BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0287900 Os03g0287900|AK063663
(147 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G07960.2 | chr1:2467681-2468831 FORWARD LENGTH=147 192 6e-50
AT2G47470.1 | chr2:19481503-19483683 FORWARD LENGTH=362 81 2e-16
AT2G32920.1 | chr2:13962502-13965406 REVERSE LENGTH=441 72 9e-14
AT1G04980.1 | chr1:1413869-1416120 REVERSE LENGTH=448 70 4e-13
AT1G21750.1 | chr1:7645767-7648514 FORWARD LENGTH=502 59 9e-10
AT1G77510.1 | chr1:29126742-29129433 FORWARD LENGTH=509 54 3e-08
AT1G35620.1 | chr1:13156504-13158280 FORWARD LENGTH=441 52 1e-07
AT4G27080.2 | chr4:13589156-13593335 FORWARD LENGTH=533 49 1e-06
AT3G20560.1 | chr3:7182182-7186390 FORWARD LENGTH=484 47 3e-06
AT5G60640.1 | chr5:24371141-24373993 REVERSE LENGTH=598 46 6e-06
>AT1G07960.2 | chr1:2467681-2468831 FORWARD LENGTH=147
Length = 146
Score = 192 bits (488), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 92/119 (77%), Positives = 103/119 (86%), Gaps = 1/119 (0%)
Query: 29 AEVITLTEETFSDKIKEKDTVWFVKFCVPWCKHCKNLGTLWEDLGKVMEGADEIEIGQVD 88
AEVITLT ETFSDKIKEKDT WFVKFCVPWCKHCK LG LWEDLGK MEG DEIE+G+VD
Sbjct: 25 AEVITLTPETFSDKIKEKDTAWFVKFCVPWCKHCKKLGNLWEDLGKAMEGDDEIEVGEVD 84
Query: 89 CGVSKPVCSKVDIHSYPTFKVFYEGEEVAKYKGPRNVESLKNFVSDEAEKAGE-AKLQD 146
CG S+ VC+KV+IHSYPTF +FY GEEV+KYKG R+VESLK FV +E EKA E A+L+D
Sbjct: 85 CGTSRAVCTKVEIHSYPTFMLFYNGEEVSKYKGKRDVESLKAFVVEETEKAAEKAQLED 143
>AT2G47470.1 | chr2:19481503-19483683 FORWARD LENGTH=362
Length = 361
Score = 80.9 bits (198), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 60/104 (57%), Gaps = 2/104 (1%)
Query: 34 LTEETFSDKIKEKDTVWFVKFCVPWCKHCKNLGTLWEDLGKVMEGADEIEIGQVDCGVSK 93
LT+++F ++ KD V+F PWC HCK L +E LG + A + I +VDC K
Sbjct: 28 LTDDSFEKEVG-KDKGALVEFYAPWCGHCKKLAPEYEKLGASFKKAKSVLIAKVDCDEQK 86
Query: 94 PVCSKVDIHSYPTFKVFYEGE-EVAKYKGPRNVESLKNFVSDEA 136
VC+K + YPT + F +G E KY+GPRN E+L +V+ E
Sbjct: 87 SVCTKYGVSGYPTIQWFPKGSLEPQKYEGPRNAEALAEYVNKEG 130
Score = 60.5 bits (145), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 61/116 (52%), Gaps = 1/116 (0%)
Query: 31 VITLTEETFSDKIKEKDTVWFVKFCVPWCKHCKNLGTLWEDLGKVMEGADEIEIGQVDCG 90
V+ LT + F + + +++ V+F PWC HCK+L +E + V + + + I +D
Sbjct: 143 VVVLTPDNFDEIVLDQNKDVLVEFYAPWCGHCKSLAPTYEKVATVFKQEEGVVIANLDAD 202
Query: 91 VSKPVCSKVDIHSYPTFKVFYEGEEVAK-YKGPRNVESLKNFVSDEAEKAGEAKLQ 145
K + K + +PT K F + + Y G R+++ +F+++++ + ++K Q
Sbjct: 203 AHKALGEKYGVSGFPTLKFFPKDNKAGHDYDGGRDLDDFVSFINEKSGTSRDSKGQ 258
>AT2G32920.1 | chr2:13962502-13965406 REVERSE LENGTH=441
Length = 440
Score = 72.4 bits (176), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 51/106 (48%), Gaps = 2/106 (1%)
Query: 27 SGAEVITLTEETFSDKIKEKDTVWFVKFCVPWCKHCKNLGTLWEDLGKVMEGADEIEIGQ 86
S + V+ LT F K+ + V V+F PWC HCK L WE + +++G +
Sbjct: 28 SSSPVVQLTASNFKSKVLNSNGVVLVEFFAPWCGHCKALTPTWEKVANILKGV--ATVAA 85
Query: 87 VDCGVSKPVCSKVDIHSYPTFKVFYEGEEVAKYKGPRNVESLKNFV 132
+D + I +PT KVF G+ Y+G R+ +S+ NF
Sbjct: 86 IDADAHQSAAQDYGIKGFPTIKVFVPGKAPIDYQGARDAKSIANFA 131
