BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0300000 Os03g0300000|AK060863
(348 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G02500.1 | chr4:1101638-1103345 FORWARD LENGTH=462 607 e-174
AT3G62720.1 | chr3:23201326-23202708 FORWARD LENGTH=461 593 e-170
AT1G74380.1 | chr1:27959848-27961221 FORWARD LENGTH=458 477 e-135
AT5G07720.1 | chr5:2455757-2457130 FORWARD LENGTH=458 473 e-134
AT1G18690.1 | chr1:6435153-6436694 FORWARD LENGTH=514 463 e-131
AT2G22900.1 | chr2:9744359-9746193 REVERSE LENGTH=450 281 4e-76
AT4G37690.1 | chr4:17708303-17709601 FORWARD LENGTH=433 270 1e-72
AT4G38310.1 | chr4:17948482-17948844 FORWARD LENGTH=121 89 3e-18
>AT4G02500.1 | chr4:1101638-1103345 FORWARD LENGTH=462
Length = 461
Score = 607 bits (1565), Expect = e-174, Method: Compositional matrix adjust.
Identities = 282/345 (81%), Positives = 310/345 (89%)
Query: 4 DPPYTLGPKISDWDEQRAAWHRRHPETPPFVNDVKPRVLLVTGSSPKPCENPVGDHYLLK 63
+ PYTLGPKISDWDEQR+ W ++P P F+ KPRVLLVTGS+PKPCENPVGDHYLLK
Sbjct: 115 NKPYTLGPKISDWDEQRSDWLAKNPSFPNFIGPNKPRVLLVTGSAPKPCENPVGDHYLLK 174
Query: 64 SIKNKMDYCRVHGLEIFYNMALLDAEMAGFWXXXXXXXXXXXXHPEIEFLWWMDSDAMFS 123
SIKNK+DYCR+HG+EIFYNMALLDAEMAGFW HPEIEFLWWMDSDAMF+
Sbjct: 175 SIKNKIDYCRLHGIEIFYNMALLDAEMAGFWAKLPLIRKLLLSHPEIEFLWWMDSDAMFT 234
Query: 124 DMAFELPWERYGPYNLIMHGWDEMVYDDKNWIGLNTGSFLLRNCQWSLDFLDTWAPMGPK 183
DMAFELPWERY YNL+MHGW+EMVYD KNWIGLNTGSFLLRN QW+LD LDTWAPMGPK
Sbjct: 235 DMAFELPWERYKDYNLVMHGWNEMVYDQKNWIGLNTGSFLLRNNQWALDLLDTWAPMGPK 294
Query: 184 GPVRIEAGKVLTKYLKDRPVFEADDQSAMVYILATEREKWGDKVYLENGYYLHGYWGILV 243
G +R EAGKVLT+ LKDRPVFEADDQSAMVY+LAT+R+ WG+KVYLE+GYYLHGYWGILV
Sbjct: 295 GKIREEAGKVLTRELKDRPVFEADDQSAMVYLLATQRDAWGNKVYLESGYYLHGYWGILV 354
Query: 244 DRYEEMLENYHPGLGDHRWPLVTHFVGCKPCGKFGDYPVERCLKQMERAFNFGDNQILQM 303
DRYEEM+ENYHPGLGDHRWPLVTHFVGCKPCGKFGDYPVERCLKQM+RAFNFGDNQILQ+
Sbjct: 355 DRYEEMIENYHPGLGDHRWPLVTHFVGCKPCGKFGDYPVERCLKQMDRAFNFGDNQILQI 414
Query: 304 YGFTHKSLGSRKVKRIRNETSNPLDVKDELGLLHPAFKAMKTTST 348
YGFTHKSL SRKVKR+RNETSNPL++KDELGLLHPAFKA+K +
Sbjct: 415 YGFTHKSLASRKVKRVRNETSNPLEMKDELGLLHPAFKAVKVQTN 459
>AT3G62720.1 | chr3:23201326-23202708 FORWARD LENGTH=461
Length = 460
Score = 593 bits (1529), Expect = e-170, Method: Compositional matrix adjust.
