BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0297000 Os03g0297000|AK101359
(170 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G08890.1 | chr3:2706701-2707775 FORWARD LENGTH=171 254 1e-68
AT5G37070.1 | chr5:14651091-14652147 FORWARD LENGTH=171 254 1e-68
AT5G01610.1 | chr5:231075-231994 FORWARD LENGTH=171 246 4e-66
AT2G03350.1 | chr2:1019733-1021071 REVERSE LENGTH=180 157 3e-39
AT5G16380.1 | chr5:5359730-5360613 REVERSE LENGTH=196 62 1e-10
AT3G07470.1 | chr3:2387291-2388343 REVERSE LENGTH=170 62 2e-10
AT5G19860.1 | chr5:6714533-6715837 REVERSE LENGTH=182 60 5e-10
AT4G02360.1 | chr4:1041179-1041643 FORWARD LENGTH=155 60 5e-10
AT3G07460.2 | chr3:2384544-2385617 REVERSE LENGTH=272 55 1e-08
AT1G02816.1 | chr1:621637-622137 FORWARD LENGTH=167 50 5e-07
AT4G02370.1 | chr4:1042458-1042961 FORWARD LENGTH=168 49 1e-06
AT1G02813.1 | chr1:620773-621222 FORWARD LENGTH=150 49 1e-06
>AT3G08890.1 | chr3:2706701-2707775 FORWARD LENGTH=171
Length = 170
Score = 254 bits (650), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 113/170 (66%), Positives = 146/170 (85%)
Query: 1 MDDIMNKLGGYWLGQKANKEISSAGDDIESLSTSVGEGAKWLVNKLKGKMQKPLQELLRE 60
MD I+NK+G YWLG+KANK++ S GDDI SLS+S+ G KWLVNK+KGKMQKPL ELL+E
Sbjct: 1 MDQILNKVGSYWLGKKANKQLDSVGDDINSLSSSIEGGTKWLVNKIKGKMQKPLPELLKE 60
Query: 61 HDLPEGLFPREATNYEFSPETRRLTVHIPAACEVGYRDGSVLRFDATVCGTLEKGRLAEV 120
LP G+FPR+ATNYEF+ +TR+LTV IP+ CEVGY+D SVLRF TV G LEKG+LA+V
Sbjct: 61 FGLPVGIFPRDATNYEFNEQTRKLTVFIPSICEVGYKDTSVLRFTTTVTGFLEKGKLADV 120
Query: 121 EGLKTKVLVWARVTAVRADAAKVHFTAGIRKSRSRDAYEVVRGGIIVEEF 170
EG+KTKV++W +VT++ AD++KVHFTAG++KSRSRDAYEV+R G+ +++F
Sbjct: 121 EGMKTKVMIWVKVTSISADSSKVHFTAGMKKSRSRDAYEVLRDGVEIDKF 170
>AT5G37070.1 | chr5:14651091-14652147 FORWARD LENGTH=171
Length = 170
Score = 254 bits (650), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 117/170 (68%), Positives = 142/170 (83%)
Query: 1 MDDIMNKLGGYWLGQKANKEISSAGDDIESLSTSVGEGAKWLVNKLKGKMQKPLQELLRE 60
MD I+NK+G YWLGQKANKE +S GDD SLS+S+ G KWLVNKLKGKMQKPL ELL+E
Sbjct: 1 MDQILNKVGSYWLGQKANKEFNSVGDDFNSLSSSIEGGTKWLVNKLKGKMQKPLPELLKE 60
Query: 61 HDLPEGLFPREATNYEFSPETRRLTVHIPAACEVGYRDGSVLRFDATVCGTLEKGRLAEV 120
LP G+FP++ATNYEF+ ET +LTV IP CEVGYRD SVLRF TV G LEKG+LAEV
