BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0293500 Os03g0293500|AK101594
(605 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G01320.1 | chr5:129484-131625 REVERSE LENGTH=604 964 0.0
AT4G33070.1 | chr4:15952519-15954676 REVERSE LENGTH=608 962 0.0
AT5G54960.1 | chr5:22310858-22312681 REVERSE LENGTH=608 957 0.0
AT5G01330.1 | chr5:132538-134807 REVERSE LENGTH=593 939 0.0
>AT5G01320.1 | chr5:129484-131625 REVERSE LENGTH=604
Length = 603
Score = 964 bits (2492), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 460/585 (78%), Positives = 507/585 (86%), Gaps = 5/585 (0%)
Query: 23 PASAVGCPMTSARPAPVSA-GEASLGRHLARRLVQVGVSDVFAVPGDFNLTLLDHLIAEP 81
P++AV SA P++ E++LGRHL+RRLVQ GV+DVF+VPGDFNLTLLDHLIAEP
Sbjct: 22 PSNAVATIQDSA---PITTTSESTLGRHLSRRLVQAGVTDVFSVPGDFNLTLLDHLIAEP 78
Query: 82 GLRLVGCCNELNXXXXXXXXXXXXXXXXCAVTFTVGGLSVLNAIAGAYSENLPVICIAGG 141
L +GCCNELN C VTFTVGGLSVLNAIAGAYSENLPVICI GG
Sbjct: 79 ELNNIGCCNELNAGYAADGYARSRGVGACVVTFTVGGLSVLNAIAGAYSENLPVICIVGG 138
Query: 142 PNSNDYGTNRILHHTIGLPDFSQELRCFQTVTCHQAVVTNLEDAHEQIDTAIATALRESK 201
PNSND+GTNRILHHTIGLPDFSQELRCFQTVTC+QAVV NLEDAHEQID AIATAL+ESK
Sbjct: 139 PNSNDFGTNRILHHTIGLPDFSQELRCFQTVTCYQAVVNNLEDAHEQIDKAIATALKESK 198
Query: 202 PVYLSISCNLPGLPHPTFSRDPVPFFLAPRLSNKMGLEAAVEATVEFLNKAVKPVLVGGP 261
PVY+SISCNL PHPTF+RDPVPF L PR+SN MGLEAAVEAT+EFLNKAVKPV+VGGP
Sbjct: 199 PVYISISCNLAATPHPTFARDPVPFDLTPRMSNTMGLEAAVEATLEFLNKAVKPVMVGGP 258
Query: 262 KLRVAKAGKAFVDLVDASGYAYAVMPSAKGLVPETHPHFIGTYWGAVSTAFCAEIVESAD 321
KLRVAKA +AF++L DASGY AVMPS KGLVPE HPHFIGTYWGAVST FC+EIVESAD
Sbjct: 259 KLRVAKASEAFLELADASGYPLAVMPSTKGLVPENHPHFIGTYWGAVSTPFCSEIVESAD 318
Query: 322 AYLFAGPIFNDYSSVGYSFLLKKDKAIIVQPERVIVGNGPAFGCVMMKEFLSELAKRVNK 381
AY+FAGPIFNDYSSVGYS LLKK+KAIIV P+RV+V NGP FGCV+M +F ELAKRV +
Sbjct: 319 AYIFAGPIFNDYSSVGYSLLLKKEKAIIVHPDRVVVANGPTFGCVLMSDFFRELAKRVKR 378
Query: 382 NTTAYENYKRIFVPEGQPLESEPNEPLRVNVLFKHVQKMLNSDSAVIAETGDSWFNCQKL 441
N TAYENY+RIFVPEG+PL+ +P EPLRVN +F+H+QKML+S++AVIAETGDSWFNCQKL
