BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0268400 Os03g0268400|AK121972
(361 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G39770.1 | chr2:16589401-16590741 FORWARD LENGTH=362 663 0.0
AT3G55590.1 | chr3:20617479-20618881 FORWARD LENGTH=365 617 e-177
AT4G30570.1 | chr4:14930706-14931951 REVERSE LENGTH=332 504 e-143
AT1G74910.1 | chr1:28135770-28138456 REVERSE LENGTH=416 197 9e-51
AT2G04650.1 | chr2:1621986-1624486 REVERSE LENGTH=407 194 9e-50
AT4G18300.1 | chr4:10118852-10120981 FORWARD LENGTH=710 57 2e-08
AT2G34970.1 | chr2:14746340-14748532 FORWARD LENGTH=731 53 3e-07
AT3G02270.1 | chr3:448977-451007 REVERSE LENGTH=677 50 3e-06
>AT2G39770.1 | chr2:16589401-16590741 FORWARD LENGTH=362
Length = 361
Score = 663 bits (1711), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 316/361 (87%), Positives = 341/361 (94%)
Query: 1 MKALILVGGFGTRLRPLTLSVPKPLVDFGNKPMILHQIEALKEVGVTEVVLAINYQPEVM 60
MKALILVGGFGTRLRPLTLS PKPLVDF NKPMILHQIEALK VGV EVVLAINYQPEVM
Sbjct: 1 MKALILVGGFGTRLRPLTLSFPKPLVDFANKPMILHQIEALKAVGVDEVVLAINYQPEVM 60
Query: 61 LNFLKDFESKLGIKITCSQETEPLGTAGPLALARDKLADGSGDPFFVLNSDVISEYPFAE 120
LNFLKDFE+KL IKITCSQETEPLGTAGPLALARDKL DGSG+PFFVLNSDVISEYP E
Sbjct: 61 LNFLKDFETKLEIKITCSQETEPLGTAGPLALARDKLLDGSGEPFFVLNSDVISEYPLKE 120
Query: 121 LIQFHKSHGGEATIMVTKVDEPSKYGVVVMEDETDKVERFVEKPKVFVGNKINAGIYLLN 180
+++FHKSHGGEA+IMVTKVDEPSKYGVVVME+ T +VE+FVEKPK++VGNKINAGIYLLN
Sbjct: 121 MLEFHKSHGGEASIMVTKVDEPSKYGVVVMEESTGRVEKFVEKPKLYVGNKINAGIYLLN 180
Query: 181 PSVLDRIELKPTSIEKEVFPRIAADNGLFAMVLPGFWMDIGQPRDYITGLRLYLDSLRKK 240
PSVLD+IEL+PTSIEKE FP+IAA GL+AMVLPGFWMDIGQPRDYITGLRLYLDSLRKK
Sbjct: 181 PSVLDKIELRPTSIEKETFPKIAAAQGLYAMVLPGFWMDIGQPRDYITGLRLYLDSLRKK 240
Query: 241 APAKLASGAHVLGNVLVHETAVIGEGCLIGPDVAVGPGCVVEAGVRLSRCTVMRGARVKK 300
+PAKL SG H++GNVLV ETA IGEGCLIGPDVA+GPGC+VE+GVRLSRCTVMRG R+KK
Sbjct: 241 SPAKLTSGPHIVGNVLVDETATIGEGCLIGPDVAIGPGCIVESGVRLSRCTVMRGVRIKK 300
Query: 301 HACISSSIIGWHSTVGMWARVENMTILGEDVHVCDEVYSNGGVVLPHKEIKSSILKPEIV 360
HACISSSIIGWHSTVG WAR+ENMTILGEDVHV DE+YSNGGVVLPHKEIKS+ILKPEIV
Sbjct: 301 HACISSSIIGWHSTVGQWARIENMTILGEDVHVSDEIYSNGGVVLPHKEIKSNILKPEIV 360
Query: 361 M 361
M
Sbjct: 361 M 361
>AT3G55590.1 | chr3:20617479-20618881 FORWARD LENGTH=365
Length = 364
Score = 617 bits (1590), Expect = e-177, Method: Compositional matrix adjust.