Sbjct: 61 FGLPVGIFPQDATNYEFNEETGKLTVFIPETCEVGYRDSSVLRFSTTVTGYLEKGKLAEV 120
Query: 121 EGLKTKVLVWARVTAVRADAAKVHFTAGIRKSRSRDAYEVVRGGIIVEEF 170
EG+KTKV++W +VT + AD++KV+FTAGI+KSRSRDAYEV+R G+ V++F
Sbjct: 121 EGMKTKVMIWVKVTCISADSSKVYFTAGIKKSRSRDAYEVIRPGVGVDKF 170
>AT5G01610.1 | chr5:231075-231994 FORWARD LENGTH=171
Length = 170
Score = 246 bits (628), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 110/170 (64%), Positives = 141/170 (82%)
Query: 1 MDDIMNKLGGYWLGQKANKEISSAGDDIESLSTSVGEGAKWLVNKLKGKMQKPLQELLRE 60
MD I NK+G YWLGQKANK+ S G+D+ S+STS+ G KWLVNK+KGKMQKPL ELL+E
Sbjct: 1 MDQIFNKVGSYWLGQKANKQFDSVGNDLNSVSTSIEGGTKWLVNKIKGKMQKPLPELLKE 60
Query: 61 HDLPEGLFPREATNYEFSPETRRLTVHIPAACEVGYRDGSVLRFDATVCGTLEKGRLAEV 120
+DLP G+FP +ATNYEF ET++LTV IP+ CEVGY+D SVL+F TV G LEKG+L +V
Sbjct: 61 YDLPIGIFPGDATNYEFDEETKKLTVLIPSICEVGYKDSSVLKFTTTVTGHLEKGKLTDV 120
Query: 121 EGLKTKVLVWARVTAVRADAAKVHFTAGIRKSRSRDAYEVVRGGIIVEEF 170
EG+KTKV++W +VT++ DA+KV+FTAG++KSRSRDAYEV R G+ V++F
Sbjct: 121 EGIKTKVMIWVKVTSISTDASKVYFTAGMKKSRSRDAYEVQRNGLRVDKF 170
>AT2G03350.1 | chr2:1019733-1021071 REVERSE LENGTH=180
Length = 179
Score = 157 bits (396), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 75/168 (44%), Positives = 113/168 (67%), Gaps = 4/168 (2%)
Query: 7 KLGGYWLGQKANKEISSAGDDIESLSTSVGEGAKWLVNKLKGKMQKPLQELLREHDLPEG 66
K+G W+ +KA +E+S+ +D+ + S++V E AKW+ NKLKGK K L +LL+E++LP G
Sbjct: 12 KVGSSWISKKAKEELSNITNDLTTFSSTVEEKAKWIFNKLKGKPLKSLPDLLKEYNLPPG 71
Query: 67 LFPREATNYEFSPETRRLTVHIPAACEVGYRDGSVLRFDATVCGTLEKGRLAEVEGLKTK 126
LFP+ YEF +LTV + CEV ++DGS +R+ V G L +G+L VEG+KTK
Sbjct: 72 LFPQNIICYEFDETKNKLTVFFSSPCEVTFKDGSAIRYATRVKGILLRGKLMGVEGMKTK 131
Query: 127 VLVWARVTAVRADAA---KVHFTAGIRKSRSRDAYEVVRGGI-IVEEF 170
VLVW +VT + +++ K+ FTAG++KSRS+D Y+ I ++ EF
Sbjct: 132 VLVWVKVTTISVESSKSDKLWFTAGVKKSRSKDVYDTPHDAIKVIGEF 179
>AT5G16380.1 | chr5:5359730-5360613 REVERSE LENGTH=196
Length = 195
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 51/112 (45%), Gaps = 6/112 (5%)
Query: 42 LVNKLKGKMQKPLQELLREHDLPEGLFPREATNYEFSPETRRLTVHIPAACEVGYRDGSV 101
L +L + LRE +LP G+ P+ TN+ +T R TV +P C+ + +
Sbjct: 19 LFPQLSSLPDPSFYDYLRESNLPAGIVPKGVTNFSIDIKTGRFTVALPVPCDAKFENQ-- 76
Query: 102 LRFDATVCGTLEKGRLAEVEGLKTK-VLVWARVTAVRADAAK---VHFTAGI 149
