BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0278300 Os03g0278300|AK064165
(238 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G59950.5 | chr5:24140235-24141504 FORWARD LENGTH=246 169 1e-42
AT5G02530.1 | chr5:564332-565776 REVERSE LENGTH=293 160 5e-40
AT1G66260.1 | chr1:24695895-24697883 REVERSE LENGTH=296 122 2e-28
AT5G37720.1 | chr5:14981805-14983978 REVERSE LENGTH=289 119 1e-27
AT3G10400.1 | chr3:3232636-3233421 FORWARD LENGTH=262 55 5e-08
AT2G23350.1 | chr2:9943209-9946041 FORWARD LENGTH=663 54 6e-08
AT2G37220.1 | chr2:15634980-15636331 REVERSE LENGTH=290 54 7e-08
AT3G08000.1 | chr3:2555034-2555829 REVERSE LENGTH=144 52 2e-07
AT1G71770.1 | chr1:26990777-26993489 REVERSE LENGTH=683 52 2e-07
AT2G36660.1 | chr2:15361476-15364398 REVERSE LENGTH=610 51 4e-07
AT2G35410.1 | chr2:14898341-14899590 FORWARD LENGTH=309 50 1e-06
AT4G34110.1 | chr4:16336732-16339892 FORWARD LENGTH=630 50 1e-06
AT5G44200.1 | chr5:17802062-17803875 REVERSE LENGTH=258 50 1e-06
AT3G53460.4 | chr3:19819738-19821423 REVERSE LENGTH=364 49 2e-06
AT1G22760.1 | chr1:8055599-8058799 FORWARD LENGTH=661 48 6e-06
AT1G34140.1 | chr1:12433356-12434735 REVERSE LENGTH=408 47 7e-06
>AT5G59950.5 | chr5:24140235-24141504 FORWARD LENGTH=246
Length = 245
Score = 169 bits (427), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 79/115 (68%), Positives = 93/115 (80%), Gaps = 4/115 (3%)
Query: 31 PYQPPKAPESAWQHDMYSDVAAXXXXXXXXXXRVSAIETGTKLYISNLDFGVSTEDIKEL 90
PYQ KAPES W HDM+SD + + IETGTKLYISNLD+GV EDIKEL
Sbjct: 52 PYQSAKAPESTWGHDMFSDRSEDHRSGRSS----AGIETGTKLYISNLDYGVMNEDIKEL 107
Query: 91 FSELGDLKKYVIHYDRSGRSKGTAEVVFARRGDAVAAVKKYNNVQLDGKPMKIEI 145
F+E+G+LK+Y +H+DRSGRSKGTAEVV++RRGDA+AAVKKYN+VQLDGKPMKIEI
Sbjct: 108 FAEVGELKRYTVHFDRSGRSKGTAEVVYSRRGDALAAVKKYNDVQLDGKPMKIEI 162
>AT5G02530.1 | chr5:564332-565776 REVERSE LENGTH=293
Length = 292
Score = 160 bits (405), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 80/123 (65%), Positives = 96/123 (78%), Gaps = 4/123 (3%)
Query: 27 PSAGPYQPPKAPESAWQHDMYSDVAAXXXXXXXXXXRV----SAIETGTKLYISNLDFGV 82
P + P Q +A ++ WQ+D+++ A+ V S+IETGTKLYISNLD+GV
Sbjct: 60 PYSRPIQQQQAHDAMWQNDVFATDASVAAAFGHHQTAVVGGGSSIETGTKLYISNLDYGV 119
Query: 83 STEDIKELFSELGDLKKYVIHYDRSGRSKGTAEVVFARRGDAVAAVKKYNNVQLDGKPMK 142
S EDIKELFSE+GDLK+Y IHYDRSGRSKGTAEVVF+RRGDA+AAVK+YNNVQLDGK MK
Sbjct: 120 SNEDIKELFSEVGDLKRYGIHYDRSGRSKGTAEVVFSRRGDALAAVKRYNNVQLDGKLMK 179
Query: 143 IEI 145
IEI