Identities = 276/345 (80%), Positives = 300/345 (86%)
Query: 4 DPPYTLGPKISDWDEQRAAWHRRHPETPPFVNDVKPRVLLVTGSSPKPCENPVGDHYLLK 63
+ PY+LGPKISDWDEQR W +++P P FV KPRVLLVTGS+PKPCENPVGDHYLLK
Sbjct: 114 NKPYSLGPKISDWDEQRRDWLKQNPSFPNFVAPNKPRVLLVTGSAPKPCENPVGDHYLLK 173
Query: 64 SIKNKMDYCRVHGLEIFYNMALLDAEMAGFWXXXXXXXXXXXXHPEIEFLWWMDSDAMFS 123
SIKNK+DYCR+HG+EIFYNMALLDAEMAGFW HPEIEFLWWMDSDAMF+
Sbjct: 174 SIKNKIDYCRIHGIEIFYNMALLDAEMAGFWAKLPLIRKLLLSHPEIEFLWWMDSDAMFT 233
Query: 124 DMAFELPWERYGPYNLIMHGWDEMVYDDKNWIGLNTGSFLLRNCQWSLDFLDTWAPMGPK 183
DM FELPWERY YNL+MHGW+EMVYD KNWIGLNTGSFLLRN QWSLD LD WAPMGPK
Sbjct: 234 DMVFELPWERYKDYNLVMHGWNEMVYDQKNWIGLNTGSFLLRNSQWSLDLLDAWAPMGPK 293
Query: 184 GPVRIEAGKVLTKYLKDRPVFEADDQSAMVYILATEREKWGDKVYLENGYYLHGYWGILV 243
G +R EAGKVLT+ LKDRP FEADDQSAMVY+LATEREKWG KVYLE+GYYLHGYWGILV
Sbjct: 294 GKIREEAGKVLTRELKDRPAFEADDQSAMVYLLATEREKWGGKVYLESGYYLHGYWGILV 353
Query: 244 DRYEEMLENYHPGLGDHRWPLVTHFVGCKPCGKFGDYPVERCLKQMERAFNFGDNQILQM 303
DRYEEM+EN+ PG GDHRWPLVTHFVGCKPCGKFGDYPVERCL+QM+RAFNFGDNQILQM
Sbjct: 354 DRYEEMIENHKPGFGDHRWPLVTHFVGCKPCGKFGDYPVERCLRQMDRAFNFGDNQILQM 413
Query: 304 YGFTHKSLGSRKVKRIRNETSNPLDVKDELGLLHPAFKAMKTTST 348
YGFTHKSLGSR+VK RN+T PLD KDE GLLHP FKA K ++T
Sbjct: 414 YGFTHKSLGSRRVKPTRNQTDRPLDAKDEFGLLHPPFKAAKLSTT 458
>AT1G74380.1 | chr1:27959848-27961221 FORWARD LENGTH=458
Length = 457
Score = 477 bits (1227), Expect = e-135, Method: Compositional matrix adjust.
Identities = 211/329 (64%), Positives = 265/329 (80%), Gaps = 1/329 (0%)
Query: 7 YTLGPKISDWDEQRAAWHRRHPETPPFVNDVKPRVLLVTGSSPKPCENPVGDHYLLKSIK 66
Y LGPKI+DWD QR W ++PE P VN K R+LL+TGS PKPC+NP+GDHYLLKS+K
Sbjct: 119 YVLGPKITDWDSQRKVWLNQNPEFPSTVNG-KARILLLTGSPPKPCDNPIGDHYLLKSVK 177
Query: 67 NKMDYCRVHGLEIFYNMALLDAEMAGFWXXXXXXXXXXXXHPEIEFLWWMDSDAMFSDMA 126
NK+DYCR+HG+EI YNMA LD E+AG+W HPE+E++WWMDSDA+F+D+
Sbjct: 178 NKIDYCRLHGIEIVYNMAHLDKELAGYWAKLPMIRRLMLSHPEVEWIWWMDSDALFTDIL 237
Query: 127 FELPWERYGPYNLIMHGWDEMVYDDKNWIGLNTGSFLLRNCQWSLDFLDTWAPMGPKGPV 186
F++P RY +NL++HG+ ++++D K+WI LNTGSFLLRNCQWSLD LD WAPMGPKGP+
Sbjct: 238 FQIPLARYQKHNLVIHGYPDLLFDQKSWIALNTGSFLLRNCQWSLDLLDAWAPMGPKGPI 297
Query: 187 RIEAGKVLTKYLKDRPVFEADDQSAMVYILATEREKWGDKVYLENGYYLHGYWGILVDRY 246
R EAGKVLT YLK RP FEADDQSA++Y+L ++++ W +KV++EN YYLHG+W LVDRY
Sbjct: 298 RDEAGKVLTAYLKGRPAFEADDQSALIYLLLSQKDTWMEKVFVENQYYLHGFWEGLVDRY 357
Query: 247 EEMLENYHPGLGDHRWPLVTHFVGCKPCGKFGDYPVERCLKQMERAFNFGDNQILQMYGF 306
EEM+E YHPGLGD RWP VTHFVGCKPCG + DY VERCLK MERAFNF DNQ+L++YGF
Sbjct: 358 EEMIEKYHPGLGDERWPFVTHFVGCKPCGSYADYAVERCLKSMERAFNFADNQVLKLYGF 417
Query: 307 THKSLGSRKVKRIRNETSNPLDVKDELGL 335
+H+ L S K+KRIRNET +PL+ D+ +
Sbjct: 418 SHRGLLSPKIKRIRNETVSPLEFVDKFDI 446
>AT5G07720.1 | chr5:2455757-2457130 FORWARD LENGTH=458
Length = 457
Score = 473 bits (1218), Expect = e-134, Method: Compositional matrix adjust.