FD + G L GR+ + G+ K + +W V + D +HF G+
Sbjct: 77 FHFDYNISGVLSDGRIGNLSGVTQKELFLWFAVKGIHVDPQSSGLIHFDVGV 128
>AT3G07470.1 | chr3:2387291-2388343 REVERSE LENGTH=170
Length = 169
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 60/114 (52%), Gaps = 7/114 (6%)
Query: 54 LQELLREHDLPEGLFPREATNYEFSPETRRLTVHIPAACEVGYRDGSVLRFDATVCGTLE 113
+ E+L + LP G+FP+ + F ET R +V++ ACE Y + + +DA + GT+
Sbjct: 31 IYEILLANGLPSGIFPKGVREFTFDVETGRFSVYLNQACEAKYE--TEIHYDANITGTIG 88
Query: 114 KGRLAEVEGLKTK-VLVWARVTAVRADAAK---VHFTAG-IRKSRSRDAYEVVR 162
+++++ G+ + + +W V +R D ++F G +RK S +E R
Sbjct: 89 SAQISDLSGISAQELFLWFPVKGIRVDVPSSGLIYFDVGVVRKQYSLSLFETPR 142
>AT5G19860.1 | chr5:6714533-6715837 REVERSE LENGTH=182
Length = 181
Score = 60.5 bits (145), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 60/114 (52%), Gaps = 8/114 (7%)
Query: 54 LQELLREHDLPEGLFPREATNYEFSPETRRLTVHIPAACEVGYRDGSVLRFDATVCGTLE 113
+ ELL ++ LP GL P T++ S + R VH+P +CE+ + ++ +D T+ G +
Sbjct: 36 VYELLPKYGLPSGLLPDTVTDFTLS-DDGRFVVHLPNSCEIEFD--YLVHYDKTISGRIG 92
Query: 114 KGRLAEVEGLKT-KVLVWARVTAVRAD---AAKVHFTAG-IRKSRSRDAYEVVR 162
G + E++G++ K +W V ++ D + ++F G I K D ++ +
Sbjct: 93 YGSITELKGIQVKKFFIWLDVDEIKVDLPPSDSIYFKVGFINKKLDIDQFKTIH 146
>AT4G02360.1 | chr4:1041179-1041643 FORWARD LENGTH=155
Length = 154
Score = 60.1 bits (144), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 54/105 (51%), Gaps = 3/105 (2%)
Query: 51 QKPL-QELLREHDLPEGLFPREATNYEFSPETRRLTVHIPAACEVGYRDGSVLRFDATVC 109
QKP + ++ ++LP G+ P+ +YE +P+T V+ CE + L++ +T+
Sbjct: 25 QKPTAYDAVKLYNLPPGILPKGVVDYELNPKTGNFKVYFNDTCEFTIQSYQ-LKYKSTIS 83
Query: 110 GTLEKGRLAEVEGLKTKVL-VWARVTAVRADAAKVHFTAGIRKSR 153
G + G + ++G+ KVL W + V D A + F+ GI +
Sbjct: 84 GVISPGHVKNLKGVSVKVLFFWVNIAEVSLDGADLDFSVGIASAS 128
>AT3G07460.2 | chr3:2384544-2385617 REVERSE LENGTH=272
Length = 271
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 61/122 (50%), Gaps = 7/122 (5%)
Query: 51 QKPLQELLREHDLPEGLFPREATNYEFSPETRRLTVHIPAACEVGYRDGSVLRFDATVCG 110
+ + E+L + LP GLFP+ + + ET R +V++ +C+ Y + L +D V G
Sbjct: 27 NESIDEILLANGLPLGLFPKGVKGFTVNGETGRFSVYLNQSCQAKYE--TELHYDEIVSG 84
Query: 111 TLEKGRLAEVEGLKTK-VLVWARVTAVRADAAK---VHFTAGI-RKSRSRDAYEVVRGGI 165
T+ ++ ++ G+ + + +W +V +R D + F G+ RK S +E R +