Sbjct: 180 IEI 182
>AT1G66260.1 | chr1:24695895-24697883 REVERSE LENGTH=296
Length = 295
Score = 122 bits (305), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 70/82 (85%)
Query: 64 VSAIETGTKLYISNLDFGVSTEDIKELFSELGDLKKYVIHYDRSGRSKGTAEVVFARRGD 123
VS +E GT +YI+NLD GV+ EDI+EL++E+G+LK+Y IHYD++GR G+AEVV+ RR D
Sbjct: 100 VSGVEVGTTVYITNLDQGVTNEDIRELYAEIGELKRYAIHYDKNGRPSGSAEVVYMRRSD 159
Query: 124 AVAAVKKYNNVQLDGKPMKIEI 145
A+ A++KYNNV LDG+PMK+EI
Sbjct: 160 AIQAMRKYNNVLLDGRPMKLEI 181
>AT5G37720.1 | chr5:14981805-14983978 REVERSE LENGTH=289
Length = 288
Score = 119 bits (299), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 53/104 (50%), Positives = 74/104 (71%), Gaps = 8/104 (7%)
Query: 42 WQHDMYSDVAAXXXXXXXXXXRVSAIETGTKLYISNLDFGVSTEDIKELFSELGDLKKYV 101
WQ ++ D S +E GT+L+++NLD GV+ EDI+ELFSE+G++++Y
Sbjct: 72 WQSGLFED--------GLRAAGASGVEVGTRLHVTNLDQGVTNEDIRELFSEIGEVERYA 123
Query: 102 IHYDRSGRSKGTAEVVFARRGDAVAAVKKYNNVQLDGKPMKIEI 145
IHYD++GR GTAEVV+ RR DA A+KKYNNV LDG+PM++EI
Sbjct: 124 IHYDKNGRPSGTAEVVYPRRSDAFQALKKYNNVLLDGRPMRLEI 167
>AT3G10400.1 | chr3:3232636-3233421 FORWARD LENGTH=262
Length = 261
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 71 TKLYISNLDFGVSTEDIKELFSELGDLKKYVIHYDRSGR-SKGTAEVVFARRGDAVAAVK 129
+ LY+SNLDF ++ DI LFS G + + + DR R S+G A V++ R DA A +
Sbjct: 57 STLYVSNLDFSLTNSDIHTLFSTFGKVARVTVLKDRHTRQSRGVAFVLYVSREDAAKAAR 116
Query: 130 KYNNVQLDGKPMKIEI 145
+ L+G+ + + I
Sbjct: 117 SMDAKILNGRKLTVSI 132
>AT2G23350.1 | chr2:9943209-9946041 FORWARD LENGTH=663
Length = 662
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 42/76 (55%)
Query: 70 GTKLYISNLDFGVSTEDIKELFSELGDLKKYVIHYDRSGRSKGTAEVVFARRGDAVAAVK 129
G LY+ NLD V+ E ++ELF+E G + + D SG SKG+ V F+ +A +
Sbjct: 327 GLNLYVKNLDDTVTDEKLRELFAEFGTITSCKVMRDPSGTSKGSGFVAFSAASEASRVLN 386
Query: 130 KYNNVQLDGKPMKIEI 145
+ N + GKP+ + +
Sbjct: 387 EMNGKMVGGKPLYVAL 402
>AT2G37220.1 | chr2:15634980-15636331 REVERSE LENGTH=290
Length = 289
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
Query: 72 KLYISNLDFGVSTEDIKELFSELGDLKKYVIHYDR-SGRSKGTAEVVFARRGDAVAAVKK 130
KL++ NL F V + + +LF G+++ + YD+ +GRS+G V + + AA ++
Sbjct: 92 KLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFGFVTMSSVSEVEAAAQQ 151
Query: 131 YNNVQLDGKPMKI 143
+N +LDG+P+++
Sbjct: 152 FNGYELDGRPLRV 164
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 71 TKLYISNLDFGVSTEDIKELFSELGDLKKYVIHYDR-SGRSKGTAEVVFARRGDAVAAVK 129