Identities = 208/329 (63%), Positives = 263/329 (79%), Gaps = 1/329 (0%)
Query: 7 YTLGPKISDWDEQRAAWHRRHPETPPFVNDVKPRVLLVTGSSPKPCENPVGDHYLLKSIK 66
YTLGPKI++WD++R W ++P+ P F+N K +VLL+TGS PKPC+NP+GDHYLLKS+K
Sbjct: 118 YTLGPKITNWDQKRKLWLTQNPDFPSFING-KAKVLLLTGSPPKPCDNPIGDHYLLKSVK 176
Query: 67 NKMDYCRVHGLEIFYNMALLDAEMAGFWXXXXXXXXXXXXHPEIEFLWWMDSDAMFSDMA 126
NK+DYCR+HG+EI YNMA LD E+AG+W HPEIE++WWMDSDA+F+DM
Sbjct: 177 NKIDYCRIHGIEIVYNMAHLDKELAGYWAKLPMIRRLMLSHPEIEWIWWMDSDALFTDMV 236
Query: 127 FELPWERYGPYNLIMHGWDEMVYDDKNWIGLNTGSFLLRNCQWSLDFLDTWAPMGPKGPV 186
FE+P RY +NL++HG+ ++++D K+WI LNTGSFL RNCQWSLD LD WAPMGPKGP+
Sbjct: 237 FEIPLSRYENHNLVIHGYPDLLFDQKSWIALNTGSFLFRNCQWSLDLLDAWAPMGPKGPI 296
Query: 187 RIEAGKVLTKYLKDRPVFEADDQSAMVYILATEREKWGDKVYLENGYYLHGYWGILVDRY 246
R EAGK+LT LK RP FEADDQSA++Y+L +++E W +KV++EN YYLHG+W LVD+Y
Sbjct: 297 REEAGKILTANLKGRPAFEADDQSALIYLLLSQKETWMEKVFVENQYYLHGFWEGLVDKY 356
Query: 247 EEMLENYHPGLGDHRWPLVTHFVGCKPCGKFGDYPVERCLKQMERAFNFGDNQILQMYGF 306
EEM+E YHPGLGD RWP +THFVGCKPCG + DY VERCLK MERAFNF DNQ+L++YGF
Sbjct: 357 EEMMEKYHPGLGDERWPFITHFVGCKPCGSYADYAVERCLKSMERAFNFADNQVLKLYGF 416
Query: 307 THKSLGSRKVKRIRNETSNPLDVKDELGL 335
H+ L S K+KRIRNET+ PL D +
Sbjct: 417 GHRGLLSPKIKRIRNETTFPLKFVDRFDI 445
>AT1G18690.1 | chr1:6435153-6436694 FORWARD LENGTH=514
Length = 513
Score = 463 bits (1191), Expect = e-131, Method: Compositional matrix adjust.