Sbjct: 85 TIGYAQIRDLSGISAQELFLWLQVKGIRVDVPSSGLIFFDVGVLRKQYSLSLFETPRDCV 144
Query: 166 IV 167
V
Sbjct: 145 AV 146
>AT1G02816.1 | chr1:621637-622137 FORWARD LENGTH=167
Length = 166
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 21/98 (21%), Positives = 49/98 (50%), Gaps = 1/98 (1%)
Query: 57 LLREHDLPEGLFPREATNYEFSPETRRLTVHIPAACEVGYRDGSVLRFDATVCGTLEKGR 116
LL+ ++ P G+ P+ +Y+ T + + +C + L + +T+ G + + +
Sbjct: 35 LLQSYNFPVGILPKGVVSYDLDKSTGQFHAYFNKSCSFALQGSYQLDYKSTISGYISENK 94
Query: 117 LAEVEGLKTKVL-VWARVTAVRADAAKVHFTAGIRKSR 153
+ ++ G+K KVL +W + V + ++ F+ GI +
Sbjct: 95 ITKLTGVKVKVLFLWLNIVEVIRNGDELEFSVGITSAN 132
>AT4G02370.1 | chr4:1042458-1042961 FORWARD LENGTH=168
Length = 167
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/99 (22%), Positives = 47/99 (47%), Gaps = 1/99 (1%)
Query: 56 ELLREHDLPEGLFPREATNYEFSPETRRLTVHIPAACEVGYRDGSVLRFDATVCGTLEKG 115
LL+ ++ P G+ P+ Y+ T + + +C L + +T+ G + +
Sbjct: 34 SLLQSYNFPVGILPKGVVAYDLDTTTGKFHAYFNDSCSFNLVGSYQLNYKSTISGYISEN 93
Query: 116 RLAEVEGLKTKVL-VWARVTAVRADAAKVHFTAGIRKSR 153
+L ++ G+K KVL +W + V + ++ F+ GI +
Sbjct: 94 KLKKLTGVKVKVLFLWLNIVEVIRNGDEMEFSVGITSAN 132
>AT1G02813.1 | chr1:620773-621222 FORWARD LENGTH=150
Length = 149
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 53/119 (44%), Gaps = 11/119 (9%)
Query: 31 LSTSVGEGAKWLVNKLKGKMQKPLQELLREHDLPEGLFPREATNYEFSPETRRLTVHIPA 90
LSTSV + G+ ++ + ++L + LP G+ P +Y+ + T V
Sbjct: 11 LSTSVS---------VSGQKKRSVYQVLENYTLPRGILPEGVHDYDLNRRTGVFKVRFNT 61
Query: 91 ACEVGYRDGSVLRFDATVCGTLEKGRLAEVEGLKTKVL-VWARVTAVRADAAKVHFTAG 148
C+ D +++ + G + +GR+ + G+ KVL W ++ V D V F G
Sbjct: 62 TCQFSI-DSYKVKYKPVISGIITRGRVIRLIGVSVKVLFFWINISEVSRDGDDVEFFVG 119
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.317 0.135 0.394
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 3,540,841
Number of extensions: 135230
Number of successful extensions: 361
Number of sequences better than 1.0e-05: 12
Number of HSP's gapped: 362
Number of HSP's successfully gapped: 12
Length of query: 170
Length of database: 11,106,569
Length adjustment: 91
Effective length of query: 79
Effective length of database: 8,611,713
Effective search space: 680325327
Effective search space used: 680325327
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 108 (46.2 bits)