++Y+ NL +GV ++ LFSE G + + + YDR SGRSKG V + + A+K
Sbjct: 204 NRVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSSQEVQNAIK 263
Query: 130 KYNNVQLDGKPMKI 143
+ LDG+ +++
Sbjct: 264 SLDGADLDGRQIRV 277
>AT3G08000.1 | chr3:2555034-2555829 REVERSE LENGTH=144
Length = 143
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Query: 72 KLYISNLDFGVSTEDIKELFSELGDLKKYVIHYDR-SGRSKGTAEVVFARRGDAVAAVKK 130
KL+I L + V + +K+ FS G++ + I YD+ SGRS+G V FA GDA++A
Sbjct: 42 KLFIGGLSWSVDEQSLKDAFSSFGEVAEVRIAYDKGSGRSRGFGFVDFAEEGDALSAKDA 101
Query: 131 YNNVQLDGKPMKI 143
+ L G+P++I
Sbjct: 102 MDGKGLLGRPLRI 114
>AT1G71770.1 | chr1:26990777-26993489 REVERSE LENGTH=683
Length = 682
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
Query: 63 RVSAIE--TGTKLYISNLDFGVSTEDIKELFSELGDLKKYVIHYDRSGRSKGTAEVVFAR 120
R+S E G+ LY+ NLD V+ E +KE+FSE G++ + + G S+G V ++
Sbjct: 332 RISRFEKLQGSNLYLKNLDDSVNDEKLKEMFSEYGNVTSCKVMMNSQGLSRGFGFVAYSN 391
Query: 121 RGDAVAAVKKYNNVQLDGKPMKIEI 145
+A+ A+K+ N + KP+ + +
Sbjct: 392 PEEALLAMKEMNGKMIGRKPLYVAL 416
>AT2G36660.1 | chr2:15361476-15364398 REVERSE LENGTH=610
Length = 609
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 43/75 (57%)
Query: 71 TKLYISNLDFGVSTEDIKELFSELGDLKKYVIHYDRSGRSKGTAEVVFARRGDAVAAVKK 130
+ +Y+ N++ V+ E++++ FS+ G + + D G+SKG V F+ +A+ AVK
Sbjct: 304 SNIYVKNVNVAVTEEELRKHFSQCGTITSTKLMCDEKGKSKGFGFVCFSTPEEAIDAVKT 363
Query: 131 YNNVQLDGKPMKIEI 145
++ GKP+ + I
Sbjct: 364 FHGQMFHGKPLYVAI 378
>AT2G35410.1 | chr2:14898341-14899590 FORWARD LENGTH=309
Length = 308
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 41/72 (56%)
Query: 72 KLYISNLDFGVSTEDIKELFSELGDLKKYVIHYDRSGRSKGTAEVVFARRGDAVAAVKKY 131
KL++ NL + +S DI ELF + G + I + G+++G A V A +A AA+ K+
Sbjct: 96 KLFVFNLPWSMSVNDISELFGQCGTVNNVEIIRQKDGKNRGFAFVTMASGEEAQAAIDKF 155
Query: 132 NNVQLDGKPMKI 143
+ Q+ G+ + +
Sbjct: 156 DTFQVSGRIISV 167
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Query: 68 ETGTKLYISNLDFGVSTEDIKELFS--ELGDLKKYVIHYDRSGRSKGTAEVVFARRGDAV 125
+T KLY+SNL + + ++ELF+ + + V+ D GRS G V FA R +A
Sbjct: 191 DTRHKLYVSNLAWKARSTHLRELFTAADFNPVSARVVFADPEGRSSGYGFVSFATREEAE 250
Query: 126 AAVKKYNNVQLDGKPMKIEI 145
A+ K N ++ G+P+ ++
Sbjct: 251 NAITKLNGKEIMGRPITLKF 270
>AT4G34110.1 | chr4:16336732-16339892 FORWARD LENGTH=630
Length = 629
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 42/75 (56%)
Query: 71 TKLYISNLDFGVSTEDIKELFSELGDLKKYVIHYDRSGRSKGTAEVVFARRGDAVAAVKK 130