Sbjct: 379 NETAYENYERIFVPEGKPLKCKPGEPLRVNAMFQHIQKMLSSETAVIAETGDSWFNCQKL 438
Query: 442 KLPEGCGYEFQMQYGSIGWSVGALLGYAQGAKDKRVIACIGDGSFQVTAQDVSTMIRCAQ 501
KLP+GCGYEFQMQYGSIGWSVGA LGYAQ +KRV++ IGDGSFQVTAQD+STMIR Q
Sbjct: 439 KLPKGCGYEFQMQYGSIGWSVGATLGYAQATPEKRVLSFIGDGSFQVTAQDISTMIRNGQ 498
Query: 502 NSIIFLINNGGYTIEVEIHDGPYNVIKNWNYTGLVDAIHNGEGKCWTSKVKCEEELTEAI 561
+IIFLINNGGYTIEVEIHDGPYNVIKNWNYTGLVDAIHNGEGKCWT+KV+ EEEL EAI
Sbjct: 499 KAIIFLINNGGYTIEVEIHDGPYNVIKNWNYTGLVDAIHNGEGKCWTTKVRYEEELVEAI 558
Query: 562 GMALGE-KDCLCFIEVIAHKDDTSKELLEWGSRVSAANSRPPNPQ 605
A E KD LCFIEVI HKDDTSKELLEWGSRVSAAN RPPNPQ
Sbjct: 559 KTATTEKKDSLCFIEVIVHKDDTSKELLEWGSRVSAANGRPPNPQ 603
>AT4G33070.1 | chr4:15952519-15954676 REVERSE LENGTH=608
Length = 607
Score = 962 bits (2487), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/564 (80%), Positives = 499/564 (88%), Gaps = 1/564 (0%)
Query: 43 EASLGRHLARRLVQVGVSDVFAVPGDFNLTLLDHLIAEPGLRLVGCCNELNXXXXXXXXX 102
+A+LGRHLARRLVQ GV+DVF+VPGDFNLTLLDHL+AEP L L+GCCNELN
Sbjct: 44 DATLGRHLARRLVQAGVTDVFSVPGDFNLTLLDHLMAEPDLNLIGCCNELNAGYAADGYA 103
Query: 103 XXXXXXXCAVTFTVGGLSVLNAIAGAYSENLPVICIAGGPNSNDYGTNRILHHTIGLPDF 162
C VTFTVGGLSVLNAIAGAYSENLP+ICI GGPNSNDYGTNRILHHTIGLPDF
Sbjct: 104 RSRGVGACVVTFTVGGLSVLNAIAGAYSENLPLICIVGGPNSNDYGTNRILHHTIGLPDF 163
Query: 163 SQELRCFQTVTCHQAVVTNLEDAHEQIDTAIATALRESKPVYLSISCNLPGLPHPTFSRD 222
SQELRCFQTVTC+QAVV NL+DAHEQID AI+TAL+ESKPVY+S+SCNL +PH TFSRD
Sbjct: 164 SQELRCFQTVTCYQAVVNNLDDAHEQIDKAISTALKESKPVYISVSCNLAAIPHHTFSRD 223
Query: 223 PVPFFLAPRLSNKMGLEAAVEATVEFLNKAVKPVLVGGPKLRVAKAGKAFVDLVDASGYA 282
PVPF LAPRLSNKMGLEAAVEAT+EFLNKAVKPV+VGGPKLRVAKA AFV+L DASGYA
Sbjct: 224 PVPFSLAPRLSNKMGLEAAVEATLEFLNKAVKPVMVGGPKLRVAKACDAFVELADASGYA 283
Query: 283 YAVMPSAKGLVPETHPHFIGTYWGAVSTAFCAEIVESADAYLFAGPIFNDYSSVGYSFLL 342
A+MPSAKG VPE HPHFIGTYWGAVST FC+EIVESADAY+FAGPIFNDYSSVGYS LL
Sbjct: 284 LAMMPSAKGFVPEHHPHFIGTYWGAVSTPFCSEIVESADAYIFAGPIFNDYSSVGYSLLL 343
Query: 343 KKDKAIIVQPERVIVGNGPAFGCVMMKEFLSELAKRVNKNTTAYENYKRIFVPEGQPLES 402
