BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0279700 Os03g0279700|AK111338
(191 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G53600.1 | chr3:19875532-19876059 FORWARD LENGTH=176 97 6e-21
AT2G37430.1 | chr2:15706454-15706990 FORWARD LENGTH=179 96 1e-20
AT2G28710.1 | chr2:12322974-12323444 FORWARD LENGTH=157 94 5e-20
AT2G28200.1 | chr2:12024321-12025181 FORWARD LENGTH=287 92 1e-19
AT5G59820.1 | chr5:24103073-24103561 FORWARD LENGTH=163 92 2e-19
AT5G04390.1 | chr5:1239166-1240254 FORWARD LENGTH=363 89 2e-18
AT3G46090.1 | chr3:16926304-16926810 REVERSE LENGTH=169 88 3e-18
AT3G46080.1 | chr3:16922753-16923247 REVERSE LENGTH=165 86 9e-18
AT3G10470.1 | chr3:3260424-3261620 FORWARD LENGTH=399 86 1e-17
AT3G46070.1 | chr3:16920445-16920957 REVERSE LENGTH=171 83 7e-17
AT5G03510.1 | chr5:880353-881231 FORWARD LENGTH=293 83 9e-17
AT1G49900.1 | chr1:18474108-18477643 REVERSE LENGTH=918 74 5e-14
AT3G60580.1 | chr3:22394007-22394873 FORWARD LENGTH=289 73 1e-13
AT1G02030.1 | chr1:355385-356188 REVERSE LENGTH=268 70 9e-13
AT5G43170.1 | chr5:17331050-17331631 REVERSE LENGTH=194 67 6e-12
AT2G45120.1 | chr2:18603680-18604624 FORWARD LENGTH=315 67 7e-12
AT5G61470.1 | chr5:24722870-24723784 FORWARD LENGTH=305 67 7e-12
AT3G49930.1 | chr3:18510246-18510893 FORWARD LENGTH=216 66 1e-11
AT5G04340.1 | chr5:1216321-1217037 REVERSE LENGTH=239 65 3e-11
AT3G19580.1 | chr3:6803293-6804114 REVERSE LENGTH=274 64 4e-11
AT5G56200.1 | chr5:22747768-22749249 FORWARD LENGTH=494 62 2e-10
AT1G27730.1 | chr1:9648302-9648985 REVERSE LENGTH=228 57 8e-09
AT2G17180.1 | chr2:7476835-7477647 REVERSE LENGTH=271 57 8e-09
AT4G35280.1 | chr4:16787429-16788283 REVERSE LENGTH=285 55 2e-08
AT3G29340.1 | chr3:11259587-11262440 REVERSE LENGTH=651 49 1e-06
>AT3G53600.1 | chr3:19875532-19876059 FORWARD LENGTH=176
Length = 175
Score = 97.1 bits (240), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 43/71 (60%), Positives = 50/71 (70%), Gaps = 1/71 (1%)
Query: 51 FECKTCNRQFPSFQALGGHRASHKKPRL-ADGDPAAEAPAKPKVHGCSICGLEFAVGQAL 109
FECKTCNR+F SFQALGGHRASHKKP+L D + + +H C+IC F GQAL
Sbjct: 49 FECKTCNRKFDSFQALGGHRASHKKPKLIVDQEQVKHRNKENDMHKCTICDQMFGTGQAL 108
Query: 110 GGHMRRHRAVM 120
GGHMR+HR M
Sbjct: 109 GGHMRKHRTSM 119
>AT2G37430.1 | chr2:15706454-15706990 FORWARD LENGTH=179
Length = 178
Score = 96.3 bits (238), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 53/124 (42%), Positives = 65/124 (52%), Gaps = 11/124 (8%)