Identities = 298/364 (81%), Positives = 330/364 (90%), Gaps = 3/364 (0%)
Query: 1 MKALILVGGFGTRLRPLTLSVPKPLVDFGNKPMILHQIEALKEVGVTEVVLAINYQPE-- 58
MKALILVGGFGTRLRPLTLS+PKPLVDF NKPMILHQIEALK +GV EVVLAINY+PE
Sbjct: 1 MKALILVGGFGTRLRPLTLSLPKPLVDFANKPMILHQIEALKAIGVDEVVLAINYEPEQL 60
Query: 59 -VMLNFLKDFESKLGIKITCSQETEPLGTAGPLALARDKLADGSGDPFFVLNSDVISEYP 117
VM F D E+ LGIKITCSQETEPLGTAGPLALARDKL DGSG PFFVLNSDVIS+YP
Sbjct: 61 LVMSKFSNDVEATLGIKITCSQETEPLGTAGPLALARDKLVDGSGQPFFVLNSDVISDYP 120
Query: 118 FAELIQFHKSHGGEATIMVTKVDEPSKYGVVVMEDETDKVERFVEKPKVFVGNKINAGIY 177
E+I FH +HGGEA+IMVTKVDEPSKYGVVVME+ T +VERFVEKPK+FVGNKINAGIY
Sbjct: 121 LEEMIAFHNAHGGEASIMVTKVDEPSKYGVVVMEEATGRVERFVEKPKLFVGNKINAGIY 180
Query: 178 LLNPSVLDRIELKPTSIEKEVFPRIAADNGLFAMVLPGFWMDIGQPRDYITGLRLYLDSL 237
LLNPSVLDRIEL+PTSIEKE+FP+IA L+AM+LPGFWMDIGQPRDYITGLRLYLDSL
Sbjct: 181 LLNPSVLDRIELRPTSIEKEIFPQIAEAEKLYAMLLPGFWMDIGQPRDYITGLRLYLDSL 240
Query: 238 RKKAPAKLASGAHVLGNVLVHETAVIGEGCLIGPDVAVGPGCVVEAGVRLSRCTVMRGAR 297
RKK+P+KLA+G H+LGNVLV ETA IGEGCLIGP+VA+GPGCVVE+GVRLS CTVMRG
Sbjct: 241 RKKSPSKLATGPHILGNVLVDETAEIGEGCLIGPNVAIGPGCVVESGVRLSHCTVMRGVH 300
Query: 298 VKKHACISSSIIGWHSTVGMWARVENMTILGEDVHVCDEVYSNGGVVLPHKEIKSSILKP 357
VK++ACISSSIIGWHSTVG WARVENM+ILG++V+VCDE+Y NGGVVL +KEIKS ILKP
Sbjct: 301 VKRYACISSSIIGWHSTVGQWARVENMSILGKNVYVCDEIYCNGGVVLHNKEIKSDILKP 360
Query: 358 EIVM 361
+IVM
Sbjct: 361 DIVM 364
>AT4G30570.1 | chr4:14930706-14931951 REVERSE LENGTH=332
Length = 331
Score = 504 bits (1297), Expect = e-143, Method: Compositional matrix adjust.
