDFRIPGKQQSVISFTKKLTPGIKVGSKDGF 608
Query: 250 PSKVFFNGDECAMPQRIPMSNSGFRTH 276
P+KV FNG EC++P +P SNS R H
Sbjct: 609 PTKVLFNGQECSLPSVLPTSNS-HRKH 634
>AT4G27110.1 | chr4:13599236-13601521 REVERSE LENGTH=669
Length = 668
Score = 293 bits (750), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 142/262 (54%), Positives = 181/262 (69%), Gaps = 6/262 (2%)
Query: 17 GPEPDKALPTEFPDPSGLDSTTLAIATWQVVCNITTSKGAKPKCCVTFSAYYNDSVIPCN 76
GP P + T FPDPSGL +TT AIA+WQV+CNIT K +CCV+FSA+YNDS IPCN
Sbjct: 381 GP-PIRVDATPFPDPSGLQATTYAIASWQVICNITKPKPQAARCCVSFSAFYNDSAIPCN 439
Query: 77 TCACGCPSNQRGPTCSTTAQSMLLPPEALLVPFDNRTQKALAWAELKHYNVPKPMPCGDY 136
TCACGC + TC+ A+ +LLP + LLVPFDNRT KA WA+ KH PK +PC D
Sbjct: 440 TCACGC-KDIDTDTCNANARQLLLPTDTLLVPFDNRTLKAKVWAKQKHMAYPKKLPCPDN 498
Query: 137 CGVSINWHISTDYNKGWSARMTLFNWDNVDLANWFAAIVMDKAYDGFEKAYSFNSTSV-- 194
CG+S+NWH+++DY GWSAR+TLFNW N + +WF A+ + KA G+E YSFN + V
Sbjct: 499 CGISLNWHLNSDYGNGWSARVTLFNWGNNAVEDWFGALDLGKAGLGYENIYSFNGSRVPP 558
Query: 195 GKNTIFMQGLEGLNYLVKQTNMS--GSDYLVPGKQQSVLSFTKKLTPGINVVAGDGFPSK 252
TIF QGL G+NYL+ TN + D +PGK QSV+SF KK +N++ GDGFP +
Sbjct: 559 KNQTIFFQGLPGMNYLIGITNGTNPARDPQIPGKMQSVISFKKKNLGSLNIIGGDGFPKR 618
Query: 253 VFFNGDECAMPQRIPMSNSGFR 274
VFFNG+EC +P+ P +SG R
Sbjct: 619 VFFNGEECELPKYFPKKSSGMR 640
>AT3G20580.1 | chr3:7188063-7190416 REVERSE LENGTH=673
Length = 672
Score = 283 bits (725), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 150/266 (56%), Positives = 188/266 (70%), Gaps = 6/266 (2%)
Query: 13 QDATGPEPDKALPTEFPDPSGLDSTTLAIATWQVVCNITTSKGAKPKCCVTFSAYYNDSV 72
Q GP P + P++FPDPSGL + T AI++WQVVCNIT K +CCV+FSA+YN+S
Sbjct: 387 QYKCGP-PVRVDPSQFPDPSGLLAVTYAISSWQVVCNITKPKAQASRCCVSFSAFYNNSA 445
Query: 73 IPCNTCACGCPSNQRGPTCSTTAQSMLLPPEALLVPFDNRTQKALAWAELKHYNVPKPMP 132
+PCNTCACGC ++ TC+ + +LLPP+ALLVPFDNRT KA AWA+ H VPK +P
Sbjct: 446 VPCNTCACGC-NDIDTDTCNANSNPLLLPPDALLVPFDNRTLKAKAWAKQNHMPVPKKLP 504
Query: 133 CGDYCGVSINWHISTDYNKGWSARMTLFNWDNVDLANWFAAIVMDKAYDGFEKAYSFNST 192
C D CGVSINWH+STDY GW+AR+T+FNW + +WF AI M KA G+E YSFN T
Sbjct: 505 CPDNCGVSINWHVSTDYKNGWTARLTVFNWRDFAFEDWFVAIDMGKAGPGYENVYSFNGT 564
Query: 193 SV--GKNTIFMQGLEGLNYLVKQTNMSG--SDYLVPGKQQSVLSFTKKLTPGINVVAGDG 248
V T+ QGL G+NYLV Q N + D VPGKQQSV+SFTKK G+N+ GDG
Sbjct: 565 RVPPSNRTVIFQGLPGMNYLVGQVNGTNPLRDPPVPGKQQSVISFTKKNIKGLNIPEGDG 624
Query: 249 FPSKVFFNGDECAMPQRIPMSNSGFR 274
FP+K+FFNG+ECA+P+ P +SG R
Sbjct: 625 FPTKLFFNGEECALPKHFPKKSSGHR 650
>AT3G29810.1 | chr3:11728212-11730158 FORWARD LENGTH=442
Length = 441
Score = 97.8 bits (242), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 116/252 (46%), Gaps = 41/252 (16%)
Query: 25 PTEFPDPSGLDST-----TLAIATWQVVCNITTSKGAK-PKCCVTFSAYYNDSVIPCNTC 78