Query: 5 KRPRQQAEEAAFSLFDSSDMARIMLLF---SXXXXXXXXXXXXSPPERMFECKTCNRQFP 61
KR R EE+ + D+A+ +++ S S FECKTCN++F
Sbjct: 2 KRERSDFEES----LKNIDIAKCLMILAQTSMVKQIGLNQHTESHTSNQFECKTCNKRFS 57
Query: 62 SFQALGGHRASHKKPRLA----DGDPAAEAPAKPKVHGCSICGLEFAVGQALGGHMRRHR 117
SFQALGGHRASHKKP+L D + H CSIC F GQALGGHMRRHR
Sbjct: 58 SFQALGGHRASHKKPKLTVEQKDVKHLSNDYKGNHFHKCSICSQSFGTGQALGGHMRRHR 117
Query: 118 AVMA 121
+ M
Sbjct: 118 SSMT 121
>AT2G28710.1 | chr2:12322974-12323444 FORWARD LENGTH=157
Length = 156
Score = 93.6 bits (231), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 48/96 (50%), Positives = 60/96 (62%), Gaps = 8/96 (8%)
Query: 22 SDMARIMLLFSXXXXXXXXXXXXSPPERMFECKTCNRQFPSFQALGGHRASHKKPRLADG 81
++MA ++L S R+F CKTCN++FPSFQALGGHRASH++ +G
Sbjct: 12 NNMANCLILLSKAHQN-------DTKSRVFACKTCNKEFPSFQALGGHRASHRRSAALEG 64
Query: 82 D-PAAEAPAKPKVHGCSICGLEFAVGQALGGHMRRH 116
P + KP H C ICG EFAVGQALGGHMR+H
Sbjct: 65 HAPPSPKRVKPVKHECPICGAEFAVGQALGGHMRKH 100
>AT2G28200.1 | chr2:12024321-12025181 FORWARD LENGTH=287
Length = 286
Score = 92.4 bits (228), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 47/104 (45%), Positives = 53/104 (50%), Gaps = 32/104 (30%)
Query: 50 MFECKTCNRQFPSFQALGGHRASHKKPRLADGDPAAEAPAKPK----------------- 92
++ECKTCNR F SFQALGGHRASHKKPR + + +PK
Sbjct: 114 VYECKTCNRTFSSFQALGGHRASHKKPRTSTEEKTRLPLTQPKSSASEEGQNSHFKVSGS 173
Query: 93 ---------------VHGCSICGLEFAVGQALGGHMRRHRAVMA 121
VH CSICG EF GQALGGHMRRHR +
Sbjct: 174 ALASQASNIINKANKVHECSICGSEFTSGQALGGHMRRHRTAVT 217
>AT5G59820.1 | chr5:24103073-24103561 FORWARD LENGTH=163
Length = 162
Score = 91.7 bits (226), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 43/70 (61%), Positives = 48/70 (68%)
Query: 48 ERMFECKTCNRQFPSFQALGGHRASHKKPRLADGDPAAEAPAKPKVHGCSICGLEFAVGQ 107
+R+F CKTC +QF SFQALGGHRASHKKP K H C ICG+EF +GQ
Sbjct: 36 KRVFTCKTCLKQFHSFQALGGHRASHKKPNNDALSSGLMKKVKTSSHPCPICGVEFPMGQ 95
Query: 108 ALGGHMRRHR 117
ALGGHMRRHR
Sbjct: 96 ALGGHMRRHR 105
>AT5G04390.1 | chr5:1239166-1240254 FORWARD LENGTH=363
Length = 362
Score = 88.6 bits (218), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/105 (44%), Positives = 55/105 (52%), Gaps = 33/105 (31%)
Query: 50 MFECKTCNRQFPSFQALGGHRASHKKPR---------LADGDPAAEA------------- 87
+++CKTC+R FPSFQALGGHRASHKKP+ L A +A
Sbjct: 152 VYQCKTCDRTFPSFQALGGHRASHKKPKAASFYSNLDLKKNTYANDAVSLVHTTTTVFKN 211
Query: 88 -----------PAKPKVHGCSICGLEFAVGQALGGHMRRHRAVMA 121
+K KVH C ICG EF GQALGGHMRRHR +
Sbjct: 212 NNSRSLVVYGKASKNKVHECGICGAEFTSGQALGGHMRRHRGAVV 256