Identities = 242/329 (73%), Positives = 287/329 (87%), Gaps = 1/329 (0%)
Query: 21 VPKPLVDFGNKPMILHQIEALKEVGVTEVVLAINYQ-PEVMLNFLKDFESKLGIKITCSQ 79
+PKPLVDFGNKPMILHQIEALK GVTEVVLAIN+Q PEVMLNF+K++E KL IKIT SQ
Sbjct: 1 MPKPLVDFGNKPMILHQIEALKGAGVTEVVLAINHQQPEVMLNFVKEYEKKLEIKITFSQ 60
Query: 80 ETEPLGTAGPLALARDKLADGSGDPFFVLNSDVISEYPFAELIQFHKSHGGEATIMVTKV 139
ETEPLGTAGPLALARDKL D SG PFFVLNSDVI EYP E+I+FHK++ EA+IMVT+V
Sbjct: 61 ETEPLGTAGPLALARDKLVDESGQPFFVLNSDVICEYPLLEMIEFHKTNRAEASIMVTEV 120
Query: 140 DEPSKYGVVVMEDETDKVERFVEKPKVFVGNKINAGIYLLNPSVLDRIELKPTSIEKEVF 199
D+PSKYGVVV E+ T +VE FVEKPK FVGNKINAGIYLL+PSVLDRIEL+ TSIEKE+F
Sbjct: 121 DDPSKYGVVVTEEGTARVESFVEKPKHFVGNKINAGIYLLSPSVLDRIELRRTSIEKEIF 180
Query: 200 PRIAADNGLFAMVLPGFWMDIGQPRDYITGLRLYLDSLRKKAPAKLASGAHVLGNVLVHE 259
P+IA++ L+AMVLPGFWMDIGQP+DYITG R+YL+SLR+K P +LA+G +++GNVLVHE
Sbjct: 181 PKIASEKKLYAMVLPGFWMDIGQPKDYITGQRMYLNSLREKTPQELATGDNIIGNVLVHE 240
Query: 260 TAVIGEGCLIGPDVAVGPGCVVEAGVRLSRCTVMRGARVKKHACISSSIIGWHSTVGMWA 319
+AVIGEGCLIGPDV +GPGCV+++GVRL CTVMRG +K+HACIS+SI+GW STVG WA
Sbjct: 241 SAVIGEGCLIGPDVVIGPGCVIDSGVRLFGCTVMRGVWIKEHACISNSIVGWDSTVGRWA 300
Query: 320 RVENMTILGEDVHVCDEVYSNGGVVLPHK 348
RV N+T+LG+DV+V D N GVV+ +
Sbjct: 301 RVFNITVLGKDVNVADAEVYNSGVVIEEQ 329
>AT1G74910.1 | chr1:28135770-28138456 REVERSE LENGTH=416
Length = 415
Score = 197 bits (500), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 121/406 (29%), Positives = 210/406 (51%), Gaps = 48/406 (11%)
Query: 3 ALILVGG--FGTRLRPLTLSVPKPLVDFGNKPMILHQIEALKEV-GVTEVVLAINYQPEV 59
A+I+VGG GTR RPL+L++PKPL +PM+ H I A K + + ++ L Y+
Sbjct: 11 AVIMVGGPTKGTRFRPLSLNIPKPLFPIAGQPMVHHPISACKRIPNLAQIYLVGFYEERE 70
Query: 60 MLNFLKDFESKLGIKITCSQETEPLGTAGPLALARDKLADGSGDPFFVLNSDVISEYPFA 119
++ ++L + + +E +P G+AG L R+ + + S F+LN DV +P
Sbjct: 71 FALYVSAISNELKVPVRYLREDKPHGSAGGLYHFRNLIMEDSPSHIFLLNCDVCCSFPLP 130
Query: 120 ELIQFHKSHGGEATIMVTKV--DEPSKYGVVVMEDETDKVERFVEKPKVFVGNKINAGIY 177
++++ H+ +GG T++V KV + S++G +V + T+++ + EKP+ FV ++IN G+Y
Sbjct: 131 KMLEAHRGYGGIGTLLVIKVSPESASQFGELVADPVTNELLHYTEKPETFVSDRINCGVY 190
Query: 178 LLNPSVL-----------DRIELKPTS-----------------IEKEVFPRIAADNGLF 209
+ P + DR LK S +++++ +A L+
Sbjct: 191 VFTPEIFNAIGDVSTQRKDRATLKRVSSFEALQPATRIPTDFVRLDQDILSPLAGKKRLY 250