P + PS S T ++ TW + C + K P CCV+ SA+YN++++PC TC
Sbjct: 184 PAKLVKPSRFISADKRRKTQSLLTWNITCTYSQFLARKTPTCCVSLSAFYNETIVPCPTC 243
Query: 79 ACGCPSNQRGPTCSTTAQSMLLPPEALLVPFDNRTQKALAWAELKHYNVPKPMPCGDY-C 137
+CGC ++ + TC + P A +VP L N+ + C + C
Sbjct: 244 SCGCQNSSQAGTC-------VDPKIASVVP------------ALGKNNLEPLLQCTQHMC 284
Query: 138 GVSINWHISTDYNKGWSARMTLFNWD-NVDLANWFAAIVMDKAYDGFEKAYSFNSTSVG- 195
+ ++WH+ T Y + W ++ + N++ N++ + W +V +D K +SFN +
Sbjct: 285 PIRVHWHVKTSYKEYWRVKVAITNFNYNMNYSQW-NLVVQHPNFDNLTKLFSFNYKPLNP 343
Query: 196 ----KNTIFMQGLEGLNYLVKQTNMSGSDYLVPGKQQSVLSFTKKLTPGINVVAGDGFPS 251
+T + G++ N + Q G+ Q++ L FT + G FP
Sbjct: 344 YLNINDTAMLWGIKFYNDFLSQAGPVGNVQSELLFQKNPLEFTFE--------KGWAFPR 395
Query: 252 KVFFNGDECAMP 263
+++FNGD C MP
Sbjct: 396 RIYFNGDNCVMP 407
>AT5G15630.1 | chr5:5084842-5086545 FORWARD LENGTH=432
Length = 431
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 107/252 (42%), Gaps = 36/252 (14%)
Query: 20 PDKALPTEFPDPSGLDSTTLAIATWQVVCNITTSKGAK-PKCCVTFSAYYNDSVIPCNTC 78
P K +P+ + T A+ TW V C + K P CCV+FS++YND++ PC +C
Sbjct: 176 PAKIVPSTVFLTTDKRRKTQALMTWNVTCTYSQFLARKHPSCCVSFSSFYNDTITPCPSC 235
Query: 79 ACGCPSNQRGPTCSTTAQSMLLPPEALLVPFDNRTQKALAWAELKHYNVPKPMPCGDYCG 138
ACGC + + A S +L + L P K N P C
Sbjct: 236 ACGCENKKS----CVKADSKILTKKGLNTP--------------KKDNTPLLQCTHHMCP 277
Query: 139 VSINWHISTDYNKGWSARMTLFNWDNVDLANWFAAIVMDKAYDGFEKAYSFNSTSVG--- 195
V ++WH+ T+Y W ++ + N++ + + + + +SF+ V
Sbjct: 278 VRVHWHVKTNYKDYWRVKIAITNFNYRMNHTLWTLAIQHPNLNNVTQVFSFDYKPVSPYG 337
Query: 196 --KNTIFMQGLEGLNYLVKQTNMSGS--DYLVPGKQQSVLSFTKKLTPGINVVAGDGFPS 251
+T G + N L+ + SG+ ++ K Q +F + G FP
Sbjct: 338 SINDTGMFYGTKFYNDLLMEAGPSGNVQSEVLLQKDQKTFTFKQ----------GWAFPR 387
Query: 252 KVFFNGDECAMP 263
KV+FNGDEC +P
Sbjct: 388 KVYFNGDECMLP 399
>AT3G02210.1 | chr3:409352-411478 REVERSE LENGTH=453
Length = 452
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 110/236 (46%), Gaps = 36/236 (15%)
Query: 38 TLAIATWQVVCNITTSKGAK-PKCCVTFSAYYNDSVIPCNTCACGCPSNQRGPTCSTTAQ 96
T A+ TW V C + K P CCV+ S++YN +++ C TC+CGC + + C
Sbjct: 207 TQALMTWNVTCTYSQFLAQKTPTCCVSLSSFYNKTIVSCPTCSCGCRNTSQPGNCVDPKG 266
Query: 97 SMLLPPEALLVPFDNRTQKALAWAELKHYNVPKPMPCGDY-CGVSINWHISTDYNKGWSA 155
P A ++P K+ +P + C + C V I+WH+ +Y + W
Sbjct: 267 ----PRIASVIPNPG-----------KNAYIPPLVQCTKHMCPVRIHWHVKVNYKQYWRV 311
Query: 156 RMTLFNWD-NVDLANWFAAIVMDKAYDGFEKAYSFNSTSVG-----KNTIFMQGLEGLNY 209
++T+ N++ N++ + W +V +D + +SFN + +T + G++ N
Sbjct: 312 KVTITNFNYNMNYSQW-NLVVQHPNFDNLTQTFSFNYKPLTPYASINDTGILWGIKFYND 370
Query: 210 LVKQTNMSGS--DYLVPGKQQSVLSFTKKLTPGINVVAGDGFPSKVFFNGDECAMP 263
L+ Q G+ L+ K+ S +F K G FP +++FNGD C MP