>AT3G46090.1 | chr3:16926304-16926810 REVERSE LENGTH=169
Length = 168
Score = 87.8 bits (216), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 51/73 (69%), Gaps = 3/73 (4%)
Query: 48 ERMFECKTCNRQFPSFQALGGHRASHKKPRLADGDPAAEAPAKPKV---HGCSICGLEFA 104
ER+F CKTC ++F SFQALGGHRASHKK +D + + K H C ICG++F
Sbjct: 37 ERVFRCKTCLKEFSSFQALGGHRASHKKLINSDNPSLLGSLSNKKTKTSHPCPICGVKFP 96
Query: 105 VGQALGGHMRRHR 117
+GQALGGHMRRHR
Sbjct: 97 MGQALGGHMRRHR 109
>AT3G46080.1 | chr3:16922753-16923247 REVERSE LENGTH=165
Length = 164
Score = 86.3 bits (212), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 44/77 (57%), Positives = 55/77 (71%), Gaps = 7/77 (9%)
Query: 48 ERMFECKTCNRQFPSFQALGGHRASHKKPRLADGDPA---AEAPAKPKV---HGCSICGL 101
+R+F CKTC ++F SFQALGGHRASHKK + DP+ + + K K H C ICG+
Sbjct: 34 KRVFRCKTCLKEFSSFQALGGHRASHKKL-INSSDPSLLGSLSNKKTKTATSHPCPICGV 92
Query: 102 EFAVGQALGGHMRRHRA 118
EF +GQALGGHMRRHR+
Sbjct: 93 EFPMGQALGGHMRRHRS 109
>AT3G10470.1 | chr3:3260424-3261620 FORWARD LENGTH=399
Length = 398
Score = 85.9 bits (211), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 53/104 (50%), Gaps = 36/104 (34%)
Query: 50 MFECKTCNRQFPSFQALGGHRASHKKPRLADG---------------------DPAAEAP 88
+++CKTC+R FPSFQALGGHRASHKKP+ A G + P
Sbjct: 181 VYQCKTCDRTFPSFQALGGHRASHKKPKAAMGLHSNHDHKKSNYDDAVSLHLNNVLTTTP 240
Query: 89 ---------------AKPKVHGCSICGLEFAVGQALGGHMRRHR 117
+ KVH C ICG EF GQALGGHMRRHR
Sbjct: 241 NNNSNHRSLVVYGKGSNNKVHECGICGAEFTSGQALGGHMRRHR 284
>AT3G46070.1 | chr3:16920445-16920957 REVERSE LENGTH=171
Length = 170
Score = 83.2 bits (204), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 41/77 (53%), Positives = 47/77 (61%), Gaps = 7/77 (9%)
Query: 48 ERMFECKTCNRQFPSFQALGGHRASHKKPRLADGDP-------AAEAPAKPKVHGCSICG 100
+R+F CKTC R F SFQALGGHRASH K +D + H C ICG
Sbjct: 33 KRVFRCKTCERDFDSFQALGGHRASHSKLTNSDDKSLPGSPKKKPKTTTTTTAHTCPICG 92
Query: 101 LEFAVGQALGGHMRRHR 117
LEF +GQALGGHMR+HR
Sbjct: 93 LEFPMGQALGGHMRKHR 109
>AT5G03510.1 | chr5:880353-881231 FORWARD LENGTH=293
Length = 292
Score = 82.8 bits (203), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 47/104 (45%), Positives = 56/104 (53%), Gaps = 31/104 (29%)
Query: 50 MFECKTCNRQFPSFQALGGHRASHKKPRL--------------ADGDPAAEAPA------ 89
+++CKTC++ F SFQALGGHRASHKKP+L A EA A
Sbjct: 117 VYQCKTCDKSFHSFQALGGHRASHKKPKLGASVFKCVEKKTASASTVETVEAGAVGSFLS 176
Query: 90 ----------KP-KVHGCSICGLEFAVGQALGGHMRRHRAVMAD 122
KP K H CSIC EF+ GQALGGHMRRHR + +