Query: 210 AMVLPGFWMDIGQPRDYITGLRLYLDSLRKKAPAKLASG-----AHVLGNVLVHETAVIG 264
FW I P + LYL R +P LASG A V+G+V +H +A +
Sbjct: 251 TYETMDFWEQIKSPGMSLRCSGLYLSQFRLTSPQLLASGDGTRSAIVIGDVYIHPSAKVH 310
Query: 265 EGCLIGPDVAVGPGCVVEAGVRLSRCTVMRGARVKKHACISSSIIGWHSTVGMWARVE-- 322
IGP+V++ V GVRL C ++ + ++A ++++I+GW S++G W+RV+
Sbjct: 311 PTAKIGPNVSISANARVGPGVRLMSCIILDDVEIMENAVVTNAIVGWKSSIGRWSRVQAE 370
Query: 323 -------NMTILGEDVHVCDEVYSNGGVVLPHKEIKSSILKPEIVM 361
+TILG+ V V DEV +VLP+K + S+ + EI++
Sbjct: 371 GVYNSKLGVTILGDSVAVEDEVVVTSSIVLPNKTLNVSV-QDEIIL 415
>AT2G04650.1 | chr2:1621986-1624486 REVERSE LENGTH=407
Length = 406
Score = 194 bits (492), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 118/393 (30%), Positives = 202/393 (51%), Gaps = 41/393 (10%)
Query: 3 ALILVGG--FGTRLRPLTLSVPKPLVDFGNKPMILHQIEALKEV-GVTEVVLAINYQPEV 59
A+I+VGG GTR RPL+ + PKPL+ +PMI H I A K++ + ++ L Y+
Sbjct: 8 AVIMVGGPTKGTRFRPLSFNTPKPLIPLAGQPMIHHPISACKKISNLAQIFLIGFYEERE 67
Query: 60 MLNFLKDFESKLGIKITCSQETEPLGTAGPLALARDKLADGSGDPFFVLNSDVISEYPFA 119
++ ++L I + +E +P G+AG L RD++ + F+LN DV +P
Sbjct: 68 FALYVSSISNELKIPVRYLKEDKPHGSAGALYYFRDRIMEEKPSHVFLLNCDVCCSFPLQ 127
Query: 120 ELIQFHKSHGGEATIMVTKV--DEPSKYGVVVMEDETDKVERFVEKPKVFVGNKINAGIY 177
++ H+ +GG T++V KV + S++G ++ + +T ++ + EKP+ FV + IN G+Y
Sbjct: 128 GILDAHRRYGGIGTMLVIKVSAEAASQFGELIADPDTKELLHYTEKPETFVSDLINCGVY 187
Query: 178 LLNPSVLDRIE-----LKPTS----------------IEKEVFPRIAADNGLFAMVLPGF 216
+ + + IE ++ TS +++++ +A L+ F
Sbjct: 188 VFTSDIFNAIEEVYSQIRDTSSNYQSATRSVPADFVRLDQDILSPLAGKKQLYTYENKDF 247
Query: 217 WMDIGQPRDYITGLRLYLDSLRKKAPAKLASG------AHVLGNVLVHETAVIGEGCLIG 270
W I P + LYL R+ +P LASG ++G+V +H + + IG
Sbjct: 248 WEQIKTPGKSLKCSALYLSQFRETSPHILASGDGTNRKPTIIGDVYIHPSVKLHPTAKIG 307
Query: 271 PDVAVGPGCVVEAGVRLSRCTVMRGARVKKHACISSSIIGWHSTVGMWARVE-------- 322
P+V++ V GVRL C ++ +K++A + +SIIGW S++G W+RV+
Sbjct: 308 PNVSISANVRVGPGVRLISCIILDDVEIKENAVVINSIIGWKSSIGRWSRVQASGDYNDR 367
Query: 323 -NMTILGEDVHVCDEVYSNGGVVLPHKEIKSSI 354
+TILGE V V DEV G +VL +K + S+
Sbjct: 368 LGITILGEAVTVEDEVAVIGSIVLQNKTLNVSV 400
>AT4G18300.1 | chr4:10118852-10120981 FORWARD LENGTH=710
Length = 709
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 69/155 (44%), Gaps = 8/155 (5%)
Query: 1 MKALILVGGFGTRLRPLTLSVPKPLVDFGNKPMILHQIEALKEVGVTEVVLAINYQPEVM 60