Sbjct: 371 LLMQAGPFGNVQSELLFQKEASAFTFEK----------GWAFPRRIYFNGDNCVMP 416
>AT5G60920.1 | chr5:24511466-24513932 REVERSE LENGTH=457
Length = 456
Score = 88.2 bits (217), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 115/249 (46%), Gaps = 35/249 (14%)
Query: 25 PTEFPDPSGLDSTTLAIATWQVVCNITTSKGAK-PKCCVTFSAYYNDSVIPCNTCACGCP 83
PT+F + TT A+ TW + C + + P CCV+ S++YN++++ C TCACGC
Sbjct: 198 PTKFVT-TDTRRTTQAMMTWNITCTYSQFLAQRTPTCCVSLSSFYNETIVGCPTCACGCQ 256
Query: 84 SNQRGPTCSTTAQSMLLPPEALLVPFDNRTQKALAWAELKHYNVPKPMPCGDY-CGVSIN 142
+N+ T + + L P L + K K +P + C + C + ++
Sbjct: 257 NNR------TESGACLDPDTPHLASVVSPPTK-------KGTVLPPLVQCTRHMCPIRVH 303
Query: 143 WHISTDYNKGWSARMTLFNWD-NVDLANWFAAIVMDKAYDGFEKAYSFNSTSVG-----K 196
WH+ +Y + W ++T+ N++ ++ W + D + +SFN S+
Sbjct: 304 WHVKQNYKEYWRVKITITNFNYRLNYTQW-NLVAQHPNLDNITQIFSFNYKSLTPYAGLN 362
Query: 197 NTIFMQGLEGLNYLVKQTNMSGS--DYLVPGKQQSVLSFTKKLTPGINVVAGDGFPSKVF 254
+T + G++ N + + G+ ++ K QS +F K G FP +++
Sbjct: 363 DTAMLWGVKFYNDFLSEAGPLGNVQSEILFRKDQSTFTFEK----------GWAFPRRIY 412
Query: 255 FNGDECAMP 263
FNGD C MP
Sbjct: 413 FNGDNCVMP 421
>AT1G09790.1 | chr1:3168568-3170819 REVERSE LENGTH=455
Length = 454
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 112/251 (44%), Gaps = 45/251 (17%)
Query: 25 PTEFPDPSGLDSTTLAIATWQVVCNITTSKGA-KPKCCVTFSAYYNDSVIPCNTCACGCP 83
PT+F G T A+ATW+ VC + + + PKCCV+ SA+Y +++PC T
Sbjct: 197 PTKFSTDKGRRKTQ-ALATWEAVCVYSQFRSSPSPKCCVSLSAFYYQNIVPCPT------ 249
Query: 84 SNQRGPTCSTTAQSMLLPPEALLVPFDNRTQKALAWAELKH---YNVPKPMPCGDY-CGV 139
G + S + LPP + E KH V + C D+ C +
Sbjct: 250 -CSCGCSSSHCVKDGELPP----------------YLEQKHDPDEEVSPVVKCSDHMCPI 292
Query: 140 SINWHISTDYNKGWSARMTLFNWDNV-DLANWFAAIVMDKAYDGFEKAYSFNSTSVG--K 196
I+WH+ +Y + W ++T N++ + + NW +V+ ++ +SFN S+ +
Sbjct: 293 RIHWHVKVNYREYWRVKITATNFNTMKNYTNW-NLVVLHPNLKSVQQVFSFNYKSLTPYQ 351
Query: 197 NTI----FMQGLEGLNYLVKQTNMSGSDYLVPGKQQSVLSFTKKLTPGINVVAGDGFPSK 252
N+I G++ N ++ Q G+ Q +L KK G FP +
Sbjct: 352 NSINDTGMFWGVQFYNDVLLQEGKIGN------VQTELL--LKKDMGNFTFREGWAFPRR 403
Query: 253 VFFNGDECAMP 263
+ FNGDEC MP
Sbjct: 404 ILFNGDECVMP 414
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.318 0.133 0.425
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 6,643,326
Number of extensions: 287677
Number of successful extensions: 621
Number of sequences better than 1.0e-05: 10
Number of HSP's gapped: 591
Number of HSP's successfully gapped: 10
Length of query: 297
Length of database: 11,106,569
Length adjustment: 98
Effective length of query: 199
Effective length of database: 8,419,801
Effective search space: 1675540399
Effective search space used: 1675540399
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 111 (47.4 bits)