Sbjct: 177 LQVTSSDGSKKPEKTHECSICKAEFSSGQALGGHMRRHRGLTIN 220
>AT1G49900.1 | chr1:18474108-18477643 REVERSE LENGTH=918
Length = 917
Score = 73.9 bits (180), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 46/76 (60%), Gaps = 5/76 (6%)
Query: 46 PPERMFECKTCNRQFPSFQALGGHRASHK-KPRLADGDPAAEAPAK----PKVHGCSICG 100
P ++C C R+ PS+QALGGH+ASH+ KP + + P K K+H CSIC
Sbjct: 745 PKSDSYQCNVCGRELPSYQALGGHKASHRTKPPVENATGEKMRPKKLAPSGKIHKCSICH 804
Query: 101 LEFAVGQALGGHMRRH 116
EF+ GQ+LGGH R H
Sbjct: 805 REFSTGQSLGGHKRLH 820
Score = 67.8 bits (164), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 43/80 (53%), Gaps = 9/80 (11%)
Query: 46 PPERMFECKTCNRQFPSFQALGGHRASHKKPRLADGDPAAEAPAKP---------KVHGC 96
P +F+C C + F S+QALGGH+ASH + A+A K K+H C
Sbjct: 188 PKSDLFKCSICEKVFTSYQALGGHKASHSIKAAQLENAGADAGEKTRSKMLSPSGKIHKC 247
Query: 97 SICGLEFAVGQALGGHMRRH 116
IC + F GQALGGH RRH
Sbjct: 248 DICHVLFPTGQALGGHKRRH 267
>AT3G60580.1 | chr3:22394007-22394873 FORWARD LENGTH=289
Length = 288
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 45/74 (60%), Gaps = 8/74 (10%)
Query: 51 FECKTCNRQFPSFQALGGHRASHKKPRLADGDPAAEAPAK--------PKVHGCSICGLE 102
++C+TC + F S+QALGGHRASHKK R+++ + + ++H C IC
Sbjct: 173 YKCETCGKVFKSYQALGGHRASHKKNRVSNNKTEQRSETEYDNVVVVAKRIHECPICLRV 232
Query: 103 FAVGQALGGHMRRH 116
FA GQALGGH R H
Sbjct: 233 FASGQALGGHKRSH 246
>AT1G02030.1 | chr1:355385-356188 REVERSE LENGTH=268
Length = 267
Score = 69.7 bits (169), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 44/75 (58%), Gaps = 8/75 (10%)
Query: 49 RMFECKTCNRQFPSFQALGGHRASHKKPRLADGDP-------AAEAPAKPKVHGCSICGL 101
+ FEC+TC + F S+QALGGHRASHKK ++A+ D + + H C IC
Sbjct: 158 KWFECETCEKVFKSYQALGGHRASHKK-KIAETDQLGSDELKKKKKKSTSSHHECPICAK 216
Query: 102 EFAVGQALGGHMRRH 116
F GQALGGH R H
Sbjct: 217 VFTSGQALGGHKRSH 231
>AT5G43170.1 | chr5:17331050-17331631 REVERSE LENGTH=194
Length = 193
Score = 67.0 bits (162), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 39/66 (59%)
Query: 51 FECKTCNRQFPSFQALGGHRASHKKPRLADGDPAAEAPAKPKVHGCSICGLEFAVGQALG 110
++C C + F S+QALGGH+ASH+ + + K H CS+CG FA GQALG
Sbjct: 75 YKCGVCYKTFSSYQALGGHKASHRSLYGGGENDKSTPSTAVKSHVCSVCGKSFATGQALG 134
Query: 111 GHMRRH 116
GH R H
Sbjct: 135 GHKRCH 140
>AT2G45120.1 | chr2:18603680-18604624 FORWARD LENGTH=315
Length = 314
Score = 66.6 bits (161), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 42/72 (58%), Gaps = 6/72 (8%)
Query: 51 FECKTCNRQFPSFQALGGHRASHKKPR--LADGDPAAE----APAKPKVHGCSICGLEFA 104