++A++L F T+ R +TL PK L+ N PMI + + L+ G+ EV + +
Sbjct: 24 LQAILLADSFTTQFRSITLERPKVLLPIVNIPMIDYTLAWLESAGIEEVFVFCCAHSSQI 83
Query: 61 LNFLKDFE------SKLGIKITCSQETEPLGTAGPLALARDKLADGSGDPFFVLNSDVIS 114
+++LK E L ++ S + +G A + F +++ D +S
Sbjct: 84 IDYLKKSEWYTRPNPNLLVRTIVSHNSTSVGDALRYIYEQQTETSQIQGDFVLVSGDTVS 143
Query: 115 EYPFAELIQFHKSH--GGEATIMVTKVDEPSKYGV 147
P A+LIQ H+ E IM + S+ G+
Sbjct: 144 NMPLADLIQQHRDRKKKDEKAIMTMVFKKQSRLGI 178
>AT2G34970.1 | chr2:14746340-14748532 FORWARD LENGTH=731
Length = 730
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 65/131 (49%), Gaps = 6/131 (4%)
Query: 1 MKALILVGGFGTRLRPLTLSVPKPLVDFGNKPMILHQIEALKEVGVTEVVLAINYQPEVM 60
++A++L F T+ RP+TL PK L+ N PMI + + L+ G+ EV + +
Sbjct: 25 LQAILLADSFATKFRPVTLERPKVLLPIVNVPMIDYTLAWLESAGIEEVFVFCCAHSMQV 84
Query: 61 LNFLKDFE--SKLGIKITCSQETEPLGTAGPLALARDKLADGS---GDPFFVLNSDVISE 115
+ +L+ E S + + + + + L ++ + S GD F +++ D +S
Sbjct: 85 IEYLEKSEWYSHPNLLVRTIESHKSISAGDALRYMYEQQTETSQIQGD-FVLVSGDTVSN 143
Query: 116 YPFAELIQFHK 126
P A+LIQ H+
Sbjct: 144 MPLADLIQEHR 154
>AT3G02270.1 | chr3:448977-451007 REVERSE LENGTH=677
Length = 676
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 58/131 (44%), Gaps = 8/131 (6%)
Query: 1 MKALILVGGFGTRLRPLTLSVPKPLVDFGNKPMILHQIEALKEVGVTEVVLAINYQPEVM 60
++A++L F T+L PLTL P L+ N PMI + + L+ G+ EV + + Q
Sbjct: 25 LQAILLADSFATKLLPLTLERPNVLLPLVNIPMIDYTLAWLESAGIEEVFVFCSMQVIDY 84
Query: 61 LN-----FLKDFESKLGIKITCSQETEPLGTAGPLALARDKLADGSGDPFFVLNSDVISE 115
LN KDF K I Q + G A + F ++N ++S
Sbjct: 85 LNNSDWYSHKDFTVK---TIESPQNSTSAGDALRYIYEQQIETSQIQGDFVLVNGCIVSN 141
Query: 116 YPFAELIQFHK 126
P +LIQ H+
Sbjct: 142 MPLTQLIQEHR 152
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.320 0.139 0.412
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 8,100,453
Number of extensions: 350827
Number of successful extensions: 771
Number of sequences better than 1.0e-05: 9
Number of HSP's gapped: 752
Number of HSP's successfully gapped: 9
Length of query: 361
Length of database: 11,106,569
Length adjustment: 100
Effective length of query: 261
Effective length of database: 8,364,969
Effective search space: 2183256909
Effective search space used: 2183256909
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 112 (47.8 bits)