Score = 71.2 bits (173), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 59/109 (54%), Gaps = 3/109 (2%)
Query: 32 ITLTEETFSDKIKEKDTVWFVKFCVPWCKHCKNLGTLWEDLGKVMEGADEIEIGQVDCGV 91
+ L F D + E + +W V+F PWC HCK L W+ K ++G ++++G V+C V
Sbjct: 165 VELNASNFDDLVIESNELWIVEFFAPWCGHCKKLAPEWKRAAKNLQG--KVKLGHVNCDV 222
Query: 92 SKPVCSKVDIHSYPTFKVF-YEGEEVAKYKGPRNVESLKNFVSDEAEKA 139
+ + S+ + +PT VF + Y+G R+ ++++F S+ E +
Sbjct: 223 EQSIMSRFKVQGFPTILVFGPDKSSPYPYEGARSASAIESFASELVESS 271
>AT1G04980.1 | chr1:1413869-1416120 REVERSE LENGTH=448
Length = 447
Score = 70.1 bits (170), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 2/106 (1%)
Query: 27 SGAEVITLTEETFSDKIKEKDTVWFVKFCVPWCKHCKNLGTLWEDLGKVMEGADEIEIGQ 86
S + V+ LT F K+ + V V+F PWC HC++L WE + ++G +
Sbjct: 30 SSSPVLQLTPSNFKSKVLNSNGVVLVEFFAPWCGHCQSLTPTWEKVASTLKGI--ATVAA 87
Query: 87 VDCGVSKPVCSKVDIHSYPTFKVFYEGEEVAKYKGPRNVESLKNFV 132
+D K V + +PT KVF G+ Y+G R+ +S+ F
Sbjct: 88 IDADAHKSVSQDYGVRGFPTIKVFVPGKPPIDYQGARDAKSISQFA 133
Score = 65.5 bits (158), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 61/117 (52%), Gaps = 4/117 (3%)
Query: 32 ITLTEETFSDKIKEKDTVWFVKFCVPWCKHCKNLGTLWEDLGKVMEGADEIEIGQVDCGV 91
+ L F + + E +W V+F PWC HCK L W+ ++G ++++G V+C
Sbjct: 170 VELNSSNFDELVTESKELWIVEFFAPWCGHCKKLAPEWKKAANNLKG--KVKLGHVNCDA 227
Query: 92 SKPVCSKVDIHSYPTFKVF-YEGEEVAKYKGPRNVESLKNFVSDEAE-KAGEAKLQD 146
+ + S+ + +PT VF + Y+G R+ ++++F ++ E AG A++ +
Sbjct: 228 EQSIKSRFKVQGFPTILVFGSDKSSPVPYEGARSASAIESFALEQLESNAGPAEVTE 284
>AT1G21750.1 | chr1:7645767-7648514 FORWARD LENGTH=502
Length = 501
Score = 58.9 bits (141), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 56/114 (49%), Gaps = 5/114 (4%)
Query: 31 VITLTEETFSDKIKEKDTVWFVKFCVPWCKHCKNLGTLWEDLGKVM-EGADEIEIGQVDC 89
V+TL F+D I + D + V+F PWC HCK L +E + + + ++D
Sbjct: 32 VLTLDHTNFTDTINKHDFI-VVEFYAPWCGHCKQLAPEYEKAASALSSNVPPVVLAKIDA 90
Query: 90 G--VSKPVCSKVDIHSYPTFKVFYE-GEEVAKYKGPRNVESLKNFVSDEAEKAG 140
++ ++ ++ +PT K+F G+ V +Y GPR E + ++ ++ A
Sbjct: 91 SEETNREFATQYEVQGFPTIKIFRNGGKAVQEYNGPREAEGIVTYLKKQSGPAS 144
>AT1G77510.1 | chr1:29126742-29129433 FORWARD LENGTH=509
Length = 508
Score = 53.9 bits (128), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 58/122 (47%), Gaps = 6/122 (4%)
Query: 31 VITLTEETFSDKIKEKDTVWFVKFCVPWCKHCKNLGTLWEDLGKVMEGAD-EIEIGQVDC 89
V+TL F++ I + D + V+F PWC HC+ L +E + + + + ++D
Sbjct: 31 VLTLDHSNFTETISKHDFI-VVEFYAPWCGHCQKLAPEYEKAASELSSHNPPLALAKIDA 89
Query: 90 G--VSKPVCSKVDIHSYPTFKVFYE-GEEVAKYKGPRNVESLKNFVSDEAEKAG-EAKLQ 145
+K ++ I +PT K+ G+ V Y GPR E + ++ ++ A E K
Sbjct: 90 SEEANKEFANEYKIQGFPTLKILRNGGKSVQDYNGPREAEGIVTYLKKQSGPASVEIKSA 149
Query: 146 DS 147
DS
Sbjct: 150 DS 151
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 45/108 (41%)
Query: 31 VITLTEETFSDKIKEKDTVWFVKFCVPWCKHCKNLGTLWEDLGKVMEGADEIEIGQVDCG 90
V + E+ D + + ++F PWC HC+ L + +++ + + I ++D
Sbjct: 374 VKVVVAESLDDIVFKSGKNVLIEFYAPWCGHCQKLAPILDEVALSFQNDPSVIIAKLDAT 433