F+C+TC + F S+QALGGHRASHKK + + + + KVH C IC F
Sbjct: 194 FKCETCGKVFKSYQALGGHRASHKKNKACMTKTEQVETEYVLGVKEKKVHECPICFRVFT 253
Query: 105 VGQALGGHMRRH 116
GQALGGH R H
Sbjct: 254 SGQALGGHKRSH 265
>AT5G61470.1 | chr5:24722870-24723784 FORWARD LENGTH=305
Length = 304
Score = 66.6 bits (161), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 51 FECKTCNRQFPSFQALGGHRASHKKPRLADGDP---AAEAPAKPKVHGCSICGLEFAVGQ 107
+ C TC + S+QALGGHR SHK RL D + P + + C IC FA GQ
Sbjct: 228 YTCDTCGKVLRSYQALGGHRTSHKYKRLKISDKNYFGEDGPIVRRQYECQICNRMFASGQ 287
Query: 108 ALGGHMRRHRAVMA 121
ALGGH + H +A
Sbjct: 288 ALGGHKKIHYMFLA 301
>AT3G49930.1 | chr3:18510246-18510893 FORWARD LENGTH=216
Length = 215
Score = 65.9 bits (159), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 42/81 (51%), Gaps = 12/81 (14%)
Query: 48 ERMFECKTCNRQFPSFQALGGHRASHKKPRLADGDPAAEAPAKP------------KVHG 95
++ ++C C + FPS+QALGGH+ SH+KP D + + K H
Sbjct: 91 QKDYKCSVCGKSFPSYQALGGHKTSHRKPVSVDVNNSNGTVTNNGNISNGLVGQSGKTHN 150
Query: 96 CSICGLEFAVGQALGGHMRRH 116
CSIC F GQALGGH R H
Sbjct: 151 CSICFKSFPSGQALGGHKRCH 171
>AT5G04340.1 | chr5:1216321-1217037 REVERSE LENGTH=239
Length = 238
Score = 64.7 bits (156), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 46/83 (55%), Gaps = 16/83 (19%)
Query: 50 MFECKTCNRQFPSFQALGGHRASHKK----PRLADGDPAAEAPAKP------------KV 93
+++C C++ F S+QALGGH+ASH+K + A GD + + A K
Sbjct: 88 IYKCSVCDKAFSSYQALGGHKASHRKSFSLTQSAGGDELSTSSAITTSGISGGGGGSVKS 147
Query: 94 HGCSICGLEFAVGQALGGHMRRH 116
H CSIC FA GQALGGH R H
Sbjct: 148 HVCSICHKSFATGQALGGHKRCH 170
>AT3G19580.1 | chr3:6803293-6804114 REVERSE LENGTH=274
Length = 273
Score = 64.3 bits (155), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 47/90 (52%), Gaps = 19/90 (21%)
Query: 46 PPERM---FECKTCNRQFPSFQALGGHRASHK-KPRLADGDPA--AEAP----------- 88
PPE ++C C + FPS+QALGGH+ASH+ KP A + AP
Sbjct: 98 PPESKNLPYKCNVCEKAFPSYQALGGHKASHRIKPPTVISTTADDSTAPTISIVAGEKHP 157
Query: 89 --AKPKVHGCSICGLEFAVGQALGGHMRRH 116
A K+H CSIC F GQALGGH R H
Sbjct: 158 IAASGKIHECSICHKVFPTGQALGGHKRCH 187
>AT5G56200.1 | chr5:22747768-22749249 FORWARD LENGTH=494
Length = 493
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 42/90 (46%), Gaps = 26/90 (28%)
Query: 53 CKTCNRQFPSFQALGGHRASHKKPRL--------------------------ADGDPAAE 86
C TCN+ F S+QALGGHRASH K ++ A G +
Sbjct: 344 CVTCNKSFSSYQALGGHRASHNKVKILENHQARANAEASLLGTEAIITGLASAQGTNTSL 403
Query: 87 APAKPKVHGCSICGLEFAVGQALGGHMRRH 116
+ + H C+IC F+ GQALGGH R H