KK+KAI+VQP+R+ V NGP FGC++M +F EL+KRV +N TAYENY RIFVPEG+PL+
Sbjct: 344 KKEKAIVVQPDRITVANGPTFGCILMSDFFRELSKRVKRNETAYENYHRIFVPEGKPLKC 403
Query: 403 EPNEPLRVNVLFKHVQKMLNSDSAVIAETGDSWFNCQKLKLPEGCGYEFQMQYGSIGWSV 462
E EPLRVN +F+H+QKML+S++AVIAETGDSWFNCQKLKLP+GCGYEFQMQYGSIGWSV
Sbjct: 404 ESREPLRVNTMFQHIQKMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSV 463
Query: 463 GALLGYAQGAKDKRVIACIGDGSFQVTAQDVSTMIRCAQNSIIFLINNGGYTIEVEIHDG 522
GA LGYAQ + +KRV+A IGDGSFQVT QD+STM+R Q +IIFLINNGGYTIEVEIHDG
Sbjct: 464 GATLGYAQASPEKRVLAFIGDGSFQVTVQDISTMLRNGQKTIIFLINNGGYTIEVEIHDG 523
Query: 523 PYNVIKNWNYTGLVDAIHNGEGKCWTSKVKCEEELTEAIGMALGE-KDCLCFIEVIAHKD 581
PYNVIKNWNYTGLVDAIHNGEG CWT+KV+ EEEL EAI A E KDCLCFIEVI HKD
Sbjct: 524 PYNVIKNWNYTGLVDAIHNGEGNCWTAKVRYEEELVEAITTATTEKKDCLCFIEVILHKD 583
Query: 582 DTSKELLEWGSRVSAANSRPPNPQ 605
DTSKELLEWGSRVSAANSRPPNPQ
Sbjct: 584 DTSKELLEWGSRVSAANSRPPNPQ 607
>AT5G54960.1 | chr5:22310858-22312681 REVERSE LENGTH=608
Length = 607
Score = 957 bits (2474), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/568 (79%), Positives = 499/568 (87%), Gaps = 1/568 (0%)
Query: 39 VSAGEASLGRHLARRLVQVGVSDVFAVPGDFNLTLLDHLIAEPGLRLVGCCNELNXXXXX 98
VS +A+LGR+LARRLV++GV+DVF+VPGDFNLTLLDHLIAEP L+L+GCCNELN
Sbjct: 40 VSPCDATLGRYLARRLVEIGVTDVFSVPGDFNLTLLDHLIAEPNLKLIGCCNELNAGYAA 99
Query: 99 XXXXXXXXXXXCAVTFTVGGLSVLNAIAGAYSENLPVICIAGGPNSNDYGTNRILHHTIG 158
C VTFTVGGLSVLNAIAGAYSENLP+ICI GGPNSNDYGTNRILHHTIG
Sbjct: 100 DGYARSRGVGACVVTFTVGGLSVLNAIAGAYSENLPLICIVGGPNSNDYGTNRILHHTIG 159
Query: 159 LPDFSQELRCFQTVTCHQAVVTNLEDAHEQIDTAIATALRESKPVYLSISCNLPGLPHPT 218
LPDF+QELRCFQ VTC QAV+ NLE+AHE IDTAI+TAL+ESKPVY+SISCNLP +P PT
Sbjct: 160 LPDFTQELRCFQAVTCFQAVINNLEEAHELIDTAISTALKESKPVYISISCNLPAIPLPT 219
Query: 219 FSRDPVPFFLAPRLSNKMGLEAAVEATVEFLNKAVKPVLVGGPKLRVAKAGKAFVDLVDA 278
FSR PVPF L ++SN++GL+AAVEA EFLNKAVKPVLVGGPK+RVAKA AFV+L DA
Sbjct: 220 FSRHPVPFMLPMKVSNQIGLDAAVEAAAEFLNKAVKPVLVGGPKMRVAKAADAFVELADA 279
Query: 279 SGYAYAVMPSAKGLVPETHPHFIGTYWGAVSTAFCAEIVESADAYLFAGPIFNDYSSVGY 338