+ LY+ NLD +S E +KE+FS G + + D +G SKG+ V FA +A A+ +
Sbjct: 318 SNLYVKNLDPSISDEKLKEIFSPFGTVTSSKVMRDPNGTSKGSGFVAFATPEEATEAMSQ 377
Query: 131 YNNVQLDGKPMKIEI 145
+ ++ KP+ + I
Sbjct: 378 LSGKMIESKPLYVAI 392
>AT5G44200.1 | chr5:17802062-17803875 REVERSE LENGTH=258
Length = 257
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
Query: 66 AIETGTKLYISNLDFGVSTEDIKELFSELGDLKKYVIHYDRSGRS-KGTAEVVFARRGDA 124
A+ T +YI N+ F + E + ELFS G++KK ++ D++ ++ G V+F R D
Sbjct: 29 ALRASTTVYIGNVSFYTTEEQLYELFSRAGEIKKIIMGLDKNTKTPCGFCFVLFYSREDT 88
Query: 125 VAAVKKYNNVQLDGKPMKIEI 145
AVK + LD +P++++
Sbjct: 89 EDAVKYISGTILDDRPIRVDF 109
>AT3G53460.4 | chr3:19819738-19821423 REVERSE LENGTH=364
Length = 363
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 71 TKLYISNLDFGVSTEDIKELFSELGDLKKYVIHYDR-SGRSKGTAEVVFARRGDAVAAVK 129
+LY+ NL +GV ++ LF+E G + + + YDR SGRSKG V + + A+
Sbjct: 278 NRLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAIN 337
Query: 130 KYNNVQLDGKPMKI 143
N LDG+ +++
Sbjct: 338 SLNGADLDGRQIRV 351
>AT1G22760.1 | chr1:8055599-8058799 FORWARD LENGTH=661
Length = 660
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 41/76 (53%)
Query: 70 GTKLYISNLDFGVSTEDIKELFSELGDLKKYVIHYDRSGRSKGTAEVVFARRGDAVAAVK 129
G LY+ NLD V E +KE+FSE G++ + + G S+G V ++ +A+ A+
Sbjct: 331 GANLYLKNLDDSVDDEKLKEMFSEYGNVTSSKVMLNPQGMSRGFGFVAYSNPEEALRALS 390
Query: 130 KYNNVQLDGKPMKIEI 145
+ N + KP+ I +
Sbjct: 391 EMNGKMIGRKPLYIAL 406
>AT1G34140.1 | chr1:12433356-12434735 REVERSE LENGTH=408
Length = 407
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 38/76 (50%)
Query: 70 GTKLYISNLDFGVSTEDIKELFSELGDLKKYVIHYDRSGRSKGTAEVVFARRGDAVAAVK 129
G LY+ NLD V ++ELFSE G + + +G SKG V F+ +A A+
Sbjct: 222 GMNLYVKNLDDSVDNTKLEELFSEFGTITSCKVMVHSNGISKGVGFVEFSTSEEASKAML 281
Query: 130 KYNNVQLDGKPMKIEI 145
K N + KP+ + +
Sbjct: 282 KMNGKMVGNKPIYVSL 297
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.311 0.127 0.356
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 3,676,016
Number of extensions: 123277
Number of successful extensions: 602
Number of sequences better than 1.0e-05: 16
Number of HSP's gapped: 625
Number of HSP's successfully gapped: 19
Length of query: 238
Length of database: 11,106,569
Length adjustment: 96
Effective length of query: 142
Effective length of database: 8,474,633
Effective search space: 1203397886
Effective search space used: 1203397886
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 110 (47.0 bits)