Sbjct: 404 SSSHNGDHVCNICHKSFSTGQALGGHKRCH 433
>AT1G27730.1 | chr1:9648302-9648985 REVERSE LENGTH=228
Length = 227
Score = 56.6 bits (135), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 42/79 (53%), Gaps = 13/79 (16%)
Query: 51 FECKTCNRQFPSFQALGGHRASHKK---PRLADG----------DPAAEAPAKPKVHGCS 97
++C C++ F S+QALGGH+ASH+K L+ G +A K H C+
Sbjct: 80 YKCSVCDKTFSSYQALGGHKASHRKNLSQTLSGGGDDHSTSSATTTSAVTTGSGKSHVCT 139
Query: 98 ICGLEFAVGQALGGHMRRH 116
IC F GQALGGH R H
Sbjct: 140 ICNKSFPSGQALGGHKRCH 158
>AT2G17180.1 | chr2:7476835-7477647 REVERSE LENGTH=271
Length = 270
Score = 56.6 bits (135), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 41/89 (46%), Gaps = 20/89 (22%)
Query: 48 ERMFECKTCNRQFPSFQALGGHRASHKKPR-------------------LADGDPAAEAP 88
E FEC C + F S QALGGHRA+HK + + D D
Sbjct: 145 EERFECDGCKKVFGSHQALGGHRATHKDVKGCFANKNITEDPPPPPPQEIVDQDKGKSVK 204
Query: 89 AKPKV-HGCSICGLEFAVGQALGGHMRRH 116
+ H C+IC F+ GQALGGHMR H
Sbjct: 205 LVSGMNHRCNICSRVFSSGQALGGHMRCH 233
>AT4G35280.1 | chr4:16787429-16788283 REVERSE LENGTH=285
Length = 284
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 43/83 (51%), Gaps = 17/83 (20%)
Query: 51 FECKTCNRQFPSFQALGGHRASHKKPR------LADGDPAAEAPA-----KPKV------ 93
FEC C + F S QALGGHRASHK + DP + + + K+
Sbjct: 162 FECGGCKKVFGSHQALGGHRASHKNVKGCFAITNVTDDPMTVSTSSGHDHQGKILTFSGH 221
Query: 94 HGCSICGLEFAVGQALGGHMRRH 116
H C+IC F+ GQALGGHMR H
Sbjct: 222 HKCNICFRVFSSGQALGGHMRCH 244
>AT3G29340.1 | chr3:11259587-11262440 REVERSE LENGTH=651
Length = 650
Score = 48.9 bits (115), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 12/79 (15%)
Query: 52 ECKTCNRQFPSFQALGGHRASHK--KPRLADGDPAAEAPAKPKV----------HGCSIC 99
+CK C + F +QALGGH+ H+ K +L+ + + P K K+ + C +C
Sbjct: 44 KCKICGKSFECYQALGGHQRIHRPIKEKLSKQEFSEVYPRKSKLQKRPESSSSCYECKVC 103
Query: 100 GLEFAVGQALGGHMRRHRA 118
G F + LGGH + HR+
Sbjct: 104 GKIFGCYRGLGGHTKLHRS 122
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.321 0.136 0.420
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 3,412,508
Number of extensions: 103651
Number of successful extensions: 432
Number of sequences better than 1.0e-05: 25
Number of HSP's gapped: 398
Number of HSP's successfully gapped: 29
Length of query: 191
Length of database: 11,106,569
Length adjustment: 93
Effective length of query: 98
Effective length of database: 8,556,881
Effective search space: 838574338
Effective search space used: 838574338
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 109 (46.6 bits)