Query: 91 VSKPVCSKVDIHSYPTFKVFYEGEEVAKYKGPRNVESLKNFVSDEAEK 138
+ D+ +PT V Y+G R E NFV +EK
Sbjct: 434 ANDIPSDTFDVKGFPTIYFRSASGNVVVYEGDRTKEDFINFVEKNSEK 481
>AT1G35620.1 | chr1:13156504-13158280 FORWARD LENGTH=441
Length = 440
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 52/108 (48%), Gaps = 7/108 (6%)
Query: 31 VITLTEETFSDKIKEKDTVWFVKFCVPWCKHCKNLGTLWEDLGKVMEGADE-IEIGQVDC 89
V+ LT+ F I D + FV F PWC HCK L + ++ + I I +++
Sbjct: 34 VLELTDSNFDSAISTFDCI-FVDFYAPWCGHCKRLNPELDAAAPILAKLKQPIVIAKLNA 92
Query: 90 GVSKPVCSKVDIHSYPTFKVFYEGEEVAKYKGPRN----VESLKNFVS 133
+ K++I ++PT ++ G + +Y GPR V LK FV+
Sbjct: 93 DKYSRLARKIEIDAFPTLMLYNHGVPM-EYYGPRKADLLVRYLKKFVA 139
>AT4G27080.2 | chr4:13589156-13593335 FORWARD LENGTH=533
Length = 532
Score = 48.5 bits (114), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/116 (26%), Positives = 47/116 (40%), Gaps = 16/116 (13%)
Query: 32 ITLTEETFSDKIKEKDTVWFVKFCVPWCKHCKNLGTLWEDLGKVM------EGADEIEIG 85
+ LT F D + + V F PWC C L WE K + E + +
Sbjct: 196 VPLTGRNF-DTFTHQFPILVVNFYAPWCYWCNLLKPSWEKAAKQIKERYDPEMDGRVILA 254
Query: 86 QVDCGVSKPVCSKVDIHSYPTFKVFYEGEEVA---------KYKGPRNVESLKNFV 132
+VDC +C + I YP+ ++F +G ++ Y G R+ ESL V
Sbjct: 255 KVDCTQEGDLCRRNHIQGYPSIRIFRKGSDLKDDNAHHDHESYYGDRDTESLVKMV 310
>AT3G20560.1 | chr3:7182182-7186390 FORWARD LENGTH=484
Length = 483
Score = 47.0 bits (110), Expect = 3e-06, Method: Composition-based stats.
Identities = 28/116 (24%), Positives = 48/116 (41%), Gaps = 16/116 (13%)
Query: 32 ITLTEETFSDKIKEKDTVWFVKFCVPWCKHCKNLGTLWEDLGKVM------EGADEIEIG 85
I LT +F + + + V F PWC L WE ++ E + +G
Sbjct: 144 IPLTSASF-EALSHHFPILVVNFNAPWCYWSNRLKPSWEKAANIIKQRYDPEADGRVLLG 202
Query: 86 QVDCGVSKPVCSKVDIHSYPTFKVFYEGEEVAK---------YKGPRNVESLKNFV 132
VDC +C + I YP+ ++F +G ++ + Y G R+ +S+ V
Sbjct: 203 NVDCTEEPALCKRNHIQGYPSIRIFRKGSDLREDHGHHEHESYYGDRDTDSIVKMV 258
>AT5G60640.1 | chr5:24371141-24373993 REVERSE LENGTH=598
Length = 597
Score = 46.2 bits (108), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 49/103 (47%), Gaps = 3/103 (2%)
Query: 30 EVITLTEETFSDKIKEKDTVWFVKFCVPWCKHCKNLGTLWEDLGKVMEGADEIEIGQVDC 89
+V+ + E F+D I E + V+F PWC HC++L + ++ D + + ++D
Sbjct: 104 DVVVIKERNFTDVI-ENNQYVLVEFYAPWCGHCQSLAPEYAAAATELK-EDGVVLAKIDA 161
Query: 90 GVSKPVCSKVDIHSYPTFKVFYEGEEVAKYKGPRNVESLKNFV 132
+ + + +PT F +GE Y G R E++ +V
Sbjct: 162 TEENELAQEYRVQGFPTLLFFVDGEH-KPYTGGRTKETIVTWV 203
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.314 0.134 0.411
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 2,796,862
Number of extensions: 109335
Number of successful extensions: 263
Number of sequences better than 1.0e-05: 10
Number of HSP's gapped: 267
Number of HSP's successfully gapped: 15
Length of query: 147
Length of database: 11,106,569
Length adjustment: 89
Effective length of query: 58
Effective length of database: 8,666,545
Effective search space: 502659610
Effective search space used: 502659610
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 107 (45.8 bits)