SGY AVMPSAKG VPE H HFIGTYWGAVSTAFCAEIVESADAYLFAGPIFNDYSSVGY
Sbjct: 280 SGYGLAVMPSAKGQVPEHHKHFIGTYWGAVSTAFCAEIVESADAYLFAGPIFNDYSSVGY 339
Query: 339 SFLLKKDKAIIVQPERVIVGNGPAFGCVMMKEFLSELAKRVNKNTTAYENYKRIFVPEGQ 398
S LLKK+KAIIVQP+RV +GNGPAFGCV+MK+FLSELAKR+ N T+YENY RI+VPEG+
Sbjct: 340 SLLLKKEKAIIVQPDRVTIGNGPAFGCVLMKDFLSELAKRIKHNNTSYENYHRIYVPEGK 399
Query: 399 PLESEPNEPLRVNVLFKHVQKMLNSDSAVIAETGDSWFNCQKLKLPEGCGYEFQMQYGSI 458
PL PNE LRVNVLF+H+Q ML+S+SAV+AETGDSWFNCQKLKLPEGCGYEFQMQYGSI
Sbjct: 400 PLRDNPNESLRVNVLFQHIQNMLSSESAVLAETGDSWFNCQKLKLPEGCGYEFQMQYGSI 459
Query: 459 GWSVGALLGYAQGAKDKRVIACIGDGSFQVTAQDVSTMIRCAQNSIIFLINNGGYTIEVE 518
GWSVGA LGYAQ ++RVIACIGDGSFQVTAQDVSTMIRC Q +IIFLINNGGYTIEVE
Sbjct: 460 GWSVGATLGYAQAMPNRRVIACIGDGSFQVTAQDVSTMIRCGQKTIIFLINNGGYTIEVE 519
Query: 519 IHDGPYNVIKNWNYTGLVDAIHNGEGKCWTSKVKCEEELTEAIGMALG-EKDCLCFIEVI 577
IHDGPYNVIKNWNYT V+AIHNGEGKCWT+KV+CEEEL +AI A EK+ CFIEVI
Sbjct: 520 IHDGPYNVIKNWNYTAFVEAIHNGEGKCWTAKVRCEEELVKAINTATNEEKESFCFIEVI 579
Query: 578 AHKDDTSKELLEWGSRVSAANSRPPNPQ 605
HKDDTSKELLEWGSRVSAANSRPPNPQ
Sbjct: 580 VHKDDTSKELLEWGSRVSAANSRPPNPQ 607
>AT5G01330.1 | chr5:132538-134807 REVERSE LENGTH=593
Length = 592
Score = 939 bits (2428), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/586 (77%), Positives = 495/586 (84%), Gaps = 3/586 (0%)
Query: 23 PASAVGCPMTSARPAPVSAGE--ASLGRHLARRLVQVGVSDVFAVPGDFNLTLLDHLIAE 80
P++ V SA A G A+LGRHL+RRLVQ GV+D+F VPGDFNL+LLD LIA
Sbjct: 7 PSNGVATIQDSAPTAATILGSSAATLGRHLSRRLVQAGVTDIFTVPGDFNLSLLDQLIAN 66
Query: 81 PGLRLVGCCNELNXXXXXXXXXXXXXXXXCAVTFTVGGLSVLNAIAGAYSENLPVICIAG 140
P L +GCCNELN C VTFTVGGLSVLNAIAGAYSENLPVICI G
Sbjct: 67 PELNNIGCCNELNAGYAADGYARSRGVGACVVTFTVGGLSVLNAIAGAYSENLPVICIVG 126
Query: 141 GPNSNDYGTNRILHHTIGLPDFSQELRCFQTVTCHQAVVTNLEDAHEQIDTAIATALRES 200
GPNSND+GTNRILHHTIGLPDFSQELRCFQTVTC+QAVV +LEDAHEQID AIATALRES
Sbjct: 127 GPNSNDFGTNRILHHTIGLPDFSQELRCFQTVTCYQAVVNHLEDAHEQIDKAIATALRES 186
Query: 201 KPVYLSISCNLPGLPHPTFSRDPVPFFLAPRLSNKMGLEAAVEATVEFLNKAVKPVLVGG 260