Identities = 202/329 (61%), Positives = 262/329 (79%), Gaps = 1/329 (0%)
Query: 7 YTLGPKISDWDEQRAAWHRRHPETPPFVNDVKPRVLLVTGSSPKPCENPVGDHYLLKSIK 66
YTLGPKI++WD QR W ++PE P VN K R+LL+TGSSP PC+ P+G++YLLK++K
Sbjct: 177 YTLGPKITNWDSQRKVWLNQNPEFPNIVNG-KARILLLTGSSPGPCDKPIGNYYLLKAVK 235
Query: 67 NKMDYCRVHGLEIFYNMALLDAEMAGFWXXXXXXXXXXXXHPEIEFLWWMDSDAMFSDMA 126
NK+DYCR+HG+EI YNMA LD E++G+W HPE+E++WWMDSDA+F+D+
Sbjct: 236 NKIDYCRLHGIEIVYNMANLDEELSGYWTKLPMIRTLMLSHPEVEWIWWMDSDALFTDIL 295
Query: 127 FELPWERYGPYNLIMHGWDEMVYDDKNWIGLNTGSFLLRNCQWSLDFLDTWAPMGPKGPV 186
FE+P RY +NL++HG+ +++++ K+W+ LNTG FLLRNCQWSLD LD WAPMGPKG +
Sbjct: 296 FEIPLPRYENHNLVIHGYPDLLFNQKSWVALNTGIFLLRNCQWSLDLLDAWAPMGPKGKI 355
Query: 187 RIEAGKVLTKYLKDRPVFEADDQSAMVYILATEREKWGDKVYLENGYYLHGYWGILVDRY 246
R E GK+LT YLK RP FEADDQSA++Y+L +++EKW +KVY+EN YYLHG+W LVDRY
Sbjct: 356 RDETGKILTAYLKGRPAFEADDQSALIYLLLSQKEKWIEKVYVENQYYLHGFWEGLVDRY 415
Query: 247 EEMLENYHPGLGDHRWPLVTHFVGCKPCGKFGDYPVERCLKQMERAFNFGDNQILQMYGF 306
EEM+E YHPGLGD RWP VTHFVGCKPCG + DY V+RC K MERAFNF DNQ+L++YGF
Sbjct: 416 EEMIEKYHPGLGDERWPFVTHFVGCKPCGSYADYAVDRCFKSMERAFNFADNQVLKLYGF 475
Query: 307 THKSLGSRKVKRIRNETSNPLDVKDELGL 335
+H+ L S K+KRIRNET +PL+ D+ +
Sbjct: 476 SHRGLLSPKIKRIRNETVSPLESVDKFDI 504
>AT2G22900.1 | chr2:9744359-9746193 REVERSE LENGTH=450
Length = 449
Score = 281 bits (718), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 141/347 (40%), Positives = 196/347 (56%), Gaps = 43/347 (12%)
Query: 4 DPPYTLGPKISDWDEQRAAWHRRHPETPPFVNDVKPRVLLVTGSSPKPCENPVGDHYLLK 63
D YT+ + +WDE+R W HP F+ + R ++VTGS PC+NP+GDH LL+
Sbjct: 91 DLTYTIEKPVKNWDEKRRRWLNLHPS---FIPGAENRTVMVTGSQSAPCKNPIGDHLLLR 147
Query: 64 SIKNKMDYCRVHGLEIFYNMALLDAEMAGFWXXXXXXXXXXXXHPEIEFLWWMDSDAMFS 123
KNK+DYCR+HG +IFY+ ALL +M +W HPE E++WW+DSDA+F+
Sbjct: 148 FFKNKVDYCRIHGHDIFYSNALLHPKMNSYWAKLPAVKAAMIAHPEAEWIWWVDSDALFT 207
Query: 124 DMAFELPWERYGPYNLIMHGWDEMVYDDKNWIGLNTGSFLLRNCQWSLDFLDTWAPMGPK 183
DM F PW RY +NL++HGW ++Y+D++W LN G FL+RNCQWS++ +DTW MGP
Sbjct: 208 DMDFTPPWRRYKEHNLVVHGWPGVIYNDRSWTALNAGVFLIRNCQWSMELIDTWTGMGPV 267
Query: 184 GPVRIEAGKVLTKYLKDRPVFEADDQSAMVYILATEREKWGDKVYLENGYYLHGYWGILV 243
P + G++ KD+ E+DDQ+A++Y+L RE + K+YLE +Y GYW +V
Sbjct: 268 SPEYAKWGQIQRSIFKDKLFPESDDQTALLYLLYKHREVYYPKIYLEGDFYFEGYWLEIV 327
Query: 244 -------DRYEEM---------------------------LENYHPGLGDHRWPLVTHFV 269
+RY EM L+ G G R P VTHF
Sbjct: 328 PGLSNVTERYLEMEREDATLRRRHAEKVSERYAAFREERFLKGERGGKGSKRRPFVTHFT 387
Query: 270 GCKPCGKFGD----YPVERCLKQMERAFNFGDNQILQMYGFTHKSLG 312
GC+PC GD Y + C M +A NF DNQ+++ YGF H LG