KPVY+SISCNL +PHPTF+ PVPF L PRLSNK LEAAVEAT+EFLNKAVKPV+VGG
Sbjct: 187 KPVYISISCNLAAIPHPTFASYPVPFDLTPRLSNKDCLEAAVEATLEFLNKAVKPVMVGG 246
Query: 261 PKLRVAKAGKAFVDLVDASGYAYAVMPSAKGLVPETHPHFIGTYWGAVSTAFCAEIVESA 320
PKLRVAKA AFV+L DASGY AVMPSAKG VPE HPHFIGTYWGAVST FC+EIVESA
Sbjct: 247 PKLRVAKARDAFVELADASGYPVAVMPSAKGFVPENHPHFIGTYWGAVSTLFCSEIVESA 306
Query: 321 DAYLFAGPIFNDYSSVGYSFLLKKDKAIIVQPERVIVGNGPAFGCVMMKEFLSELAKRVN 380
DAY+FAGPIFNDYSSVGYS LLKK+KAIIV P+ V+V NGP FGCV M EF ELAKRV
Sbjct: 307 DAYIFAGPIFNDYSSVGYSLLLKKEKAIIVHPDSVVVANGPTFGCVRMSEFFRELAKRVK 366
Query: 381 KNTTAYENYKRIFVPEGQPLESEPNEPLRVNVLFKHVQKMLNSDSAVIAETGDSWFNCQK 440
N TAYENY RIFVPEG+PL+ +P EPLR+N +F+H+QKML++++AVIAETGDSWFNCQK
Sbjct: 367 PNKTAYENYHRIFVPEGKPLKCKPREPLRINAMFQHIQKMLSNETAVIAETGDSWFNCQK 426
Query: 441 LKLPEGCGYEFQMQYGSIGWSVGALLGYAQGAKDKRVIACIGDGSFQVTAQDVSTMIRCA 500
LKLP+GCGYEFQMQYGSIGWSVGA LGYAQ +KRV++ IGDGSFQVTAQDVSTMIR
Sbjct: 427 LKLPKGCGYEFQMQYGSIGWSVGATLGYAQATPEKRVLSFIGDGSFQVTAQDVSTMIRNG 486
Query: 501 QNSIIFLINNGGYTIEVEIHDGPYNVIKNWNYTGLVDAIHNGEGKCWTSKVKCEEELTEA 560
Q +IIFLINNGGYTIEVEIHDGPYNVIKNWNYTGLVDAIHNGEGKCWT+KV+ EEEL EA
Sbjct: 487 QKTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTGLVDAIHNGEGKCWTTKVRYEEELVEA 546
Query: 561 IGMA-LGEKDCLCFIEVIAHKDDTSKELLEWGSRVSAANSRPPNPQ 605
I A L +KD LCFIEVI HKDDTSKELLEWGSRVSAAN RPPNPQ
Sbjct: 547 INTATLEKKDSLCFIEVIVHKDDTSKELLEWGSRVSAANGRPPNPQ 592
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.319 0.136 0.415
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 12,832,002
Number of extensions: 549027
Number of successful extensions: 1086
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 1078
Number of HSP's successfully gapped: 4
Length of query: 605
Length of database: 11,106,569
Length adjustment: 104
Effective length of query: 501
Effective length of database: 8,255,305
Effective search space: 4135907805
Effective search space used: 4135907805
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 115 (48.9 bits)