Sbjct: 388 GCQPCS--GDHNKMYDGDTCWNGMIKAINFADNQVMRKYGFVHSDLG 432
>AT4G37690.1 | chr4:17708303-17709601 FORWARD LENGTH=433
Length = 432
Score = 270 bits (689), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 135/347 (38%), Positives = 192/347 (55%), Gaps = 43/347 (12%)
Query: 4 DPPYTLGPKISDWDEQRAAWHRRHPETPPFVNDVKPRVLLVTGSSPKPCENPVGDHYLLK 63
D Y++ I+ WDE+R W HP P + R+++VTGS PC+NP+GDH LL+
Sbjct: 74 DLSYSIEKPITKWDEKRNQWFESHPSFKPGSEN---RIVMVTGSQSSPCKNPIGDHLLLR 130
Query: 64 SIKNKMDYCRVHGLEIFYNMALLDAEMAGFWXXXXXXXXXXXXHPEIEFLWWMDSDAMFS 123
KNK+DY R+HG +IFY+ +LL +M +W HPE E++WW+DSDA+F+
Sbjct: 131 CFKNKVDYARIHGHDIFYSNSLLHPKMNSYWAKLPVVKAAMLAHPEAEWIWWVDSDAIFT 190
Query: 124 DMAFELPWERYGPYNLIMHGWDEMVYDDKNWIGLNTGSFLLRNCQWSLDFLDTWAPMGPK 183
DM F+ P RY +NL++HGW ++Y+ ++W LN G FL+RNCQWS+D +DTW MGP
Sbjct: 191 DMEFKPPLHRYRQHNLVVHGWPNIIYEKQSWTALNAGVFLIRNCQWSMDLIDTWKSMGPV 250
Query: 184 GPVRIEAGKVLTKYLKDRPVFEADDQSAMVYILATEREKWGDKVYLENGYYLHGYW-GIL 242
P + G + KD+ E+DDQ+A++Y+L +E + K+YLE YYL GYW G+
Sbjct: 251 SPDYKKWGPIQRSIFKDKLFPESDDQTALIYLLYKHKELYYPKIYLEAEYYLQGYWIGVF 310
Query: 243 VD---------------------------------RYEEMLENYHPGLGDHRWPLVTHFV 269
D R E L+ G G R +THF
Sbjct: 311 GDFANVTERYLEMEREDDTLRRRHAEKVSERYGAFREERFLKGEFGGRGSRRRAFITHFT 370
Query: 270 GCKPCGKFGD----YPVERCLKQMERAFNFGDNQILQMYGFTHKSLG 312
GC+PC GD Y + C +M RA NF DNQ++++YG+ H L
Sbjct: 371 GCQPCS--GDHNPSYDGDTCWNEMIRALNFADNQVMRVYGYVHSDLS 415
>AT4G38310.1 | chr4:17948482-17948844 FORWARD LENGTH=121
Length = 120
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 62/106 (58%), Gaps = 4/106 (3%)
Query: 4 DPPYTLGPKISDWDEQRAAWHRRHPETPPFVNDVKPRVLLVTGSSPKPCENPVGDHYLL- 62
D Y++ I++WDE+R W + HP P + R+L+VTGS PC+NP+GDH LL
Sbjct: 15 DLSYSIEKSITNWDEKRHEWFKSHPSFKPGSEN---RILMVTGSQSSPCKNPIGDHLLLL 71
Query: 63 KSIKNKMDYCRVHGLEIFYNMALLDAEMAGFWXXXXXXXXXXXXHP 108
+ KNK+DY R+HG +IFY+ +LL +M +W HP
Sbjct: 72 RCFKNKVDYARIHGHDIFYSNSLLHPKMNSYWAKLPVVKAAMLAHP 117
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.322 0.140 0.471
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 8,555,044
Number of extensions: 387788
Number of successful extensions: 708
Number of sequences better than 1.0e-05: 8
Number of HSP's gapped: 699
Number of HSP's successfully gapped: 8
Length of query: 348
Length of database: 11,106,569
Length adjustment: 99
Effective length of query: 249
Effective length of database: 8,392,385
Effective search space: 2089703865
Effective search space used: 2089703865
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 112 (47.8 bits)